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The map label for this gene is ytfM [H]

Identifier: 120598919

GI number: 120598919

Start: 2428520

End: 2430385

Strand: Direct

Name: ytfM [H]

Synonym: Sputw3181_2111

Alternate gene names: 120598919

Gene position: 2428520-2430385 (Clockwise)

Preceding gene: 120598907

Following gene: 120598920

Centisome position: 51.58

GC content: 42.23

Gene sequence:

>1866_bases
ATGGAGCATAAAGTGCAGCGATTCTTGCAAATCACCTCATTATCTTTTCGTCTTTATTTGCTTGTTGGCCTGAGTCTAGT
GGCATCAGTAGCGACTGCCGACAATTTTTTGAAATTATCTGTCTCTGGTGTTGATGAAGCACTGCAACGTAATATCCTGG
CGCATTTAGGCTCTTTACCTGACTCAGATGTCCAACGCCGAGCCTTTTTATTTAATGTCGAGGACAATGTCACTACAGCC
TTAGAATCCATGGGGTATTACCATGGAAAAATTGAAGAAAAGCTGATTGAAAACGAAAAAGGCCCATGGGAACTAAAACT
GACAGTGTCAGCGGGAGAACCCACTAAGATTCAGTGGGTAGATATCAATTTTTCAGGTGAAATGCTTAATGATCGCGCTT
TCGATCAATGGTTATCTCAAGTCAATATCAAACCCGGCGATACCTTAAATCACGGTCATTACTCTGAATTAAAGTCCCAA
CTTGTTGCCCTCGCCCTCGCCAGAGGATATTTTGATGGCGAGTTCACACAATCACAAATTAAGATCAATCGCGATATTAA
TACCGCTCAAATCAGCCTACATTTCAATTCAGGCCAGCGCTATCGTTTTGGACAAGTGAGTTTTGATGGGCATACGTTAG
AACCGGATATTTTAACTAATCTCATTCCCTTTAAAGAAAATGCCTCCTATTCGACTCGTCGGGTCAGTTCCCTCAATCGC
CAATTACTGGACACGGGCTACTTCGCCAATATAAAAGTAATCCCACAAATTGATTTAGTTGAGGATAACCATATCCCTGT
TAAGGTTGAGTTAACGCCTAAGGCAAGCCATTCAATTGAACTGGGTCTGGGGGGAGATATAGGCCAGAGTGCAGATAATA
CTTTTGACCCAAGGGTTCGAGTCACTTGGCGTACTCCACAGATTAACAAGTATGGTCATTCCCAAGAAACCAGTTTGGAA
TGGTCACCCGATCGTCCTAAGTTTTTAACCACCTACACCATTCCGCTCACACATCCCTTGGATGATCAACTTAAAATCCG
CTTAGGATTATTGCGTGACAAATATGGTGTTACCCAAATTTATGAGCCAGAGAATCGAGATTTTCGCAATACAGGCCAAC
TTGAATCAACGAAATATTTACTTGGATTGCTTCGTCAACAACGGCTTGATAATCAATGGCTAATGAGCTACTCACTCGAT
GCTATTCGTGAAGAATATAATCAATCAGACACTGATTATTTTCCCACTTTCTATCTCGCTGGAATTAACTTTTCTAAAAC
AACCCGAGGAGATAACTCTCTCGATCCTAAATCGGGTTTTAGGCAAATCTATAGTCTCGACTATGCCGATCCTTATTTAG
GTTCTGAGACTCGTTTAGCACGACTACAAGCCAAATTTAAATGGATTGATACCTTCTTTGATAACCACAGAGTCGTTGCA
CGTATCGATTTAGCGGCGAACATTGCCAATGAAAATGAACTGGCTTTTATTCCGCCCTCACTTCGTTACTTTGCAGGTGG
CGATCAAACCGTACGCGGCTACGGGTATCAAGAACTCGGCCCTTATTTAGATTATATCGATACTGATGGTAGTACGAATC
GTGAAGTTATTGGTGGGCGTTATTTAATGGTCGGCAGTTTAGAATACCAATATTACCTCACGCCCACTTGGCGGCTCGGC
ACCTTTATCGATGCGGGAAACGCCTTTGATAATAATCAGTTTGAACCTGTTGTTTCTGTCGGTGGTGGTATTCACTGGAT
ATCTCCTATTGGCCCAATAAAATTAGATTTAGGAATAGGCTTGAAAGAAACTGATACCATTGAAAGGTCATGGCGGATCC
ACTTAACCATGGGGACTGAGCTATGA

Upstream 100 bases:

>100_bases
TCCCCTTAAACAGTAGCGTCCTTTGTAACCATTTCAATGACTAATTTCAATCATCTCCTTGCCTGTTGCTTTCATTCTGG
CGACAATAAAGGCACATCAC

Downstream 100 bases:

>100_bases
GCCACTCTAAGGTTAATGATAAAACCAACGAGCAAGTTGATGTGGCATCAATTGATTCAACAGGATCCGCTCAATCTGTT
CCTGTTTCGGGATTACAACG

Product: surface antigen (D15)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 621; Mature: 621

Protein sequence:

>621_residues
MEHKVQRFLQITSLSFRLYLLVGLSLVASVATADNFLKLSVSGVDEALQRNILAHLGSLPDSDVQRRAFLFNVEDNVTTA
LESMGYYHGKIEEKLIENEKGPWELKLTVSAGEPTKIQWVDINFSGEMLNDRAFDQWLSQVNIKPGDTLNHGHYSELKSQ
LVALALARGYFDGEFTQSQIKINRDINTAQISLHFNSGQRYRFGQVSFDGHTLEPDILTNLIPFKENASYSTRRVSSLNR
QLLDTGYFANIKVIPQIDLVEDNHIPVKVELTPKASHSIELGLGGDIGQSADNTFDPRVRVTWRTPQINKYGHSQETSLE
WSPDRPKFLTTYTIPLTHPLDDQLKIRLGLLRDKYGVTQIYEPENRDFRNTGQLESTKYLLGLLRQQRLDNQWLMSYSLD
AIREEYNQSDTDYFPTFYLAGINFSKTTRGDNSLDPKSGFRQIYSLDYADPYLGSETRLARLQAKFKWIDTFFDNHRVVA
RIDLAANIANENELAFIPPSLRYFAGGDQTVRGYGYQELGPYLDYIDTDGSTNREVIGGRYLMVGSLEYQYYLTPTWRLG
TFIDAGNAFDNNQFEPVVSVGGGIHWISPIGPIKLDLGIGLKETDTIERSWRIHLTMGTEL

Sequences:

>Translated_621_residues
MEHKVQRFLQITSLSFRLYLLVGLSLVASVATADNFLKLSVSGVDEALQRNILAHLGSLPDSDVQRRAFLFNVEDNVTTA
LESMGYYHGKIEEKLIENEKGPWELKLTVSAGEPTKIQWVDINFSGEMLNDRAFDQWLSQVNIKPGDTLNHGHYSELKSQ
LVALALARGYFDGEFTQSQIKINRDINTAQISLHFNSGQRYRFGQVSFDGHTLEPDILTNLIPFKENASYSTRRVSSLNR
QLLDTGYFANIKVIPQIDLVEDNHIPVKVELTPKASHSIELGLGGDIGQSADNTFDPRVRVTWRTPQINKYGHSQETSLE
WSPDRPKFLTTYTIPLTHPLDDQLKIRLGLLRDKYGVTQIYEPENRDFRNTGQLESTKYLLGLLRQQRLDNQWLMSYSLD
AIREEYNQSDTDYFPTFYLAGINFSKTTRGDNSLDPKSGFRQIYSLDYADPYLGSETRLARLQAKFKWIDTFFDNHRVVA
RIDLAANIANENELAFIPPSLRYFAGGDQTVRGYGYQELGPYLDYIDTDGSTNREVIGGRYLMVGSLEYQYYLTPTWRLG
TFIDAGNAFDNNQFEPVVSVGGGIHWISPIGPIKLDLGIGLKETDTIERSWRIHLTMGTEL
>Mature_621_residues
MEHKVQRFLQITSLSFRLYLLVGLSLVASVATADNFLKLSVSGVDEALQRNILAHLGSLPDSDVQRRAFLFNVEDNVTTA
LESMGYYHGKIEEKLIENEKGPWELKLTVSAGEPTKIQWVDINFSGEMLNDRAFDQWLSQVNIKPGDTLNHGHYSELKSQ
LVALALARGYFDGEFTQSQIKINRDINTAQISLHFNSGQRYRFGQVSFDGHTLEPDILTNLIPFKENASYSTRRVSSLNR
QLLDTGYFANIKVIPQIDLVEDNHIPVKVELTPKASHSIELGLGGDIGQSADNTFDPRVRVTWRTPQINKYGHSQETSLE
WSPDRPKFLTTYTIPLTHPLDDQLKIRLGLLRDKYGVTQIYEPENRDFRNTGQLESTKYLLGLLRQQRLDNQWLMSYSLD
AIREEYNQSDTDYFPTFYLAGINFSKTTRGDNSLDPKSGFRQIYSLDYADPYLGSETRLARLQAKFKWIDTFFDNHRVVA
RIDLAANIANENELAFIPPSLRYFAGGDQTVRGYGYQELGPYLDYIDTDGSTNREVIGGRYLMVGSLEYQYYLTPTWRLG
TFIDAGNAFDNNQFEPVVSVGGGIHWISPIGPIKLDLGIGLKETDTIERSWRIHLTMGTEL

Specific function: Unknown

COG id: COG0729

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0698 [H]

Homologues:

Organism=Escherichia coli, GI1790666, Length=615, Percent_Identity=32.0325203252033, Blast_Score=294, Evalue=9e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 70653; Mature: 70653

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHKVQRFLQITSLSFRLYLLVGLSLVASVATADNFLKLSVSGVDEALQRNILAHLGSLP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCC
DSDVQRRAFLFNVEDNVTTALESMGYYHGKIEEKLIENEKGPWELKLTVSAGEPTKIQWV
CCCCCCEEEEEECCCCHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEEEEECCCCCEEEEE
DINFSGEMLNDRAFDQWLSQVNIKPGDTLNHGHYSELKSQLVALALARGYFDGEFTQSQI
EEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEE
KINRDINTAQISLHFNSGQRYRFGQVSFDGHTLEPDILTNLIPFKENASYSTRRVSSLNR
EEECCCCEEEEEEEECCCCEEEEEEEEECCCEECHHHHHHCCCCCCCCCCHHHHHHHHHH
QLLDTGYFANIKVIPQIDLVEDNHIPVKVELTPKASHSIELGLGGDIGQSADNTFDPRVR
HHHHCCCEEEEEEEEEEEEEECCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCEEE
VTWRTPQINKYGHSQETSLEWSPDRPKFLTTYTIPLTHPLDDQLKIRLGLLRDKYGVTQI
EEEECCCCCCCCCCCCCCEEECCCCCCEEEEEEEEECCCCCCCEEEEEEEHCCCCCCCEE
YEPENRDFRNTGQLESTKYLLGLLRQQRLDNQWLMSYSLDAIREEYNQSDTDYFPTFYLA
ECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
GINFSKTTRGDNSLDPKSGFRQIYSLDYADPYLGSETRLARLQAKFKWIDTFFDNHRVVA
ECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEE
RIDLAANIANENELAFIPPSLRYFAGGDQTVRGYGYQELGPYLDYIDTDGSTNREVIGGR
EEEEEEECCCCCCEEEECCCCEEECCCCCEEECCCHHHHCCHHCEECCCCCCCCEEECCE
YLMVGSLEYQYYLTPTWRLGTFIDAGNAFDNNQFEPVVSVGGGIHWISPIGPIKLDLGIG
EEEEEEEEEEEEEECCEEECEEEECCCCCCCCCCCEEEECCCCEEEECCCCCEEEEECCC
LKETDTIERSWRIHLTMGTEL
CCCCCCCCCEEEEEEEECCCC
>Mature Secondary Structure
MEHKVQRFLQITSLSFRLYLLVGLSLVASVATADNFLKLSVSGVDEALQRNILAHLGSLP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCC
DSDVQRRAFLFNVEDNVTTALESMGYYHGKIEEKLIENEKGPWELKLTVSAGEPTKIQWV
CCCCCCEEEEEECCCCHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEEEEECCCCCEEEEE
DINFSGEMLNDRAFDQWLSQVNIKPGDTLNHGHYSELKSQLVALALARGYFDGEFTQSQI
EEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEE
KINRDINTAQISLHFNSGQRYRFGQVSFDGHTLEPDILTNLIPFKENASYSTRRVSSLNR
EEECCCCEEEEEEEECCCCEEEEEEEEECCCEECHHHHHHCCCCCCCCCCHHHHHHHHHH
QLLDTGYFANIKVIPQIDLVEDNHIPVKVELTPKASHSIELGLGGDIGQSADNTFDPRVR
HHHHCCCEEEEEEEEEEEEEECCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCEEE
VTWRTPQINKYGHSQETSLEWSPDRPKFLTTYTIPLTHPLDDQLKIRLGLLRDKYGVTQI
EEEECCCCCCCCCCCCCCEEECCCCCCEEEEEEEEECCCCCCCEEEEEEEHCCCCCCCEE
YEPENRDFRNTGQLESTKYLLGLLRQQRLDNQWLMSYSLDAIREEYNQSDTDYFPTFYLA
ECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
GINFSKTTRGDNSLDPKSGFRQIYSLDYADPYLGSETRLARLQAKFKWIDTFFDNHRVVA
ECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEE
RIDLAANIANENELAFIPPSLRYFAGGDQTVRGYGYQELGPYLDYIDTDGSTNREVIGGR
EEEEEEECCCCCCEEEECCCCEEECCCCCEEECCCHHHHCCHHCEECCCCCCCCEEECCE
YLMVGSLEYQYYLTPTWRLGTFIDAGNAFDNNQFEPVVSVGGGIHWISPIGPIKLDLGIG
EEEEEEEEEEEEEECCEEECEEEECCCCCCCCCCCEEEECCCCEEEECCCCCEEEEECCC
LKETDTIERSWRIHLTMGTEL
CCCCCCCCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]