Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120598712

Identifier: 120598712

GI number: 120598712

Start: 2180773

End: 2181495

Strand: Direct

Name: 120598712

Synonym: Sputw3181_1897

Alternate gene names: NA

Gene position: 2180773-2181495 (Clockwise)

Preceding gene: 120598697

Following gene: 120598724

Centisome position: 46.32

GC content: 40.11

Gene sequence:

>723_bases
ATGACTACAGACACAATTGTTACTTCGGATGATATTTTACTAAAGCTATGTCATTCGGTGGCCCACGTGTTATCGAGCAC
GAGTGCTAGCCATGTTAGCCATGCGGGTATGGTGCAGAGTATTGCTCGGACTCGCCTTAAGCCAGATCTTGGCTGTTTTT
CTATTTTTGATGGTGGTTTTTCTGGACTTGTCGTGATCAACTTTTCAGCTTCCGCCGCCATTGAGATCTATCGTCGGTAT
ATGTTGAATATGGGGATGCCGGAGTCCGAGTTGGCGTTTTCCCACACTTCTGATGAAGTGGGAAATGTGATGGGGGAGTT
AATGAATCAAATTCTTGGTGATTTTATTAATAAAATCTCTAAAGAGTTGCAAACATCCATTAGCCAAAGCCAACCTAAGA
TGTTGACTATTAATAAAGAGTTAACTATTTCTATTGATGCAAATTTAGATGATGCTGTCGCAAGAAGGGTGTCCTTTAAA
ACAGAAAATAACCATATTTTCTACCTTGAGTTTGCAATGGATAAGACTGAATTTATTAAATTGGACGAGTTTGAATACGA
TGAGGAATTCGATCCAGATAGTTTGCTTGAGCAACATGGTAATAACGGTGCGAGTAACGATAGCGATGTATCACCTTGGT
CCAAAATGAAAGATAAACCCGCGATAGCCTCACTTACAACAGATGCTAATGCCGATGATTTACTTGACCAATTAGGCCTT
TAA

Upstream 100 bases:

>100_bases
GGTTTTATTCTTGATAAAAGAGGCTAATCAATTGTTTTAGTTTTGATTTTTTTGGGTTTTACGCGCAAGATTAATTCATC
GTTCAGTTTGAGAATTGATT

Downstream 100 bases:

>100_bases
TTAATAAGACTCTTAATCTGCGCAATAGACGAATGTGCACAGCATTCGTCTATTTTAGTGGGCTTAAGGGTTTTATTTCG
CGCTGTATTGGCGGATAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MTTDTIVTSDDILLKLCHSVAHVLSSTSASHVSHAGMVQSIARTRLKPDLGCFSIFDGGFSGLVVINFSASAAIEIYRRY
MLNMGMPESELAFSHTSDEVGNVMGELMNQILGDFINKISKELQTSISQSQPKMLTINKELTISIDANLDDAVARRVSFK
TENNHIFYLEFAMDKTEFIKLDEFEYDEEFDPDSLLEQHGNNGASNDSDVSPWSKMKDKPAIASLTTDANADDLLDQLGL

Sequences:

>Translated_240_residues
MTTDTIVTSDDILLKLCHSVAHVLSSTSASHVSHAGMVQSIARTRLKPDLGCFSIFDGGFSGLVVINFSASAAIEIYRRY
MLNMGMPESELAFSHTSDEVGNVMGELMNQILGDFINKISKELQTSISQSQPKMLTINKELTISIDANLDDAVARRVSFK
TENNHIFYLEFAMDKTEFIKLDEFEYDEEFDPDSLLEQHGNNGASNDSDVSPWSKMKDKPAIASLTTDANADDLLDQLGL
>Mature_239_residues
TTDTIVTSDDILLKLCHSVAHVLSSTSASHVSHAGMVQSIARTRLKPDLGCFSIFDGGFSGLVVINFSASAAIEIYRRYM
LNMGMPESELAFSHTSDEVGNVMGELMNQILGDFINKISKELQTSISQSQPKMLTINKELTISIDANLDDAVARRVSFKT
ENNHIFYLEFAMDKTEFIKLDEFEYDEEFDPDSLLEQHGNNGASNDSDVSPWSKMKDKPAIASLTTDANADDLLDQLGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26497; Mature: 26366

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTDTIVTSDDILLKLCHSVAHVLSSTSASHVSHAGMVQSIARTRLKPDLGCFSIFDGGF
CCCCCEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC
SGLVVINFSASAAIEIYRRYMLNMGMPESELAFSHTSDEVGNVMGELMNQILGDFINKIS
CEEEEEEECCHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
KELQTSISQSQPKMLTINKELTISIDANLDDAVARRVSFKTENNHIFYLEFAMDKTEFIK
HHHHHHHHHCCCCEEEECCEEEEEEECCCHHHHHHHHHEEECCCEEEEEEEECCCCCEEE
LDEFEYDEEFDPDSLLEQHGNNGASNDSDVSPWSKMKDKPAIASLTTDANADDLLDQLGL
ECCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCEEEEECCCCHHHHHHHHCC
>Mature Secondary Structure 
TTDTIVTSDDILLKLCHSVAHVLSSTSASHVSHAGMVQSIARTRLKPDLGCFSIFDGGF
CCCCEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC
SGLVVINFSASAAIEIYRRYMLNMGMPESELAFSHTSDEVGNVMGELMNQILGDFINKIS
CEEEEEEECCHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
KELQTSISQSQPKMLTINKELTISIDANLDDAVARRVSFKTENNHIFYLEFAMDKTEFIK
HHHHHHHHHCCCCEEEECCEEEEEEECCCHHHHHHHHHEEECCCEEEEEEEECCCCCEEE
LDEFEYDEEFDPDSLLEQHGNNGASNDSDVSPWSKMKDKPAIASLTTDANADDLLDQLGL
ECCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCEEEEECCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA