Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120598742

Identifier: 120598742

GI number: 120598742

Start: 2223639

End: 2224958

Strand: Direct

Name: 120598742

Synonym: Sputw3181_1927

Alternate gene names: NA

Gene position: 2223639-2224958 (Clockwise)

Preceding gene: 120598741

Following gene: 120598743

Centisome position: 47.23

GC content: 44.09

Gene sequence:

>1320_bases
ATGACAAATAAACAAAATACCATTCCAAATAGACAAACAAAGCAGATTGCAGGTGCCTTAGCACTCGCCAGTTGTGGCCT
GTTTACCACCAGTGCCCATGCCACTGAATTAGCTAAAAAAAACGATGAGTGGAAAATTGATGCCGCGCTAATGTATTACG
GCGAGCAAGATAGAGTACAGGCGATTGAGGCGATTGGAACCGCACAAAAGGCCTTTGGTGATGAGAGTGTGTTGGATCTC
AAATTGGTTGTTGATAGTTTAACAGGTGCATCAGCATCGGGAGCCGTCGCTCAAAACAGCAGTCAAACCTTTACTCGTCC
CTCTGGTAATGGTCAGTATCATGTATCCGCGGGGGAAACGCCGTTAGATGACACCTTCCATGATACGCGTGTGCAAGCCA
ATGCGGCTTGGAGCGAAGTGCTGGATCCGGATTGGAAGCTCAATGTTGGTGTCTATGGTTCTAAAGAGTTTGATTATATG
TCTATCGGAACCAATGTTGGCATTGAGCGGGGCTTTAATAAGGATAATACGACGTTATTTTTAGGGACCGCCTACAGTTT
TGATGTGGTCGATCCAGTCGGAGGGCGGCCAGTCGATTTATCTTCTATGGCGATTCGCGATAACTTCACGACGCAGGAGG
CCTATCGCAGTGCATTTGATGCGACACGTCAAGGAGGTAGCGATAATAAACAAACGGCCGAGGTTATGTTAGGTGTTACC
CAAGTACTCAATCAGCGTTGGTTATTACAAGCAAACTATGGTTTATCGAGTGTTAATGGCTACTTGACCGATCCCTATAA
AGTACTCAGTGTGGTCGATAAGAATGGTGTCACTCAGGATATATTGTATGAAAGTAGGCCTGACTCCCGCTTAAAACACA
GTTTTTATGTGATGACAAAAGGGGCATTAGATTCTGGTGTGGTCGATTTTTCCTACCGCTACAATACCGATGATTGGGAT
CTCACCTCGCATACCCTAGAGACCCATTACCGTTATTATTTTAGCGGCAGTTTCTATGGTCAATTGCATTTACGTTACTA
CCAACAAAGTGCGGTCGATTTTTATCAGCCCTTTTTAATGGCTGATATTCCATTACCTGAGTTTGCCAGTGCCGATTACC
GAATTGGGGAGATGACGGCGTACACCATTGGGATTAAATTTGGTCATAAACTATCGGGTGGACACGAAATGTCTTATCGA
TTGGAATATTATCAACAAGATCCTAAAAATAACGGCACAAGTATTCCTGGAGAGCTACAAAATTTCGATCTTTTCCCGAC
TCAAAAGGCGATTGCAGCACAGTTTAGTTATTCTTTTTAA

Upstream 100 bases:

>100_bases
TGGTGGGTGTGGCTGTAATTAGTGCGTTATGTGACTAATGTTCTCTGCTATATCGCGGCGATCAACATTAAAATCAAGTA
GCCTACAGGTGTTGTCAGTT

Downstream 100 bases:

>100_bases
GCGATTTGTTGAGTCAGTGGAATAAAAAGATGTTGGCGCTAATAAGTATGGGAAGCTTTGCAACCCATACTTATTCATTT
ATTTCCCGCCATGCTTAATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 439; Mature: 438

Protein sequence:

>439_residues
MTNKQNTIPNRQTKQIAGALALASCGLFTTSAHATELAKKNDEWKIDAALMYYGEQDRVQAIEAIGTAQKAFGDESVLDL
KLVVDSLTGASASGAVAQNSSQTFTRPSGNGQYHVSAGETPLDDTFHDTRVQANAAWSEVLDPDWKLNVGVYGSKEFDYM
SIGTNVGIERGFNKDNTTLFLGTAYSFDVVDPVGGRPVDLSSMAIRDNFTTQEAYRSAFDATRQGGSDNKQTAEVMLGVT
QVLNQRWLLQANYGLSSVNGYLTDPYKVLSVVDKNGVTQDILYESRPDSRLKHSFYVMTKGALDSGVVDFSYRYNTDDWD
LTSHTLETHYRYYFSGSFYGQLHLRYYQQSAVDFYQPFLMADIPLPEFASADYRIGEMTAYTIGIKFGHKLSGGHEMSYR
LEYYQQDPKNNGTSIPGELQNFDLFPTQKAIAAQFSYSF

Sequences:

>Translated_439_residues
MTNKQNTIPNRQTKQIAGALALASCGLFTTSAHATELAKKNDEWKIDAALMYYGEQDRVQAIEAIGTAQKAFGDESVLDL
KLVVDSLTGASASGAVAQNSSQTFTRPSGNGQYHVSAGETPLDDTFHDTRVQANAAWSEVLDPDWKLNVGVYGSKEFDYM
SIGTNVGIERGFNKDNTTLFLGTAYSFDVVDPVGGRPVDLSSMAIRDNFTTQEAYRSAFDATRQGGSDNKQTAEVMLGVT
QVLNQRWLLQANYGLSSVNGYLTDPYKVLSVVDKNGVTQDILYESRPDSRLKHSFYVMTKGALDSGVVDFSYRYNTDDWD
LTSHTLETHYRYYFSGSFYGQLHLRYYQQSAVDFYQPFLMADIPLPEFASADYRIGEMTAYTIGIKFGHKLSGGHEMSYR
LEYYQQDPKNNGTSIPGELQNFDLFPTQKAIAAQFSYSF
>Mature_438_residues
TNKQNTIPNRQTKQIAGALALASCGLFTTSAHATELAKKNDEWKIDAALMYYGEQDRVQAIEAIGTAQKAFGDESVLDLK
LVVDSLTGASASGAVAQNSSQTFTRPSGNGQYHVSAGETPLDDTFHDTRVQANAAWSEVLDPDWKLNVGVYGSKEFDYMS
IGTNVGIERGFNKDNTTLFLGTAYSFDVVDPVGGRPVDLSSMAIRDNFTTQEAYRSAFDATRQGGSDNKQTAEVMLGVTQ
VLNQRWLLQANYGLSSVNGYLTDPYKVLSVVDKNGVTQDILYESRPDSRLKHSFYVMTKGALDSGVVDFSYRYNTDDWDL
TSHTLETHYRYYFSGSFYGQLHLRYYQQSAVDFYQPFLMADIPLPEFASADYRIGEMTAYTIGIKFGHKLSGGHEMSYRL
EYYQQDPKNNGTSIPGELQNFDLFPTQKAIAAQFSYSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48844; Mature: 48712

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNKQNTIPNRQTKQIAGALALASCGLFTTSAHATELAKKNDEWKIDAALMYYGEQDRVQ
CCCCCCCCCCHHHHHHHHHHHHHHCCCEECCHHHHHHHHCCCCEEEEEEEEEECCHHHHH
AIEAIGTAQKAFGDESVLDLKLVVDSLTGASASGAVAQNSSQTFTRPSGNGQYHVSAGET
HHHHHHHHHHHCCCCCEEEEEEEEHHHCCCCCCCCEECCCCCCEECCCCCCEEEEECCCC
PLDDTFHDTRVQANAAWSEVLDPDWKLNVGVYGSKEFDYMSIGTNVGIERGFNKDNTTLF
CCCCCCCCCEEECCCCHHHHCCCCCEEEEEEECCCCCCEEEECCCCCHHCCCCCCCCEEE
LGTAYSFDVVDPVGGRPVDLSSMAIRDNFTTQEAYRSAFDATRQGGSDNKQTAEVMLGVT
EEECEEEECCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
QVLNQRWLLQANYGLSSVNGYLTDPYKVLSVVDKNGVTQDILYESRPDSRLKHSFYVMTK
HHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHCCCCCCHHHCCEEEEEEC
GALDSGVVDFSYRYNTDDWDLTSHTLETHYRYYFSGSFYGQLHLRYYQQSAVDFYQPFLM
CCCCCCEEEEEEEECCCCCCCHHHHHEEEEEEEECCCEEEEEEEEEHHHHHHHHHHHHHE
ADIPLPEFASADYRIGEMTAYTIGIKFGHKLSGGHEMSYRLEYYQQDPKNNGTSIPGELQ
ECCCCCCCCCCCCEECCEEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCC
NFDLFPTQKAIAAQFSYSF
CCCCCCCHHHHHHHCCCCC
>Mature Secondary Structure 
TNKQNTIPNRQTKQIAGALALASCGLFTTSAHATELAKKNDEWKIDAALMYYGEQDRVQ
CCCCCCCCCHHHHHHHHHHHHHHCCCEECCHHHHHHHHCCCCEEEEEEEEEECCHHHHH
AIEAIGTAQKAFGDESVLDLKLVVDSLTGASASGAVAQNSSQTFTRPSGNGQYHVSAGET
HHHHHHHHHHHCCCCCEEEEEEEEHHHCCCCCCCCEECCCCCCEECCCCCCEEEEECCCC
PLDDTFHDTRVQANAAWSEVLDPDWKLNVGVYGSKEFDYMSIGTNVGIERGFNKDNTTLF
CCCCCCCCCEEECCCCHHHHCCCCCEEEEEEECCCCCCEEEECCCCCHHCCCCCCCCEEE
LGTAYSFDVVDPVGGRPVDLSSMAIRDNFTTQEAYRSAFDATRQGGSDNKQTAEVMLGVT
EEECEEEECCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
QVLNQRWLLQANYGLSSVNGYLTDPYKVLSVVDKNGVTQDILYESRPDSRLKHSFYVMTK
HHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHCCCCCCHHHCCEEEEEEC
GALDSGVVDFSYRYNTDDWDLTSHTLETHYRYYFSGSFYGQLHLRYYQQSAVDFYQPFLM
CCCCCCEEEEEEEECCCCCCCHHHHHEEEEEEEECCCEEEEEEEEEHHHHHHHHHHHHHE
ADIPLPEFASADYRIGEMTAYTIGIKFGHKLSGGHEMSYRLEYYQQDPKNNGTSIPGELQ
ECCCCCCCCCCCCEECCEEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCC
NFDLFPTQKAIAAQFSYSF
CCCCCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA