Click here to switch to the map view.

The map label for this gene is yciS [H]

Identifier: 120598787

GI number: 120598787

Start: 2287739

End: 2288014

Strand: Direct

Name: yciS [H]

Synonym: Sputw3181_1973

Alternate gene names: 120598787

Gene position: 2287739-2288014 (Clockwise)

Preceding gene: 120598786

Following gene: 120598788

Centisome position: 48.59

GC content: 40.94

Gene sequence:

>276_bases
GTGAAATCATTTCTAGTGACTGTCCTAGTGGCATTATTATTTATTTTGGCGCTGATCTTCGGCGCGCGTAATGAACAAGT
GGTGACAATAAGCTACTTTGTGGCTCAAGGTGAGTATCGTTTACCTGTGGTATTGGCAATCGTTTTCTTTGCTGGCTTTA
TGCTGAGTTGGTTATTTGCTTGCTATTATATTGTCAGACTTAAACTTGCTTTAGCTATGACCCAAAAGAAACTAAATGCC
CAACTTGCCAAAACCCCTCAGGATGTAGACGCCTAA

Upstream 100 bases:

>100_bases
CCTTATGGAGGCTTTTTTGTATCTAATGTAAGGCAATGCTGGTCAGCTCAGTGAATTTCTTGGATAATCATAAAATTGAA
ACGCGTTTAGGGAGTACAGC

Downstream 100 bases:

>100_bases
TATGCTTGAGATCCTCTTTCTGTTGCTTCCCATTGCTGCCGGTTACGGTTGGTATATGGGTCGGCGGAGCATAAGGCAGA
ATCAAAGTAATCAGCGCAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 91; Mature: 91

Protein sequence:

>91_residues
MKSFLVTVLVALLFILALIFGARNEQVVTISYFVAQGEYRLPVVLAIVFFAGFMLSWLFACYYIVRLKLALAMTQKKLNA
QLAKTPQDVDA

Sequences:

>Translated_91_residues
MKSFLVTVLVALLFILALIFGARNEQVVTISYFVAQGEYRLPVVLAIVFFAGFMLSWLFACYYIVRLKLALAMTQKKLNA
QLAKTPQDVDA
>Mature_91_residues
MKSFLVTVLVALLFILALIFGARNEQVVTISYFVAQGEYRLPVVLAIVFFAGFMLSWLFACYYIVRLKLALAMTQKKLNA
QLAKTPQDVDA

Specific function: Unknown

COG id: COG3771

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1222 [H]

Homologues:

Organism=Escherichia coli, GI1787535, Length=79, Percent_Identity=39.2405063291139, Blast_Score=70, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010445 [H]

Pfam domain/function: PF06305 DUF1049 [H]

EC number: NA

Molecular weight: Translated: 10236; Mature: 10236

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSFLVTVLVALLFILALIFGARNEQVVTISYFVAQGEYRLPVVLAIVFFAGFMLSWLFA
CHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHEECCCCCCHHHHHHHHHHHHHHHHHHHH
CYYIVRLKLALAMTQKKLNAQLAKTPQDVDA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKSFLVTVLVALLFILALIFGARNEQVVTISYFVAQGEYRLPVVLAIVFFAGFMLSWLFA
CHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHEECCCCCCHHHHHHHHHHHHHHHHHHHH
CYYIVRLKLALAMTQKKLNAQLAKTPQDVDA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]