Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120598857

Identifier: 120598857

GI number: 120598857

Start: 2358842

End: 2359018

Strand: Direct

Name: 120598857

Synonym: Sputw3181_2048

Alternate gene names: NA

Gene position: 2358842-2359018 (Clockwise)

Preceding gene: 120598856

Following gene: 120598858

Centisome position: 50.1

GC content: 42.94

Gene sequence:

>177_bases
ATGGATTACGGCACATTGCAAGGCATTTTAACGATCATTGTGATGCTGACCTTCGTCGGTATATTTGCTTGGGCATATAG
CTCGCGTCGTCAAAAATCCTTTGATGAAGCAGCTAACCTTGTGTTTTCTGACGAAGAAATAAACAAGGAATCGACGGACT
CAGGAGAGCATAAGTGA

Upstream 100 bases:

>100_bases
TTGCAGGCGCACAAAAGGCTGTAGAAGGTAAGACAGAAATGGAAGCCTTGATCGCATATCTTCAGTCTTTGGGTCACGCA
CTCAAATAAGGAGGCAAAAT

Downstream 100 bases:

>100_bases
TGAGTAGCTTCTGGAGTATTTGGATTACCGTACTCTCGTTAGTGGTGATCGCAGGTTGTTTTATTTTACTTAAAGTGTGT
TCTAAGAACACCACTGACGT

Product: Cbb3-type cytochrome oxidase component

Products: ferricytochrome c; H2O

Alternate protein names: Cytochrome C Oxidase Cbb3-Type CcoQ Subunit

Number of amino acids: Translated: 58; Mature: 58

Protein sequence:

>58_residues
MDYGTLQGILTIIVMLTFVGIFAWAYSSRRQKSFDEAANLVFSDEEINKESTDSGEHK

Sequences:

>Translated_58_residues
MDYGTLQGILTIIVMLTFVGIFAWAYSSRRQKSFDEAANLVFSDEEINKESTDSGEHK
>Mature_58_residues
MDYGTLQGILTIIVMLTFVGIFAWAYSSRRQKSFDEAANLVFSDEEINKESTDSGEHK

Specific function: Unknown

COG id: COG4736

COG function: function code O; Cbb3-type cytochrome oxidase, subunit 3

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.9.3.1

Molecular weight: Translated: 6561; Mature: 6561

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYGTLQGILTIIVMLTFVGIFAWAYSSRRQKSFDEAANLVFSDEEINKESTDSGEHK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCC
>Mature Secondary Structure
MDYGTLQGILTIIVMLTFVGIFAWAYSSRRQKSFDEAANLVFSDEEINKESTDSGEHK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ferrocytochrome c; O2

Specific reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA