Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

Click here to switch to the map view.

The map label for this gene is rpsA

Identifier: 120598785

GI number:

Start: 2285586

End: 2287253

Strand: Direct

Name: rpsA

Synonym: Sputw3181_1971

Alternate gene names: NA

Gene position: NA

Preceding gene: 120598784

Following gene: 120598786

Centisome position: NA

GC content: NA

Gene sequence:

>1668_bases
ATGACTGAATCTTTTGCTGATCTATTTGAACAATCCCTTCAAACTCTGGAATTCCGTCCAGGTTCTATCGTTCGTGGTAC
TGTTGTTGCTATCGAAAACGGTATGGTCCTTGTTGACGCAGGTCTGAAGTCTGAAAGCCCAATCCCAGCTGAGCAATTCA
AAAACGCCCAAGGCGTTTTAGAAATTCAAGTTGGTGATGAAGTTGACGTAGCTCTTGACTCTGTTGAAGACGGCTTCGGT
GAGACTCAATTGTCTCGCGAAAAAGCGAAACGTCATGAAGCTTGGATCGTTCTGGAAAAAGCTTACGAAGATGCTGAAAC
TGTAATCGGTATCATCAATGGTAAAGTGAAAGGCGGTTTCACTGTTGAATTAAACGGTATCCGTGCCTTCTTACCAGGTT
CTCTAGTTGACGTGCGCCCAGTTCGCGACACCGCTCACTTAGAGTACAAAGAATTAGAATTCAAAGTTATCAAACTAGAC
CAGAAGCGTAACAACGTTGTTGTTTCTCGTCGTGCAGTTATCGAATCAGAAAGCAGCGCTGAGCGTGATGCACTGTTAGA
AAACCTGCAAGAAGGTCAAGCAGTTAAAGGTATCGTTAAGAACCTGACTGACTACGGTGCATTCGTAGATTTAGGTGGCG
TTGACGGTCTATTACATATCACTGATATGGCGTGGAAACGTGTTAAACATCCATCTGAAATCGTCAATGTTGGCGATGAA
ATCAACGTTAAAGTACTGAAGTACGATCGTGAGCGCACTCGTGTGTCTCTAGGTCTGAAACAACTTGGCGAAGATCCATG
GTTAGAAATCAGCAAACGCTACCCAGAAAACACACGTTTAACTGGTCGCGTAACTAACCTAACTGACTACGGTTGCTTCG
TCGAAATCGAAGAAGGCGTTGAAGGTCTGGTTCACGTTTCTGAAATGGATTGGACTAACAAGAACATTCACCCATCTAAA
GTGGTTAACTTAGGTGATGAAGTTGAAGTTCTGGTTCTGGACATCGATGAAGAGCGTCGTCGTATCTCTCTTGGTCTGAA
ACAATGTAAGACCAACCCATGGGATGACTTCGCAACTCGTTACAACAAAGGCGACAAGGTTTCTGGTAAGATCAAGTCAA
TCACTGACTTCGGTATCTTTATCGGTCTTGACGGCGGTATCGATGGCCTAGTTCACTTGTCTGACATTTCTTGGAACGGT
ACTGGCGAAGACGCAGTTTCTGAATACAAGAAAGGCGACGAAATCCACGCAGTGGTTCTGTCTGTTGATCCAGAGCGTGA
GCGCATCAGCTTAGGTGTTAAACAAACTGAAGACGATCCATTCAACGCTTACTTAGCTGATAAGAAGAAAGGTACTATCG
TACACGGTACTGTTTCTGCTGTTGATGCTAAAGGTGTCACTGTTGAACTGGCTGACACTGTTGAAGGTTACATCCGTGTA
GCTGACATCAGCCGTGAGCGCATCGAAGATGCATCTACTGTCTACAATGTAGGTGATGCAATCGAAGCTAAGTTCATGGG
TGTTGACCGTAAGAACCGCTCTATCAGCCTGTCAATCAAAGCGAAAGACGAAGCTGAAGAGAAAGAAGTAATGGCGACCT
TGAATAAACAAGAAGACGCTGTTATTAGTAATGCTATGGCTGAAGCGTTTAAAGCAGCTCGCAAATAA

Upstream 100 bases:

>100_bases
AGCTCACTGGATAGGTATTCGTATTAAGGATGATACGGATAATTAGACTGACTCCACGTCTAGGACTGACAGTGGTTTAT
TAAATAAAGTAACCTAAAAC

Downstream 100 bases:

>100_bases
TCGCCTGTTGTTAGAGGGTGGTTCGCCACCCTTTATAGGTGACTGTGTTTGGCTTGATAATAGGGGATAGCTAGGATGAC
AAAATCCGAACTGATCGAAA

Product: 30S ribosomal protein S1

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>555_residues
MTESFADLFEQSLQTLEFRPGSIVRGTVVAIENGMVLVDAGLKSESPIPAEQFKNAQGVLEIQVGDEVDVALDSVEDGFG
ETQLSREKAKRHEAWIVLEKAYEDAETVIGIINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTAHLEYKELEFKVIKLD
QKRNNVVVSRRAVIESESSAERDALLENLQEGQAVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE
INVKVLKYDRERTRVSLGLKQLGEDPWLEISKRYPENTRLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSK
VVNLGDEVEVLVLDIDEERRRISLGLKQCKTNPWDDFATRYNKGDKVSGKIKSITDFGIFIGLDGGIDGLVHLSDISWNG
TGEDAVSEYKKGDEIHAVVLSVDPERERISLGVKQTEDDPFNAYLADKKKGTIVHGTVSAVDAKGVTVELADTVEGYIRV
ADISRERIEDASTVYNVGDAIEAKFMGVDRKNRSISLSIKAKDEAEEKEVMATLNKQEDAVISNAMAEAFKAARK

Sequences:
NA

Specific function: NA

COG id: COG0539

COG function: function code J; Ribosomal protein S1

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA