Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120598573

Identifier: 120598573

GI number: 120598573

Start: 2019487

End: 2022042

Strand: Direct

Name: 120598573

Synonym: Sputw3181_1756

Alternate gene names: NA

Gene position: 2019487-2022042 (Clockwise)

Preceding gene: 120598568

Following gene: 120598575

Centisome position: 42.89

GC content: 43.86

Gene sequence:

>2556_bases
ATGAAGTCAGTGTATAAGGTTTTTCTTGTAGGATTATGTTCACTTTTCTTCGTTGCCTGTGGTGGTGGGGGCAGTATTTC
CGATGATGGTGGTACAACGCCGCCTGCTGACAAGTATGTTATTAAATTAGAACTGGTTAATGTTGATGGGCAGGCCATAT
CAACTATTTCAAATGCAACTCTTGGCAAGCTTATTACTACTGTGACTAAAAATGCGAGTCCACTGGTAGGTGCTCGAATT
GTATTTAACTTAGAAGGACAGGGAGGCTTAACACCTGATAGTGGTGTTACTAATACTGAAGGTAAAGTGTCTATTGATGT
TTTACCAGGTAATAAACTTGGCTCTGGAAGTATTACGGCTACATATGCACCAATCAGTGGAAGTGTTGTCACTTCAGTTC
CAATTTCTTTCAACACTAAAGGTGATGGTGGTGACGCTGGAGGTGGCCCTCAAGTAACATTAAAGCTAACCGACGCTGCA
GGAAATTCAATTAATAGCATTACATCGACAACGTCTGGCATATTGTCGGCAACGGTGACCGGACTCACTAAAACCGCGAT
AGTGACTTTTGATTCCACAATTGGTGATTTGCCCGTCAAGACGGCCATTACTGATCTCAATGGTAAAGCAAGCGTTAATT
TATATGCAGGTAGTACACCGGGTGCGGGGACTGCAACTGCGTCATTAAGTACGGGTGAGGTAGGGGAGCAAGTTTTTGTT
GTGGGTGCTACCAATGTGTTAATGGGAAGTGGCTCGCCTTTTGTTTCGGGTAAGGCTGATGTGAGTGCATTAACCTTATC
AGCAGGAGGGACTGCAACTATTTCAATCTCATTACAAGATGATCAGGGGAAAGCGTTTACTGAGCCAGTGGATGTTCGTT
TTGCTTCAACCTGTTCAAATAAAGCCAGCCCTGAAGCTATAATTAGTAGCCCCGTGACCGCGGTGGGTGGGCAGGCTACA
AGTACATATCTTGCCAAAGGATGTGTGGATGTTGACAATATTACGGTGACCGCGAATGTGGGTGGCAAAAACTTGTCAGC
GACGGGTAGCATTACAGTGTTGTCAGCAAGTGCAGGGAGTGTCGTTTTTGTTGATGCCACGCCCGAACATATTGGTATTA
AAGGGACTGGAATCAATGAGTCTTCTACTTTACGTTTTAGGGTATTAGATACCAACAATAATCCAGTCGCAAATAAAGCG
GTCAGTTTTAAATTGAATAATAATTCAGCTGGATTGACGTTAACCCCCGACACCGCAACATCAAACAATCAAGGGTATGT
ACAAACAGTGGTTAATTCCGGCACCGTTGCGACAACGGTAAGGGTTACGGCAAGTATTGATGGGACTAACCCATTAATTT
CCAGTCAATCCAATGTACTTGTTGTTTCCACAGGTAAACCAGATCAAGACAGTTTTTCACTCTCAGCTTCCGTTTTTAAT
GTTGAAGGTTGGAATTATGACGGCGCTAAGGTCACTATTACAGCCCGTCTAGCCGATGCCTTTAATAACCCTGTACCTGA
TGGAACCGCTGTAGTATTTACTGCTGAGGGTGGTTCGATAGAGAGTTCTTGCCAAACACAAAAAGGGGTTTGTTCCGTGG
TCTGGACAAGCCAGCAACCTCGTCCTGTGGGTGTTGATGGTAATGGACCACTTTTTGATGCAAATGGCAATCAGAACCAA
GATCCTAATGCAATGCTTAGAGCCGAGACCAATTTTGCCAGTAAAACATATCTGGGAAATTATTTTGGTCAGCCCTATGG
CGGTAGGGTGACTATTACTGCCACAGCCATTGGTGAGGAGTCATTTCCTGATTTAAACAGTAACAACATTCTCGATACTG
ATAGTGAGTTTAGTTTATTTGTGGGAACTCCTACGAATTGTGGTCGTGATAATAGTGGGGATTGTTATGATCTTACTGAG
GCATTTGTTGATCATAATGAAGATGGTATTTATACACCTAAATATCCAAAGAATGGTTCAACGGATACTTCTGGTGATCG
TGAGACTTTTACCGATTTTATTGACCCAGTTAACCCGACAGGACAAGGTGTCTTTGATTTAGCCGACGGAGAGTACAGTG
GTGTGTTATGTGACAATTCCGCAGCGGCATCAGTCAAATGCAGTCCGCAAGCATCCATCTCCGTACGCCGCTCACTTGTA
TTAGTGATGTCAGGAAGTGATGCGATTGCCACTCGTGCTGAAAATACCTTAATTGCCGATGCTATTCCCAATAATGGGCA
GATTGATATTGCGATTAAAGGCACTGCCTCCGTGATGTTTACTATCGCTGATATCAATAATCAACAAATGCCAGCTGGAA
CTGTGGTGAACTTTAAAGCAACGGGCGCGACGGTGACAAGTTCAACGAGTTACACATGGCCGAGTACAAATTATAACGGT
GGCCGTCAGTTTGTGGTTAGCTTAAAAGGTGGCGATCAAGCTGATTCAGGAAATCTAATTGTCACAGTTACCACTCCGGG
TGTAAAAGATGCGCAGGGAGGGGATATTGCTGGAACAACAACGGAGGTATTAAATATTCCTATTCTTGTGAGATAG

Upstream 100 bases:

>100_bases
GATGTAAAAATGTATAATTTTGGTGAAATTTGTGTGTTTTTACTCTATAGATTATAGGCATCTAGTTAGTATTATCATCT
AAGCAACAGGGAGCCTGACA

Downstream 100 bases:

>100_bases
CTCGATGTGCTAAAAACAAGGTGCTATTGGCACCTTGTTTGGATTGTTTTAAAGCACAACGCTATTTCTGGAATTGGTAG
ACGCTGCCAAGTTTCATGAT

Product: Ig domain-containing protein

Products: NA

Alternate protein names: Ig Domain Domain Protein; Intimin/Invasin Family Protein; Invasin Domain-Containing Protein; Lipoprotein

Number of amino acids: Translated: 851; Mature: 851

Protein sequence:

>851_residues
MKSVYKVFLVGLCSLFFVACGGGGSISDDGGTTPPADKYVIKLELVNVDGQAISTISNATLGKLITTVTKNASPLVGARI
VFNLEGQGGLTPDSGVTNTEGKVSIDVLPGNKLGSGSITATYAPISGSVVTSVPISFNTKGDGGDAGGGPQVTLKLTDAA
GNSINSITSTTSGILSATVTGLTKTAIVTFDSTIGDLPVKTAITDLNGKASVNLYAGSTPGAGTATASLSTGEVGEQVFV
VGATNVLMGSGSPFVSGKADVSALTLSAGGTATISISLQDDQGKAFTEPVDVRFASTCSNKASPEAIISSPVTAVGGQAT
STYLAKGCVDVDNITVTANVGGKNLSATGSITVLSASAGSVVFVDATPEHIGIKGTGINESSTLRFRVLDTNNNPVANKA
VSFKLNNNSAGLTLTPDTATSNNQGYVQTVVNSGTVATTVRVTASIDGTNPLISSQSNVLVVSTGKPDQDSFSLSASVFN
VEGWNYDGAKVTITARLADAFNNPVPDGTAVVFTAEGGSIESSCQTQKGVCSVVWTSQQPRPVGVDGNGPLFDANGNQNQ
DPNAMLRAETNFASKTYLGNYFGQPYGGRVTITATAIGEESFPDLNSNNILDTDSEFSLFVGTPTNCGRDNSGDCYDLTE
AFVDHNEDGIYTPKYPKNGSTDTSGDRETFTDFIDPVNPTGQGVFDLADGEYSGVLCDNSAAASVKCSPQASISVRRSLV
LVMSGSDAIATRAENTLIADAIPNNGQIDIAIKGTASVMFTIADINNQQMPAGTVVNFKATGATVTSSTSYTWPSTNYNG
GRQFVVSLKGGDQADSGNLIVTVTTPGVKDAQGGDIAGTTTEVLNIPILVR

Sequences:

>Translated_851_residues
MKSVYKVFLVGLCSLFFVACGGGGSISDDGGTTPPADKYVIKLELVNVDGQAISTISNATLGKLITTVTKNASPLVGARI
VFNLEGQGGLTPDSGVTNTEGKVSIDVLPGNKLGSGSITATYAPISGSVVTSVPISFNTKGDGGDAGGGPQVTLKLTDAA
GNSINSITSTTSGILSATVTGLTKTAIVTFDSTIGDLPVKTAITDLNGKASVNLYAGSTPGAGTATASLSTGEVGEQVFV
VGATNVLMGSGSPFVSGKADVSALTLSAGGTATISISLQDDQGKAFTEPVDVRFASTCSNKASPEAIISSPVTAVGGQAT
STYLAKGCVDVDNITVTANVGGKNLSATGSITVLSASAGSVVFVDATPEHIGIKGTGINESSTLRFRVLDTNNNPVANKA
VSFKLNNNSAGLTLTPDTATSNNQGYVQTVVNSGTVATTVRVTASIDGTNPLISSQSNVLVVSTGKPDQDSFSLSASVFN
VEGWNYDGAKVTITARLADAFNNPVPDGTAVVFTAEGGSIESSCQTQKGVCSVVWTSQQPRPVGVDGNGPLFDANGNQNQ
DPNAMLRAETNFASKTYLGNYFGQPYGGRVTITATAIGEESFPDLNSNNILDTDSEFSLFVGTPTNCGRDNSGDCYDLTE
AFVDHNEDGIYTPKYPKNGSTDTSGDRETFTDFIDPVNPTGQGVFDLADGEYSGVLCDNSAAASVKCSPQASISVRRSLV
LVMSGSDAIATRAENTLIADAIPNNGQIDIAIKGTASVMFTIADINNQQMPAGTVVNFKATGATVTSSTSYTWPSTNYNG
GRQFVVSLKGGDQADSGNLIVTVTTPGVKDAQGGDIAGTTTEVLNIPILVR
>Mature_851_residues
MKSVYKVFLVGLCSLFFVACGGGGSISDDGGTTPPADKYVIKLELVNVDGQAISTISNATLGKLITTVTKNASPLVGARI
VFNLEGQGGLTPDSGVTNTEGKVSIDVLPGNKLGSGSITATYAPISGSVVTSVPISFNTKGDGGDAGGGPQVTLKLTDAA
GNSINSITSTTSGILSATVTGLTKTAIVTFDSTIGDLPVKTAITDLNGKASVNLYAGSTPGAGTATASLSTGEVGEQVFV
VGATNVLMGSGSPFVSGKADVSALTLSAGGTATISISLQDDQGKAFTEPVDVRFASTCSNKASPEAIISSPVTAVGGQAT
STYLAKGCVDVDNITVTANVGGKNLSATGSITVLSASAGSVVFVDATPEHIGIKGTGINESSTLRFRVLDTNNNPVANKA
VSFKLNNNSAGLTLTPDTATSNNQGYVQTVVNSGTVATTVRVTASIDGTNPLISSQSNVLVVSTGKPDQDSFSLSASVFN
VEGWNYDGAKVTITARLADAFNNPVPDGTAVVFTAEGGSIESSCQTQKGVCSVVWTSQQPRPVGVDGNGPLFDANGNQNQ
DPNAMLRAETNFASKTYLGNYFGQPYGGRVTITATAIGEESFPDLNSNNILDTDSEFSLFVGTPTNCGRDNSGDCYDLTE
AFVDHNEDGIYTPKYPKNGSTDTSGDRETFTDFIDPVNPTGQGVFDLADGEYSGVLCDNSAAASVKCSPQASISVRRSLV
LVMSGSDAIATRAENTLIADAIPNNGQIDIAIKGTASVMFTIADINNQQMPAGTVVNFKATGATVTSSTSYTWPSTNYNG
GRQFVVSLKGGDQADSGNLIVTVTTPGVKDAQGGDIAGTTTEVLNIPILVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 86712; Mature: 86712

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51127 BIG1 L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSVYKVFLVGLCSLFFVACGGGGSISDDGGTTPPADKYVIKLELVNVDGQAISTISNAT
CCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHCCCH
LGKLITTVTKNASPLVGARIVFNLEGQGGLTPDSGVTNTEGKVSIDVLPGNKLGSGSITA
HHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEE
TYAPISGSVVTSVPISFNTKGDGGDAGGGPQVTLKLTDAAGNSINSITSTTSGILSATVT
EECCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCHHHCCCCHHHHEEEC
GLTKTAIVTFDSTIGDLPVKTAITDLNGKASVNLYAGSTPGAGTATASLSTGEVGEQVFV
CCEEEEEEEECCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCEEEEEECCCCCCCEEEE
VGATNVLMGSGSPFVSGKADVSALTLSAGGTATISISLQDDQGKAFTEPVDVRFASTCSN
EEECEEEEECCCCCCCCCCCEEEEEEECCCEEEEEEEEECCCCCEECCCEEEEEEECCCC
KASPEAIISSPVTAVGGQATSTYLAKGCVDVDNITVTANVGGKNLSATGSITVLSASAGS
CCCCHHHHCCCCHHCCCCCHHHHHHHCCEEECCEEEEEECCCCCEECCCEEEEEEECCCC
VVFVDATPEHIGIKGTGINESSTLRFRVLDTNNNPVANKAVSFKLNNNSAGLTLTPDTAT
EEEEECCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCCCEEECCCCCC
SNNQGYVQTVVNSGTVATTVRVTASIDGTNPLISSQSNVLVVSTGKPDQDSFSLSASVFN
CCCCCEEEEEECCCEEEEEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEEE
VEGWNYDGAKVTITARLADAFNNPVPDGTAVVFTAEGGSIESSCQTQKGVCSVVWTSQQP
ECCCCCCCCEEEEEEEEHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCC
RPVGVDGNGPLFDANGNQNQDPNAMLRAETNFASKTYLGNYFGQPYGGRVTITATAIGEE
CEEECCCCCCEECCCCCCCCCCCEEEEEECCCCCCEEHHHHCCCCCCCEEEEEEEECCCC
SFPDLNSNNILDTDSEFSLFVGTPTNCGRDNSGDCYDLTEAFVDHNEDGIYTPKYPKNGS
CCCCCCCCCEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCEECCCCCCCCC
TDTSGDRETFTDFIDPVNPTGQGVFDLADGEYSGVLCDNSAAASVKCSPQASISVRRSLV
CCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCEEEECCCCCCEEEECCCCCEEEEEEEE
LVMSGSDAIATRAENTLIADAIPNNGQIDIAIKGTASVMFTIADINNQQMPAGTVVNFKA
EEEECCCCEEECCCCEEEEECCCCCCEEEEEEECCCEEEEEEEECCCCCCCCCEEEEEEE
TGATVTSSTSYTWPSTNYNGGRQFVVSLKGGDQADSGNLIVTVTTPGVKDAQGGDIAGTT
CCCEEECCCEEECCCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCE
TEVLNIPILVR
EHEEEEEEEEC
>Mature Secondary Structure
MKSVYKVFLVGLCSLFFVACGGGGSISDDGGTTPPADKYVIKLELVNVDGQAISTISNAT
CCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHCCCH
LGKLITTVTKNASPLVGARIVFNLEGQGGLTPDSGVTNTEGKVSIDVLPGNKLGSGSITA
HHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEE
TYAPISGSVVTSVPISFNTKGDGGDAGGGPQVTLKLTDAAGNSINSITSTTSGILSATVT
EECCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCHHHCCCCHHHHEEEC
GLTKTAIVTFDSTIGDLPVKTAITDLNGKASVNLYAGSTPGAGTATASLSTGEVGEQVFV
CCEEEEEEEECCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCEEEEEECCCCCCCEEEE
VGATNVLMGSGSPFVSGKADVSALTLSAGGTATISISLQDDQGKAFTEPVDVRFASTCSN
EEECEEEEECCCCCCCCCCCEEEEEEECCCEEEEEEEEECCCCCEECCCEEEEEEECCCC
KASPEAIISSPVTAVGGQATSTYLAKGCVDVDNITVTANVGGKNLSATGSITVLSASAGS
CCCCHHHHCCCCHHCCCCCHHHHHHHCCEEECCEEEEEECCCCCEECCCEEEEEEECCCC
VVFVDATPEHIGIKGTGINESSTLRFRVLDTNNNPVANKAVSFKLNNNSAGLTLTPDTAT
EEEEECCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCCCEEECCCCCC
SNNQGYVQTVVNSGTVATTVRVTASIDGTNPLISSQSNVLVVSTGKPDQDSFSLSASVFN
CCCCCEEEEEECCCEEEEEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEEE
VEGWNYDGAKVTITARLADAFNNPVPDGTAVVFTAEGGSIESSCQTQKGVCSVVWTSQQP
ECCCCCCCCEEEEEEEEHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCC
RPVGVDGNGPLFDANGNQNQDPNAMLRAETNFASKTYLGNYFGQPYGGRVTITATAIGEE
CEEECCCCCCEECCCCCCCCCCCEEEEEECCCCCCEEHHHHCCCCCCCEEEEEEEECCCC
SFPDLNSNNILDTDSEFSLFVGTPTNCGRDNSGDCYDLTEAFVDHNEDGIYTPKYPKNGS
CCCCCCCCCEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCEECCCCCCCCC
TDTSGDRETFTDFIDPVNPTGQGVFDLADGEYSGVLCDNSAAASVKCSPQASISVRRSLV
CCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCEEEECCCCCCEEEECCCCCEEEEEEEE
LVMSGSDAIATRAENTLIADAIPNNGQIDIAIKGTASVMFTIADINNQQMPAGTVVNFKA
EEEECCCCEEECCCCEEEEECCCCCCEEEEEEECCCEEEEEEEECCCCCCCCCEEEEEEE
TGATVTSSTSYTWPSTNYNGGRQFVVSLKGGDQADSGNLIVTVTTPGVKDAQGGDIAGTT
CCCEEECCCEEECCCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCE
TEVLNIPILVR
EHEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA