Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120598663

Identifier: 120598663

GI number: 120598663

Start: 2127190

End: 2129466

Strand: Direct

Name: 120598663

Synonym: Sputw3181_1848

Alternate gene names: NA

Gene position: 2127190-2129466 (Clockwise)

Preceding gene: 120598662

Following gene: 120598664

Centisome position: 45.18

GC content: 47.21

Gene sequence:

>2277_bases
ATGCGGCGCTTACTATTTGAGATACAAGGAATAACCATGAAGTACTTGGTTAGCGTAGTTGCATGCTGTTTATTATCGGC
CTGTTCTTTTGGGGATGCTGATGTTGAGTTTACACCTGAAAAAGGGGAAGAACGCTCGTATCAGCTTTATAGCACCAGCA
AGATCACAGTAGATAATGGTCGGCGTACCGAAACGGTTAACACCAGCTCACATCAATTGTTGCGTTATAAGGTCCTCGAA
ACAGGCAAAAACAGCCAGTTTCAAGTACATGTCGATTATATGAACATGCGCGATGGTCAAGGAAGCGGTGTCAGCAGTGG
CCAACGAGCCGATCGTAATCCAGAAATGCACGCTATTTTCTCGCAAGGATTTGAATTTACGTTAAATCTAGACAATGGCA
GCGTTAAAGAATTGAGCGCACTAAACAAATCGGTATGGCAAGCTCAGTTGGCTGAGCGCGGTGCAGAGCTTGAGCTGGAA
CTGAAAAAGCTCTTTAGTTCATCGGCCTTTCTAAGTTCTATACCCGCTAAAACAGGGGCGGTTGTTGCGCTTCCTGCCTA
TCAAGGCCACGCCAATGCCAAGCTTACCGTACTACAAGTCACAGACTCGCATGTGTTAGCCAAAGTTGAAAGTGACAGCG
AGCAAGCCAAAATATACGGTCAGTTGATGTTAGAGCGTGTGCGGGGTTGGTTAGCGCAGTTAGCCTTAGTCGCGGAAGCG
CCGTTTGAGCGCTACGGCTATAAAGGCACAGTGCGCAGCAATGTCATTATGTTGCCGCAACAGCGCCAGCTAGGTGATCT
AACGCAGCGTTTAGGTTTTGATTATGATTTCCCTGCCTTTGAGTATCCAAAACAGCCTGACATTGTGCTGGATGACGTTA
ATAAAGCTTTAACCCAAGATGTCGTATTTGCCTATGATGCGGGTTACTTTTACCAGCAAGATGACTTGTTGAATCTAACT
TATCAACATGATTTTTCAGGTTATAAACCCGAAGGTGGGTTTAACTTAACTGATATCACGGCACACAGTGCGGATGGCAC
AGTGCTGCCGCTGCAACTGAGTAAGGTGGGCAGTTACAGTTATCCAGAGCAGGATGGTTTTTATCAATCCGTTCAGCAAA
ATCTGCTTATCGGCTGGAATGCGCCGAATGAACTCTTAACGCAGGTTACTGAGTTTCGCGCAAAAGCCCATTATCATGGC
GCAAAACTGGTAAAACTTAACCTGACACCCGATCCCAGCAAAACCGTGACCTTGCAGTATGAAGACTTACAACTGGAACT
CTCGCCGCTCCCCGACAAACCGTTCAGTTATTTATTGAAATCGCGAGGTTCTGACAAATCTTGGTTATATAGGCATTATG
ATGGTGCCGAAGGCGCTATGGTGCAGTATCTTTCACCGCCGCCCACTGGACCGGATTGGTTAACTTCAGCAGAGCAAAAT
ATGTTGGCGCTGGTGTCATTTGACCAATATGAAACGACCACGCAGTTTACCTTTACCGCTGTGCCGCCAACGCTGACACT
CTATGTGAATACTGCGGCTGACAGCGGCGAACTGACTAAAAATATTCGTTTTATTCCGACCTTAGATTACGCGCAAAATG
TGGCGTATCCACCAGTCCAGCAACAACTGCTTTACCGTGATGATATGTATGCGGCTTATGATAATCAGCCGCAAGCTATC
ACACCTGTCGATATCGCCTTACTTGAGCCGCAGATCGTGGCTAAGTACGGTGTCAGCTTGTTGTTAACCTCAGAGCAGGC
AGCGGTGTGTACGCTCAGTGTTGTGGATGCACCTAAGGTAAACGGGCACACACTGCAATGGACAAATATAAGCTCTAACA
CTAATACGGGTTTCGGTGGTGGGCTGGATAAGTCTGTACTGTACCAATTGAGTAGCGCCGATGGGATCCGCCGCAATTTT
TACGATATCAATGTCAGCAGCACCTTGGCCTGTAAAGGTACGCCTCAATGGCAAGCGCTAGTGTATCAACCCGAGCAAAG
CTGGTTGATTGATATCACGCAATTGCCGAATGTTGATACCCGTCAAACTGTGGCCGATTTTATGCGCCGTTATCGTTTTT
TAAATGCGCAGAATGTACCGCTAGCTCCTGCTATTCAAGATGAGAGCGATGATTTTTATCAGCGTCCGTTGCAGCAAGTA
TTACGTGAGGAGCGCTGGTTTGTACTGGCGGGGCGTGCAGCCGCGATAGAGTATTTGACGATAAGCGGCGAACCCGTCAA
TAAACAGTGGGTTAACACTTTCCCACCGTTACCTTAA

Upstream 100 bases:

>100_bases
GTGACTATCTAAAAAGGATGTTTTAGTAGCGTACTCGTGTGTTGTGCTGAACAGGCATAAATAGCCAAAGCATTTTATTT
ACTGGGCACGAAAGGGCATA

Downstream 100 bases:

>100_bases
GGAGGTGATATGAGAGTTTTATTACTATTATCAGTACTCTTGATGTCATTTAATCTGTCAGCGGAGCGGATCTTACTCGA
CGAACTATGGCGGGTTAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 758; Mature: 758

Protein sequence:

>758_residues
MRRLLFEIQGITMKYLVSVVACCLLSACSFGDADVEFTPEKGEERSYQLYSTSKITVDNGRRTETVNTSSHQLLRYKVLE
TGKNSQFQVHVDYMNMRDGQGSGVSSGQRADRNPEMHAIFSQGFEFTLNLDNGSVKELSALNKSVWQAQLAERGAELELE
LKKLFSSSAFLSSIPAKTGAVVALPAYQGHANAKLTVLQVTDSHVLAKVESDSEQAKIYGQLMLERVRGWLAQLALVAEA
PFERYGYKGTVRSNVIMLPQQRQLGDLTQRLGFDYDFPAFEYPKQPDIVLDDVNKALTQDVVFAYDAGYFYQQDDLLNLT
YQHDFSGYKPEGGFNLTDITAHSADGTVLPLQLSKVGSYSYPEQDGFYQSVQQNLLIGWNAPNELLTQVTEFRAKAHYHG
AKLVKLNLTPDPSKTVTLQYEDLQLELSPLPDKPFSYLLKSRGSDKSWLYRHYDGAEGAMVQYLSPPPTGPDWLTSAEQN
MLALVSFDQYETTTQFTFTAVPPTLTLYVNTAADSGELTKNIRFIPTLDYAQNVAYPPVQQQLLYRDDMYAAYDNQPQAI
TPVDIALLEPQIVAKYGVSLLLTSEQAAVCTLSVVDAPKVNGHTLQWTNISSNTNTGFGGGLDKSVLYQLSSADGIRRNF
YDINVSSTLACKGTPQWQALVYQPEQSWLIDITQLPNVDTRQTVADFMRRYRFLNAQNVPLAPAIQDESDDFYQRPLQQV
LREERWFVLAGRAAAIEYLTISGEPVNKQWVNTFPPLP

Sequences:

>Translated_758_residues
MRRLLFEIQGITMKYLVSVVACCLLSACSFGDADVEFTPEKGEERSYQLYSTSKITVDNGRRTETVNTSSHQLLRYKVLE
TGKNSQFQVHVDYMNMRDGQGSGVSSGQRADRNPEMHAIFSQGFEFTLNLDNGSVKELSALNKSVWQAQLAERGAELELE
LKKLFSSSAFLSSIPAKTGAVVALPAYQGHANAKLTVLQVTDSHVLAKVESDSEQAKIYGQLMLERVRGWLAQLALVAEA
PFERYGYKGTVRSNVIMLPQQRQLGDLTQRLGFDYDFPAFEYPKQPDIVLDDVNKALTQDVVFAYDAGYFYQQDDLLNLT
YQHDFSGYKPEGGFNLTDITAHSADGTVLPLQLSKVGSYSYPEQDGFYQSVQQNLLIGWNAPNELLTQVTEFRAKAHYHG
AKLVKLNLTPDPSKTVTLQYEDLQLELSPLPDKPFSYLLKSRGSDKSWLYRHYDGAEGAMVQYLSPPPTGPDWLTSAEQN
MLALVSFDQYETTTQFTFTAVPPTLTLYVNTAADSGELTKNIRFIPTLDYAQNVAYPPVQQQLLYRDDMYAAYDNQPQAI
TPVDIALLEPQIVAKYGVSLLLTSEQAAVCTLSVVDAPKVNGHTLQWTNISSNTNTGFGGGLDKSVLYQLSSADGIRRNF
YDINVSSTLACKGTPQWQALVYQPEQSWLIDITQLPNVDTRQTVADFMRRYRFLNAQNVPLAPAIQDESDDFYQRPLQQV
LREERWFVLAGRAAAIEYLTISGEPVNKQWVNTFPPLP
>Mature_758_residues
MRRLLFEIQGITMKYLVSVVACCLLSACSFGDADVEFTPEKGEERSYQLYSTSKITVDNGRRTETVNTSSHQLLRYKVLE
TGKNSQFQVHVDYMNMRDGQGSGVSSGQRADRNPEMHAIFSQGFEFTLNLDNGSVKELSALNKSVWQAQLAERGAELELE
LKKLFSSSAFLSSIPAKTGAVVALPAYQGHANAKLTVLQVTDSHVLAKVESDSEQAKIYGQLMLERVRGWLAQLALVAEA
PFERYGYKGTVRSNVIMLPQQRQLGDLTQRLGFDYDFPAFEYPKQPDIVLDDVNKALTQDVVFAYDAGYFYQQDDLLNLT
YQHDFSGYKPEGGFNLTDITAHSADGTVLPLQLSKVGSYSYPEQDGFYQSVQQNLLIGWNAPNELLTQVTEFRAKAHYHG
AKLVKLNLTPDPSKTVTLQYEDLQLELSPLPDKPFSYLLKSRGSDKSWLYRHYDGAEGAMVQYLSPPPTGPDWLTSAEQN
MLALVSFDQYETTTQFTFTAVPPTLTLYVNTAADSGELTKNIRFIPTLDYAQNVAYPPVQQQLLYRDDMYAAYDNQPQAI
TPVDIALLEPQIVAKYGVSLLLTSEQAAVCTLSVVDAPKVNGHTLQWTNISSNTNTGFGGGLDKSVLYQLSSADGIRRNF
YDINVSSTLACKGTPQWQALVYQPEQSWLIDITQLPNVDTRQTVADFMRRYRFLNAQNVPLAPAIQDESDDFYQRPLQQV
LREERWFVLAGRAAAIEYLTISGEPVNKQWVNTFPPLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 84901; Mature: 84901

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLLFEIQGITMKYLVSVVACCLLSACSFGDADVEFTPEKGEERSYQLYSTSKITVDNG
CCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEEECEEEEECCC
RRTETVNTSSHQLLRYKVLETGKNSQFQVHVDYMNMRDGQGSGVSSGQRADRNPEMHAIF
CEEEEECCCCHHEEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEE
SQGFEFTLNLDNGSVKELSALNKSVWQAQLAERGAELELELKKLFSSSAFLSSIPAKTGA
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHCCCHHHHHCCCCCCC
VVALPAYQGHANAKLTVLQVTDSHVLAKVESDSEQAKIYGQLMLERVRGWLAQLALVAEA
EEEEECCCCCCCCEEEEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PFERYGYKGTVRSNVIMLPQQRQLGDLTQRLGFDYDFPAFEYPKQPDIVLDDVNKALTQD
CHHHCCCCCEECCCEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHHH
VVFAYDAGYFYQQDDLLNLTYQHDFSGYKPEGGFNLTDITAHSADGTVLPLQLSKVGSYS
EEEEEECCEEEECCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCEEEEEEEECCCCCC
YPEQDGFYQSVQQNLLIGWNAPNELLTQVTEFRAKAHYHGAKLVKLNLTPDPSKTVTLQY
CCCCCCHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEEEE
EDLQLELSPLPDKPFSYLLKSRGSDKSWLYRHYDGAEGAMVQYLSPPPTGPDWLTSAEQN
EEEEEEECCCCCCHHHHHHHCCCCCCCEEEEECCCCCCCEEEEECCCCCCHHHHCCCCCC
MLALVSFDQYETTTQFTFTAVPPTLTLYVNTAADSGELTKNIRFIPTLDYAQNVAYPPVQ
EEEEEEECCCCCEEEEEEEECCCEEEEEEEECCCCCCHHCCEEEEEECHHHHCCCCCCHH
QQLLYRDDMYAAYDNQPQAITPVDIALLEPQIVAKYGVSLLLTSEQAAVCTLSVVDAPKV
HHHHHHCCEEEEECCCCCEECCEEEEEECCHHHHHCCCEEEEECCCCEEEEEEEECCCCC
NGHTLQWTNISSNTNTGFGGGLDKSVLYQLSSADGIRRNFYDINVSSTLACKGTPQWQAL
CCCEEEEEECCCCCCCCCCCCCCHHHHHEECCCCCCCCCEEEECCCCEEEECCCCCCEEE
VYQPEQSWLIDITQLPNVDTRQTVADFMRRYRFLNAQNVPLAPAIQDESDDFYQRPLQQV
EECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH
LREERWFVLAGRAAAIEYLTISGEPVNKQWVNTFPPLP
HHCCCEEEEECCEEEEEEEEECCCCCCCHHHCCCCCCC
>Mature Secondary Structure
MRRLLFEIQGITMKYLVSVVACCLLSACSFGDADVEFTPEKGEERSYQLYSTSKITVDNG
CCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEEECEEEEECCC
RRTETVNTSSHQLLRYKVLETGKNSQFQVHVDYMNMRDGQGSGVSSGQRADRNPEMHAIF
CEEEEECCCCHHEEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEE
SQGFEFTLNLDNGSVKELSALNKSVWQAQLAERGAELELELKKLFSSSAFLSSIPAKTGA
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHCCCHHHHHCCCCCCC
VVALPAYQGHANAKLTVLQVTDSHVLAKVESDSEQAKIYGQLMLERVRGWLAQLALVAEA
EEEEECCCCCCCCEEEEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PFERYGYKGTVRSNVIMLPQQRQLGDLTQRLGFDYDFPAFEYPKQPDIVLDDVNKALTQD
CHHHCCCCCEECCCEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHHH
VVFAYDAGYFYQQDDLLNLTYQHDFSGYKPEGGFNLTDITAHSADGTVLPLQLSKVGSYS
EEEEEECCEEEECCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCEEEEEEEECCCCCC
YPEQDGFYQSVQQNLLIGWNAPNELLTQVTEFRAKAHYHGAKLVKLNLTPDPSKTVTLQY
CCCCCCHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEEEE
EDLQLELSPLPDKPFSYLLKSRGSDKSWLYRHYDGAEGAMVQYLSPPPTGPDWLTSAEQN
EEEEEEECCCCCCHHHHHHHCCCCCCCEEEEECCCCCCCEEEEECCCCCCHHHHCCCCCC
MLALVSFDQYETTTQFTFTAVPPTLTLYVNTAADSGELTKNIRFIPTLDYAQNVAYPPVQ
EEEEEEECCCCCEEEEEEEECCCEEEEEEEECCCCCCHHCCEEEEEECHHHHCCCCCCHH
QQLLYRDDMYAAYDNQPQAITPVDIALLEPQIVAKYGVSLLLTSEQAAVCTLSVVDAPKV
HHHHHHCCEEEEECCCCCEECCEEEEEECCHHHHHCCCEEEEECCCCEEEEEEEECCCCC
NGHTLQWTNISSNTNTGFGGGLDKSVLYQLSSADGIRRNFYDINVSSTLACKGTPQWQAL
CCCEEEEEECCCCCCCCCCCCCCHHHHHEECCCCCCCCCEEEECCCCEEEECCCCCCEEE
VYQPEQSWLIDITQLPNVDTRQTVADFMRRYRFLNAQNVPLAPAIQDESDDFYQRPLQQV
EECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH
LREERWFVLAGRAAAIEYLTISGEPVNKQWVNTFPPLP
HHCCCEEEEECCEEEEEEEEECCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA