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The map label for this gene is yjgH [H]

Identifier: 120598852

GI number: 120598852

Start: 2354387

End: 2354776

Strand: Direct

Name: yjgH [H]

Synonym: Sputw3181_2042

Alternate gene names: 120598852

Gene position: 2354387-2354776 (Clockwise)

Preceding gene: 120598850

Following gene: 120598853

Centisome position: 50.0

GC content: 47.44

Gene sequence:

>390_bases
ATGAAAAGAGAAGCTATTTTCCCAGCCAACAGACATGCACTTTATGAAGAGCATGGTTATTCCGCTGCAATTCGCTCAGG
TGATTTGCTCTTCGTTTCCGGCCAGGTGGGCAGCCGTGCTGACGGCAGCCCTGAAGCAGATTTCGAACTTCAGGTTGAGT
TAGCCTTTGAGAATCTTAAAGCTACTTTGGCTGCTGCAGGTTGCACCTTTGACGATATAGTGGACGTCACTACCTTTCAT
ACCGATCCGGAACATCAATTCGGCACCATTATGAAAGTAAAACAAAAGATCTTTGGCGCGCCACCTTACCCAAACTGGAC
AGCAGTGGGAGTCACCTGGTTAGCAGGCTTTGATTTTGAGATTAAGGTGATAGCACGAATTCCTGGCTGA

Upstream 100 bases:

>100_bases
TCAACATACAGGACCATCAAAACTATCCGGATTGTGTTGTACTACTGCACATATCAGTAGCTTCGCAGCCAATCAGACCC
TTTACAAAGAGAGCCATACA

Downstream 100 bases:

>100_bases
AGATCCGATCAAGCACTTTAATAGCGATTAAAGTGCTTTTTCCACTAGGGCTTGTTGATCTTTCGTGATGGATTATTAGA
CAGCATGATGGGCTGGTATA

Product: endoribonuclease L-PSP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MKREAIFPANRHALYEEHGYSAAIRSGDLLFVSGQVGSRADGSPEADFELQVELAFENLKATLAAAGCTFDDIVDVTTFH
TDPEHQFGTIMKVKQKIFGAPPYPNWTAVGVTWLAGFDFEIKVIARIPG

Sequences:

>Translated_129_residues
MKREAIFPANRHALYEEHGYSAAIRSGDLLFVSGQVGSRADGSPEADFELQVELAFENLKATLAAAGCTFDDIVDVTTFH
TDPEHQFGTIMKVKQKIFGAPPYPNWTAVGVTWLAGFDFEIKVIARIPG
>Mature_129_residues
MKREAIFPANRHALYEEHGYSAAIRSGDLLFVSGQVGSRADGSPEADFELQVELAFENLKATLAAAGCTFDDIVDVTTFH
TDPEHQFGTIMKVKQKIFGAPPYPNWTAVGVTWLAGFDFEIKVIARIPG

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI1790696, Length=128, Percent_Identity=80.46875, Blast_Score=219, Evalue=3e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 14145; Mature: 14145

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKREAIFPANRHALYEEHGYSAAIRSGDLLFVSGQVGSRADGSPEADFELQVELAFENLK
CCCCCCCCCCCCEEECCCCCEEEECCCCEEEEECCCCCCCCCCCCCCEEEEEEEEECCHH
ATLAAAGCTFDDIVDVTTFHTDPEHQFGTIMKVKQKIFGAPPYPNWTAVGVTWLAGFDFE
EEEHCCCCCHHHHEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCEE
IKVIARIPG
EEEEEECCC
>Mature Secondary Structure
MKREAIFPANRHALYEEHGYSAAIRSGDLLFVSGQVGSRADGSPEADFELQVELAFENLK
CCCCCCCCCCCCEEECCCCCEEEECCCCEEEEECCCCCCCCCCCCCCEEEEEEEEECCHH
ATLAAAGCTFDDIVDVTTFHTDPEHQFGTIMKVKQKIFGAPPYPNWTAVGVTWLAGFDFE
EEEHCCCCCHHHHEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCEE
IKVIARIPG
EEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]