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The map label for this gene is slyA [C]

Identifier: 120598586

GI number: 120598586

Start: 2040017

End: 2040490

Strand: Direct

Name: slyA [C]

Synonym: Sputw3181_1769

Alternate gene names: 120598586

Gene position: 2040017-2040490 (Clockwise)

Preceding gene: 120598585

Following gene: 120598589

Centisome position: 43.33

GC content: 40.72

Gene sequence:

>474_bases
ATGATGGCGCATAGAGAAAGTGAAAACGCGTTAAACCTTTGTGGTAGGAGGTGCTGTTTGAATCGTCATGAAAGCTTAGG
CTATCTTGTATCCCACTTAAATATCGAGCTGCAAAATGAGCTTGATCTGCATCTTAAGCGATATCAACTCGATATAAAAC
TGTGGCCTGTGCTGTTTGCTTTATGGCAAGAAGAGGGTATAAGCCAAACTGAATTGTCTAAGCGTTGCGATGTGGCAAAT
TACACTATGACGCGCTTACTCGATCAGTTGCAGGTGCAAGGTCTTATTACTCGCCATCAAGAAGTCGATAATCGGCGTGC
TTTTCAAATCTTTTTGACCGATGAAGCCAAAGCATTAGAGCAAGATCTTATCTGCGAAGCTGAGCGGGTTAATGAAAAAT
TCCTGTCAAATTTAAGTGAAGATGAACAACAGCTATTCATTTTACTATTGAATAAAATCAACCGCTTGGCTTGA

Upstream 100 bases:

>100_bases
AGATGAGGAATGAACTCGTAGATTAATCGCATCATTTGCTGTGGTCTTAGCTAGTTTATTATGGGTTAAGTGGTAGTATT
AAAACTAACTCTGGGTTCCT

Downstream 100 bases:

>100_bases
AGCTTTGAATCTAATGGGTATGGAGGAAAACTGTGGTTTAGCTGTTTTTACTTCTATCTGTATGTGGTTATCTAAATCAT
TTTCCCAGTTTAATCCCACC

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; Transcriptional Regulator MarR Family Protein; Transcriptional Regulator MarR; Regulatory Protein MarR

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MMAHRESENALNLCGRRCCLNRHESLGYLVSHLNIELQNELDLHLKRYQLDIKLWPVLFALWQEEGISQTELSKRCDVAN
YTMTRLLDQLQVQGLITRHQEVDNRRAFQIFLTDEAKALEQDLICEAERVNEKFLSNLSEDEQQLFILLLNKINRLA

Sequences:

>Translated_157_residues
MMAHRESENALNLCGRRCCLNRHESLGYLVSHLNIELQNELDLHLKRYQLDIKLWPVLFALWQEEGISQTELSKRCDVAN
YTMTRLLDQLQVQGLITRHQEVDNRRAFQIFLTDEAKALEQDLICEAERVNEKFLSNLSEDEQQLFILLLNKINRLA
>Mature_157_residues
MMAHRESENALNLCGRRCCLNRHESLGYLVSHLNIELQNELDLHLKRYQLDIKLWPVLFALWQEEGISQTELSKRCDVAN
YTMTRLLDQLQVQGLITRHQEVDNRRAFQIFLTDEAKALEQDLICEAERVNEKFLSNLSEDEQQLFILLLNKINRLA

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18496; Mature: 18496

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMAHRESENALNLCGRRCCLNRHESLGYLVSHLNIELQNELDLHLKRYQLDIKLWPVLFA
CCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCEEECCHHHHHHHHHHHHHHHHHHHHH
LWQEEGISQTELSKRCDVANYTMTRLLDQLQVQGLITRHQEVDNRRAFQIFLTDEAKALE
HHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHH
QDLICEAERVNEKFLSNLSEDEQQLFILLLNKINRLA
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMAHRESENALNLCGRRCCLNRHESLGYLVSHLNIELQNELDLHLKRYQLDIKLWPVLFA
CCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCEEECCHHHHHHHHHHHHHHHHHHHHH
LWQEEGISQTELSKRCDVANYTMTRLLDQLQVQGLITRHQEVDNRRAFQIFLTDEAKALE
HHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHH
QDLICEAERVNEKFLSNLSEDEQQLFILLLNKINRLA
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA