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The map label for this gene is udk [H]

Identifier: 120598607

GI number: 120598607

Start: 2062625

End: 2063263

Strand: Direct

Name: udk [H]

Synonym: Sputw3181_1791

Alternate gene names: 120598607

Gene position: 2062625-2063263 (Clockwise)

Preceding gene: 120598606

Following gene: 120598608

Centisome position: 43.81

GC content: 41.78

Gene sequence:

>639_bases
ATGAATTCTCAGCAGTGTGTCATTATTGCAATTGCTGGCGCGTCAGCATCGGGCAAAAGTTTGATTGCCAAAACGATTTT
TGACGAGTTGCGTCGTGATTTAGGCACAGATCAAATAGGGGTAATTAATGAAGATGCGTATTACCGCGATCAGAGTCATT
TATCCATGGATGAACGGGTATTAACCAACTACGACCATCCAAAAGCACTAGACCATCAACTGCTATGCACGCATTTACAG
TTGTTAAAGTCTGGTGAAGCTGTAGATATCCCTTGTTATAGCTATACAGAGCATACTCGCACGGCTGATACGGTAACAAT
GACACCTAAAAAGGTGATTATTTTAGAAGGCATTCTGCTATTAACCGATCCTAAATTACGTGAACTGATGGATGCCAGCG
TGTTTATGGACACGCCGCTGGATATTTGTTTTTTACGTCGCTTAACTCGTGATGTGGCAGAACGTGGTCGTACGATGGAA
TCTGTTATTTCGCAGTACAAAAAAACCGTGCGTCCGATGTTCTTACAGTTTATTGAACCTTCGAAACAATACGCCGATAT
TATCGTGCCTCGTGGCGGTAAGAATCGTATTGCGACCGATATTTTAAAAACTCGTATTCAGCACTTATTGGCAAAATAA

Upstream 100 bases:

>100_bases
ATCGGGAAATTGCCCGTAAAGTGGGTGCAGAGTTGGCCCTTAAACAGAGTCAAAAAACAGTTTCTATTAGCGTATCAGAT
GATGAGTAAGGTTTAAGGGT

Downstream 100 bases:

>100_bases
CGACATAAAAACTTAGGGAGTAATAGGTAAGATGCGCTTAACTGATATCGAAATTGAACAGGCTCTTGATAACGGCACAA
TCGTAATAGAACCTCGTCCT

Product: uridine kinase

Products: NA

Alternate protein names: Cytidine monophosphokinase; Uridine monophosphokinase [H]

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MNSQQCVIIAIAGASASGKSLIAKTIFDELRRDLGTDQIGVINEDAYYRDQSHLSMDERVLTNYDHPKALDHQLLCTHLQ
LLKSGEAVDIPCYSYTEHTRTADTVTMTPKKVIILEGILLLTDPKLRELMDASVFMDTPLDICFLRRLTRDVAERGRTME
SVISQYKKTVRPMFLQFIEPSKQYADIIVPRGGKNRIATDILKTRIQHLLAK

Sequences:

>Translated_212_residues
MNSQQCVIIAIAGASASGKSLIAKTIFDELRRDLGTDQIGVINEDAYYRDQSHLSMDERVLTNYDHPKALDHQLLCTHLQ
LLKSGEAVDIPCYSYTEHTRTADTVTMTPKKVIILEGILLLTDPKLRELMDASVFMDTPLDICFLRRLTRDVAERGRTME
SVISQYKKTVRPMFLQFIEPSKQYADIIVPRGGKNRIATDILKTRIQHLLAK
>Mature_212_residues
MNSQQCVIIAIAGASASGKSLIAKTIFDELRRDLGTDQIGVINEDAYYRDQSHLSMDERVLTNYDHPKALDHQLLCTHLQ
LLKSGEAVDIPCYSYTEHTRTADTVTMTPKKVIILEGILLLTDPKLRELMDASVFMDTPLDICFLRRLTRDVAERGRTME
SVISQYKKTVRPMFLQFIEPSKQYADIIVPRGGKNRIATDILKTRIQHLLAK

Specific function: Pyrimidine salvage pathway. [C]

COG id: COG0572

COG function: function code F; Uridine kinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the uridine kinase family [H]

Homologues:

Organism=Homo sapiens, GI57863312, Length=210, Percent_Identity=38.5714285714286, Blast_Score=160, Evalue=9e-40,
Organism=Homo sapiens, GI301129207, Length=210, Percent_Identity=38.5714285714286, Blast_Score=160, Evalue=1e-39,
Organism=Homo sapiens, GI18699734, Length=216, Percent_Identity=35.1851851851852, Blast_Score=154, Evalue=7e-38,
Organism=Homo sapiens, GI13899253, Length=214, Percent_Identity=31.7757009345794, Blast_Score=133, Evalue=1e-31,
Organism=Homo sapiens, GI209863022, Length=152, Percent_Identity=26.9736842105263, Blast_Score=77, Evalue=8e-15,
Organism=Escherichia coli, GI87082034, Length=209, Percent_Identity=70.8133971291866, Blast_Score=317, Evalue=3e-88,
Organism=Caenorhabditis elegans, GI17539894, Length=207, Percent_Identity=35.2657004830918, Blast_Score=145, Evalue=1e-35,
Organism=Caenorhabditis elegans, GI17539892, Length=207, Percent_Identity=35.2657004830918, Blast_Score=145, Evalue=1e-35,
Organism=Caenorhabditis elegans, GI71981181, Length=215, Percent_Identity=34.4186046511628, Blast_Score=129, Evalue=2e-30,
Organism=Saccharomyces cerevisiae, GI6324339, Length=151, Percent_Identity=34.4370860927152, Blast_Score=110, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24649624, Length=210, Percent_Identity=36.6666666666667, Blast_Score=153, Evalue=7e-38,
Organism=Drosophila melanogaster, GI221458995, Length=210, Percent_Identity=36.1904761904762, Blast_Score=152, Evalue=1e-37,
Organism=Drosophila melanogaster, GI28573516, Length=204, Percent_Identity=37.2549019607843, Blast_Score=149, Evalue=1e-36,
Organism=Drosophila melanogaster, GI28573514, Length=204, Percent_Identity=37.2549019607843, Blast_Score=149, Evalue=1e-36,
Organism=Drosophila melanogaster, GI28573512, Length=204, Percent_Identity=37.2549019607843, Blast_Score=149, Evalue=1e-36,
Organism=Drosophila melanogaster, GI45550449, Length=204, Percent_Identity=37.2549019607843, Blast_Score=149, Evalue=2e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006083
- InterPro:   IPR000764 [H]

Pfam domain/function: PF00485 PRK [H]

EC number: =2.7.1.48 [H]

Molecular weight: Translated: 24050; Mature: 24050

Theoretical pI: Translated: 7.98; Mature: 7.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSQQCVIIAIAGASASGKSLIAKTIFDELRRDLGTDQIGVINEDAYYRDQSHLSMDERV
CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCHHHCCCHHCCHHHHH
LTNYDHPKALDHQLLCTHLQLLKSGEAVDIPCYSYTEHTRTADTVTMTPKKVIILEGILL
HHCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEECCCEEEEECCCCE
LTDPKLRELMDASVFMDTPLDICFLRRLTRDVAERGRTMESVISQYKKTVRPMFLQFIEP
ECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
SKQYADIIVPRGGKNRIATDILKTRIQHLLAK
CHHHHEEEECCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNSQQCVIIAIAGASASGKSLIAKTIFDELRRDLGTDQIGVINEDAYYRDQSHLSMDERV
CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCHHHCCCHHCCHHHHH
LTNYDHPKALDHQLLCTHLQLLKSGEAVDIPCYSYTEHTRTADTVTMTPKKVIILEGILL
HHCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEECCCEEEEECCCCE
LTDPKLRELMDASVFMDTPLDICFLRRLTRDVAERGRTMESVISQYKKTVRPMFLQFIEP
ECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
SKQYADIIVPRGGKNRIATDILKTRIQHLLAK
CHHHHEEEECCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA