| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is 120599013
Identifier: 120599013
GI number: 120599013
Start: 2549837
End: 2550973
Strand: Direct
Name: 120599013
Synonym: Sputw3181_2208
Alternate gene names: NA
Gene position: 2549837-2550973 (Clockwise)
Preceding gene: 120599012
Following gene: 120599014
Centisome position: 54.16
GC content: 40.37
Gene sequence:
>1137_bases ATGTTTCAAAGGCTATTGCAAAAACACCTTGCCAGAGGAATTCTTGGCAGAAAAATGTTATCTATCGACAAAGGTTCTAT TGCCTTAGCTTCAGATCTAGGTCTGAAGAGAACTGAGAATCAAGACAGAACCGCTTTAATGAAATTTAGATCTTCAACAG CTTCGTATACTGTCATAGCCGTAGTTGATGGAATGGGTGGTATGAGAGATGGGGAGAAGTCTGCTGAAATAGCTATTTCA ACTTTCTTGTGCTCTATTATGGAAAATGTTCATTTGGGTTCTGAACATGCAATAATGCAAGCCACGATGACTGCCAATAA CGCTGTATTCGAATTTACAAATGGTAAAGGTGGAAGTACCTTATCCGCAATTTTATTAGCTAGCGACGGCACTCATATGA CCGTTAATGTCGGGGACAGTCGAATTTATGCAAAGGAGTCTATCTTTGGCAAAGTAATTAGACTTACCGTTGATGATTCG TTAGCGGAAACCGTTGGAGGAAGCGGTACAGAATTATTGCAGTTCATAGGTATGGGGGAAGGAATTAGACCACACGTAGT TCCGCTGCCACTTGAAGCTAAGCAAGTATATCTGACAACTGATGGTGTCCATTACATTGAACCAAACACATTGTCTGATA TTATAAAACATGCAGAAAAAATCACTCAGGTTGTAGAGCGGTTGATAGCAACTGCACGTTGGTGTGGAGGCCCAGATAAC GCTACAGTTAGTGCTCTTGATTTAGAGCTATTAAACTTTGAGGAGTCCCTGGATGATGCCTCGATAGTGCAAATATCTGA TCCACATAGCTCTACACAATTCATATTCCCCCAATTTCAGTTGGAAAGTGAAGTATCTCTCCCAGAGACAAGTGTTCAAA CTCAAAATAATTCTATTAATACAGCTCAATCTGAGAAATCGGCTGCTCCTAGCAGAACCTCAACTTTGGTCGAAGAAAAA GAATCGATTACTGAAACAGTCAAAGTTGAAGCTAAAACCCCGCCTAAGAGAAAGAAACGTCAATCAAAGAAGGCTGTTGA TCATCTAGATTCCGCAGATGAAGTACAAATTAAGATGACCATTTTTGATGAAGCAGGTTGCGAAAGTCATGAGGTTGAAG ATGATGATTCCAAGTAG
Upstream 100 bases:
>100_bases TATTTTGCAGTTCGTGATTGGCTTGTTGTAAAAGTTGGTTTATATCCTACTTTACATGGTATTATTTCTTATGTATCAGT TGGCTATAGGACACATAACA
Downstream 100 bases:
>100_bases ATATGAACTCTGTGGTAACAACGATACTGGTGGTATGGGTGACATTCTCTATTGCAAAGACAAACATTTACAACGCGATG TCATAATTAAACTCTTAAAA
Product: protein phosphatase 2C domain-containing protein
Products: NA
Alternate protein names: C Domain-Containing Protein; Serine/Threonine Protein Phosphatase; Serine/Threonine Phosphatases; Serine/Threonine Phosphatase; C-Like Protein
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MFQRLLQKHLARGILGRKMLSIDKGSIALASDLGLKRTENQDRTALMKFRSSTASYTVIAVVDGMGGMRDGEKSAEIAIS TFLCSIMENVHLGSEHAIMQATMTANNAVFEFTNGKGGSTLSAILLASDGTHMTVNVGDSRIYAKESIFGKVIRLTVDDS LAETVGGSGTELLQFIGMGEGIRPHVVPLPLEAKQVYLTTDGVHYIEPNTLSDIIKHAEKITQVVERLIATARWCGGPDN ATVSALDLELLNFEESLDDASIVQISDPHSSTQFIFPQFQLESEVSLPETSVQTQNNSINTAQSEKSAAPSRTSTLVEEK ESITETVKVEAKTPPKRKKRQSKKAVDHLDSADEVQIKMTIFDEAGCESHEVEDDDSK
Sequences:
>Translated_378_residues MFQRLLQKHLARGILGRKMLSIDKGSIALASDLGLKRTENQDRTALMKFRSSTASYTVIAVVDGMGGMRDGEKSAEIAIS TFLCSIMENVHLGSEHAIMQATMTANNAVFEFTNGKGGSTLSAILLASDGTHMTVNVGDSRIYAKESIFGKVIRLTVDDS LAETVGGSGTELLQFIGMGEGIRPHVVPLPLEAKQVYLTTDGVHYIEPNTLSDIIKHAEKITQVVERLIATARWCGGPDN ATVSALDLELLNFEESLDDASIVQISDPHSSTQFIFPQFQLESEVSLPETSVQTQNNSINTAQSEKSAAPSRTSTLVEEK ESITETVKVEAKTPPKRKKRQSKKAVDHLDSADEVQIKMTIFDEAGCESHEVEDDDSK >Mature_378_residues MFQRLLQKHLARGILGRKMLSIDKGSIALASDLGLKRTENQDRTALMKFRSSTASYTVIAVVDGMGGMRDGEKSAEIAIS TFLCSIMENVHLGSEHAIMQATMTANNAVFEFTNGKGGSTLSAILLASDGTHMTVNVGDSRIYAKESIFGKVIRLTVDDS LAETVGGSGTELLQFIGMGEGIRPHVVPLPLEAKQVYLTTDGVHYIEPNTLSDIIKHAEKITQVVERLIATARWCGGPDN ATVSALDLELLNFEESLDDASIVQISDPHSSTQFIFPQFQLESEVSLPETSVQTQNNSINTAQSEKSAAPSRTSTLVEEK ESITETVKVEAKTPPKRKKRQSKKAVDHLDSADEVQIKMTIFDEAGCESHEVEDDDSK
Specific function: Unknown
COG id: COG0631
COG function: function code T; Serine/threonine protein phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41130; Mature: 41130
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFQRLLQKHLARGILGRKMLSIDKGSIALASDLGLKRTENQDRTALMKFRSSTASYTVIA CHHHHHHHHHHHHHHHHHHEECCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCEEEEE VVDGMGGMRDGEKSAEIAISTFLCSIMENVHLGSEHAIMQATMTANNAVFEFTNGKGGST EEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHEEEEEEECCCEEEEEECCCCCCE LSAILLASDGTHMTVNVGDSRIYAKESIFGKVIRLTVDDSLAETVGGSGTELLQFIGMGE EEEEEEECCCCEEEEEECCCEEEEHHHHCEEEEEEEECCHHHHHHCCCHHHHHHHHCCCC GIRPHVVPLPLEAKQVYLTTDGVHYIEPNTLSDIIKHAEKITQVVERLIATARWCGGPDN CCCCCEEECCCCCCEEEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC ATVSALDLELLNFEESLDDASIVQISDPHSSTQFIFPQFQLESEVSLPETSVQTQNNSIN CEEEEEEEEEHHHHHCCCCCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCC TAQSEKSAAPSRTSTLVEEKESITETVKVEAKTPPKRKKRQSKKAVDHLDSADEVQIKMT CCCCHHHCCCCHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEE IFDEAGCESHEVEDDDSK EEECCCCCCCCCCCCCCC >Mature Secondary Structure MFQRLLQKHLARGILGRKMLSIDKGSIALASDLGLKRTENQDRTALMKFRSSTASYTVIA CHHHHHHHHHHHHHHHHHHEECCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCEEEEE VVDGMGGMRDGEKSAEIAISTFLCSIMENVHLGSEHAIMQATMTANNAVFEFTNGKGGST EEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHEEEEEEECCCEEEEEECCCCCCE LSAILLASDGTHMTVNVGDSRIYAKESIFGKVIRLTVDDSLAETVGGSGTELLQFIGMGE EEEEEEECCCCEEEEEECCCEEEEHHHHCEEEEEEEECCHHHHHHCCCHHHHHHHHCCCC GIRPHVVPLPLEAKQVYLTTDGVHYIEPNTLSDIIKHAEKITQVVERLIATARWCGGPDN CCCCCEEECCCCCCEEEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC ATVSALDLELLNFEESLDDASIVQISDPHSSTQFIFPQFQLESEVSLPETSVQTQNNSIN CEEEEEEEEEHHHHHCCCCCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCC TAQSEKSAAPSRTSTLVEEKESITETVKVEAKTPPKRKKRQSKKAVDHLDSADEVQIKMT CCCCHHHCCCCHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEE IFDEAGCESHEVEDDDSK EEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA