| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is yebG [H]
Identifier: 120598620
GI number: 120598620
Start: 2075948
End: 2076247
Strand: Direct
Name: yebG [H]
Synonym: Sputw3181_1804
Alternate gene names: 120598620
Gene position: 2075948-2076247 (Clockwise)
Preceding gene: 120598616
Following gene: 120598621
Centisome position: 44.09
GC content: 42.33
Gene sequence:
>300_bases ATGGCAGTTATTACACAGTTTGTCGTGGTAAGAGAAGGGGTTGAAAAGATGACATTCACATCGAAAAAGGAGGCCGATGC CTACGATAAGATGCTCGATATCGCTGATAACCTGATCCCCTTCATTCAAAAATCTGAATTAGGCATTGATGAAAGTCTGA GCGAACGGCTCGCATTTTATTTTGCTAGTAATAAAGATGAGCTGACGAACTTGCTTAAAGGCGTCGTTCAGGTTAATAGT ACGCCAACGAATCAAGCGGTAACCAAGAAAACAGCAAAAAAAGCTGAAGCGGCAGAGTAG
Upstream 100 bases:
>100_bases TGAAAGCCGCCTGATAATACCAGATTAATCAGAACACTTGCATCACAAGTTCGATCTATGTCATTCTGGTTACTGTATAT AAAAACAGTGCGAGGCAGTC
Downstream 100 bases:
>100_bases ACAAGGTTAGGAAATATAATGAAATCGCAATTTTATGAGTCACTGAATCGTCAAGCGTTAGCTTTGCTTGAAGGTGAAGA TGATGTTGTGGCGGCAATGG
Product: YebG family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 99; Mature: 98
Protein sequence:
>99_residues MAVITQFVVVREGVEKMTFTSKKEADAYDKMLDIADNLIPFIQKSELGIDESLSERLAFYFASNKDELTNLLKGVVQVNS TPTNQAVTKKTAKKAEAAE
Sequences:
>Translated_99_residues MAVITQFVVVREGVEKMTFTSKKEADAYDKMLDIADNLIPFIQKSELGIDESLSERLAFYFASNKDELTNLLKGVVQVNS TPTNQAVTKKTAKKAEAAE >Mature_98_residues AVITQFVVVREGVEKMTFTSKKEADAYDKMLDIADNLIPFIQKSELGIDESLSERLAFYFASNKDELTNLLKGVVQVNST PTNQAVTKKTAKKAEAAE
Specific function: Unknown
COG id: COG3141
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788153, Length=87, Percent_Identity=47.1264367816092, Blast_Score=78, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009813 [H]
Pfam domain/function: PF07130 YebG [H]
EC number: NA
Molecular weight: Translated: 10974; Mature: 10842
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVITQFVVVREGVEKMTFTSKKEADAYDKMLDIADNLIPFIQKSELGIDESLSERLAFY CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH FASNKDELTNLLKGVVQVNSTPTNQAVTKKTAKKAEAAE HCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure AVITQFVVVREGVEKMTFTSKKEADAYDKMLDIADNLIPFIQKSELGIDESLSERLAFY HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH FASNKDELTNLLKGVVQVNSTPTNQAVTKKTAKKAEAAE HCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]