Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120598922

Identifier: 120598922

GI number: 120598922

Start: 2435016

End: 2435462

Strand: Direct

Name: 120598922

Synonym: Sputw3181_2114

Alternate gene names: NA

Gene position: 2435016-2435462 (Clockwise)

Preceding gene: 120598920

Following gene: 120598926

Centisome position: 51.72

GC content: 38.7

Gene sequence:

>447_bases
ATGTGCTTTAGCATGCGTCACGCGCTGTATTTATTACAACAAGAAAATCGACTTTCATGCCAACTCGCCCGTGAACTCGT
GTCTCTTATCGAAACCGTTCCTTATCAGCAAACGACTCTCGAATTAAAACTGCTAGAGTTACTAGCCTGTACTCAACAAA
AAAATCACAGCTTAATTCAATTAATGCAAACAAGAGGATCTACTGAAGTTGAATCTCAAAGACAACGACAATTCCAATTT
TCACAGCGTTTAAGTCAACTAATAAGTGATTGGCAACAACATCGAGAAATGAATAAGCTTGATCAACAATTTATGCCACT
TCTAAGGTATTATTTGTGCGAATCACAATCTTTAGAACATGCATTTTACGACAAGATCATTCAACAAATTAGCCAAGCTA
CCAACGCCTCACCGGACCACAGTCAACGTGCACAAAACCAGACTTAG

Upstream 100 bases:

>100_bases
ACACGGGAGAAAAGGTCTTGATCTCAAACCAAAAACACGAGATCTAGATCACATTTGCACCTAAACAAGCCTGCTAAGCT
CGGGCAAATTTTGATAACTG

Downstream 100 bases:

>100_bases
GATAGTAACCCACACCACCTAATTTCAATGAAAGTGCTGCATCTCTCAGTGTTTTCAAGTTCACACTAGGAATAGCAATA
TCCATCGCCATGCCCTGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MCFSMRHALYLLQQENRLSCQLARELVSLIETVPYQQTTLELKLLELLACTQQKNHSLIQLMQTRGSTEVESQRQRQFQF
SQRLSQLISDWQQHREMNKLDQQFMPLLRYYLCESQSLEHAFYDKIIQQISQATNASPDHSQRAQNQT

Sequences:

>Translated_148_residues
MCFSMRHALYLLQQENRLSCQLARELVSLIETVPYQQTTLELKLLELLACTQQKNHSLIQLMQTRGSTEVESQRQRQFQF
SQRLSQLISDWQQHREMNKLDQQFMPLLRYYLCESQSLEHAFYDKIIQQISQATNASPDHSQRAQNQT
>Mature_148_residues
MCFSMRHALYLLQQENRLSCQLARELVSLIETVPYQQTTLELKLLELLACTQQKNHSLIQLMQTRGSTEVESQRQRQFQF
SQRLSQLISDWQQHREMNKLDQQFMPLLRYYLCESQSLEHAFYDKIIQQISQATNASPDHSQRAQNQT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17578; Mature: 17578

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCFSMRHALYLLQQENRLSCQLARELVSLIETVPYQQTTLELKLLELLACTQQKNHSLIQ
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHH
LMQTRGSTEVESQRQRQFQFSQRLSQLISDWQQHREMNKLDQQFMPLLRYYLCESQSLEH
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
AFYDKIIQQISQATNASPDHSQRAQNQT
HHHHHHHHHHHHHCCCCCCHHHHCCCCC
>Mature Secondary Structure
MCFSMRHALYLLQQENRLSCQLARELVSLIETVPYQQTTLELKLLELLACTQQKNHSLIQ
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHH
LMQTRGSTEVESQRQRQFQFSQRLSQLISDWQQHREMNKLDQQFMPLLRYYLCESQSLEH
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
AFYDKIIQQISQATNASPDHSQRAQNQT
HHHHHHHHHHHHHCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA