Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120598499

Identifier: 120598499

GI number: 120598499

Start: 1940358

End: 1941830

Strand: Direct

Name: 120598499

Synonym: Sputw3181_1682

Alternate gene names: NA

Gene position: 1940358-1941830 (Clockwise)

Preceding gene: 120598498

Following gene: 120598505

Centisome position: 41.21

GC content: 44.47

Gene sequence:

>1473_bases
ATGTACTTGAATCCCGTTACCGCCATTGATGGCTATAAAGTCGACCACCGTCGTCAATATCCCGATAATACTCAAGTGAT
TTTTAGTAACTTAACCGCCCGTAAATCCCGTCGTGGTTATACTGACCAAATGGTGTTTTTTGGCTTGCAATATTTTATCA
AGCATTTCTTGATCGACAGTTGGAACCGTGATTTCTTTCAACAACCTAAAGAGCAGGTCATTCGCCAATTCTCCCGCCGT
ATCAATAACTATCTCGGGCCGAATAACGTCGGCACTCAGCATATTGAGGAGTTGCATGATTTAGGCTATTTACCCATTAA
AATTATGGCATTACCTGAAGGCTCAGTGTATCCATTAAAAGTGCCTTGCTTGATTTTATACAATACTGATGAGCGATTCT
TTTGGTTGACTAATTATCTCGAAACTATCCTTTCCGCTAATGTGTGGGGTATGTGTACCAGTGCCACTACCGCGCTGCAA
TACCGCAAAATATTTGAGACTTATGCGTTAGAAACCGATGGTGACATCGCTTTTGTTGATTGGCAGGGTCACGATTTTAG
TTTCCGTGGCATGTATGGTGCAGAGGCTGCTGTTATGAGCGGCGCCGCCCATTTACTCAGTTTTACTGGGACTGATACCA
TACCCGCCATTGATTTTCTTGAACAATATTATCTTGCAGACAGTGATAAGGAACTCGTTGGTGGCAGTGTGGCCGCAACG
GAGCACAGTGTGATGTGTGCGGGTGGTATGGAGAATGAATTAGAGACGTTCCGCCGCTTGATCGAAGATATTTATCCTAC
GGGCATTGTCAGTATCGTTTCTGATTCTTGGGATTTTTGGCAGGTGATGACAGAGTTCACCTTAGCGTTAAAAGACCGCA
TTCTTGCCCGCGATGGCAAAGTGGTGTTTAGGCCCGATACGGGTTGTCCTGTGAAGATCATTTGTGGCGATCCACAAGCA
CCAATCGGGAGTCCCGAATATAAAGGCGCTATTGAGTGTCTGTGGGACGTCTTTGGGGGCAGCACAACTGCCAAAGGTTA
CAAAGCGCTGAATAGCCATGTTGGACTGATTTATGGCGATTCAATCACCATTGAACGTGCTGAAGCCATTTGTGCCGGCT
TAAAGGCCAAAGGTTTTGCGTCAACCAATATTGTGTTTGGGATTGGCAGTTTTACCTATCAACACGTGACCCGAGATACT
GACGGTTACGCGGTGAAAGCAACCTTTGCGAAAGTGGATGGCAAAGACAGAGAAATATTTAAAGATCCTAAAACAGATGA
TGGCACTAAAAAATCCGCTAAGGGTTTAGTGGCGGTATTTAAAGATGAGCAGGGTCAATTTTATCTTAAAGATCAAGCCA
GCTGGCAAGATGTTAACAATTGCGAGTTTGTTCCTGTATTTGCCGATGGTGAACTATTAACGGAATATTCTTTGGCAGAT
ATTCGCGCAAGGTTGGCAGAGTCTAGAAGTTGA

Upstream 100 bases:

>100_bases
TTATTTTGTACCGATAGTTTAGGTGTCCCTACACATATTTCGAGCGAGTTCTGCCATTGCCATGCTGTTTTGAGTTATAT
GAATCATTAAGGAAAATATT

Downstream 100 bases:

>100_bases
GCCTATCGATTTTTGATTTTTAACGGCTATCGACAATAGCGAAGATAAAACTGGCAATGCGATTTCTATTAGGGTCATAT
TGTCAGTTAAGTTTTACATT

Product: putative nicotinate phosphoribosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 490; Mature: 490

Protein sequence:

>490_residues
MYLNPVTAIDGYKVDHRRQYPDNTQVIFSNLTARKSRRGYTDQMVFFGLQYFIKHFLIDSWNRDFFQQPKEQVIRQFSRR
INNYLGPNNVGTQHIEELHDLGYLPIKIMALPEGSVYPLKVPCLILYNTDERFFWLTNYLETILSANVWGMCTSATTALQ
YRKIFETYALETDGDIAFVDWQGHDFSFRGMYGAEAAVMSGAAHLLSFTGTDTIPAIDFLEQYYLADSDKELVGGSVAAT
EHSVMCAGGMENELETFRRLIEDIYPTGIVSIVSDSWDFWQVMTEFTLALKDRILARDGKVVFRPDTGCPVKIICGDPQA
PIGSPEYKGAIECLWDVFGGSTTAKGYKALNSHVGLIYGDSITIERAEAICAGLKAKGFASTNIVFGIGSFTYQHVTRDT
DGYAVKATFAKVDGKDREIFKDPKTDDGTKKSAKGLVAVFKDEQGQFYLKDQASWQDVNNCEFVPVFADGELLTEYSLAD
IRARLAESRS

Sequences:

>Translated_490_residues
MYLNPVTAIDGYKVDHRRQYPDNTQVIFSNLTARKSRRGYTDQMVFFGLQYFIKHFLIDSWNRDFFQQPKEQVIRQFSRR
INNYLGPNNVGTQHIEELHDLGYLPIKIMALPEGSVYPLKVPCLILYNTDERFFWLTNYLETILSANVWGMCTSATTALQ
YRKIFETYALETDGDIAFVDWQGHDFSFRGMYGAEAAVMSGAAHLLSFTGTDTIPAIDFLEQYYLADSDKELVGGSVAAT
EHSVMCAGGMENELETFRRLIEDIYPTGIVSIVSDSWDFWQVMTEFTLALKDRILARDGKVVFRPDTGCPVKIICGDPQA
PIGSPEYKGAIECLWDVFGGSTTAKGYKALNSHVGLIYGDSITIERAEAICAGLKAKGFASTNIVFGIGSFTYQHVTRDT
DGYAVKATFAKVDGKDREIFKDPKTDDGTKKSAKGLVAVFKDEQGQFYLKDQASWQDVNNCEFVPVFADGELLTEYSLAD
IRARLAESRS
>Mature_490_residues
MYLNPVTAIDGYKVDHRRQYPDNTQVIFSNLTARKSRRGYTDQMVFFGLQYFIKHFLIDSWNRDFFQQPKEQVIRQFSRR
INNYLGPNNVGTQHIEELHDLGYLPIKIMALPEGSVYPLKVPCLILYNTDERFFWLTNYLETILSANVWGMCTSATTALQ
YRKIFETYALETDGDIAFVDWQGHDFSFRGMYGAEAAVMSGAAHLLSFTGTDTIPAIDFLEQYYLADSDKELVGGSVAAT
EHSVMCAGGMENELETFRRLIEDIYPTGIVSIVSDSWDFWQVMTEFTLALKDRILARDGKVVFRPDTGCPVKIICGDPQA
PIGSPEYKGAIECLWDVFGGSTTAKGYKALNSHVGLIYGDSITIERAEAICAGLKAKGFASTNIVFGIGSFTYQHVTRDT
DGYAVKATFAKVDGKDREIFKDPKTDDGTKKSAKGLVAVFKDEQGQFYLKDQASWQDVNNCEFVPVFADGELLTEYSLAD
IRARLAESRS

Specific function: Unknown

COG id: COG1488

COG function: function code H; Nicotinic acid phosphoribosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NAPRTase family [H]

Homologues:

Organism=Homo sapiens, GI5031977, Length=493, Percent_Identity=31.0344827586207, Blast_Score=214, Evalue=1e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015977
- InterPro:   IPR016471
- InterPro:   IPR002638 [H]

Pfam domain/function: PF04095 NAPRTase [H]

EC number: NA

Molecular weight: Translated: 55063; Mature: 55063

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLNPVTAIDGYKVDHRRQYPDNTQVIFSNLTARKSRRGYTDQMVFFGLQYFIKHFLIDS
CCCCCCCCCCCEECCCCCCCCCCCEEEEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC
WNRDFFQQPKEQVIRQFSRRINNYLGPNNVGTQHIEELHDLGYLPIKIMALPEGSVYPLK
CCHHHHHCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCEEEEE
VPCLILYNTDERFFWLTNYLETILSANVWGMCTSATTALQYRKIFETYALETDGDIAFVD
EEEEEEEECCCCEEEHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
WQGHDFSFRGMYGAEAAVMSGAAHLLSFTGTDTIPAIDFLEQYYLADSDKELVGGSVAAT
ECCCCEEECCCCCCHHHHHHCHHHHEEECCCCCCHHHHHHHHHHCCCCCCHHCCCEEEEC
EHSVMCAGGMENELETFRRLIEDIYPTGIVSIVSDSWDFWQVMTEFTLALKDRILARDGK
CCCEEECCCCHHHHHHHHHHHHHHCCCCEEEHHCCCHHHHHHHHHHHHHHHHHHHCCCCC
VVFRPDTGCPVKIICGDPQAPIGSPEYKGAIECLWDVFGGSTTAKGYKALNSHVGLIYGD
EEEECCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCEEEEECC
SITIERAEAICAGLKAKGFASTNIVFGIGSFTYQHVTRDTDGYAVKATFAKVDGKDREIF
CEEEHHHHHHHHCCCCCCCCCCEEEEEECCCEEHHHCCCCCCEEEEEEEEECCCCCHHHH
KDPKTDDGTKKSAKGLVAVFKDEQGQFYLKDQASWQDVNNCEFVPVFADGELLTEYSLAD
CCCCCCCCCCHHCCCEEEEEECCCCCEEEECCCCCCCCCCCEEEEEEECCCHHHHHHHHH
IRARLAESRS
HHHHHHHCCC
>Mature Secondary Structure
MYLNPVTAIDGYKVDHRRQYPDNTQVIFSNLTARKSRRGYTDQMVFFGLQYFIKHFLIDS
CCCCCCCCCCCEECCCCCCCCCCCEEEEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC
WNRDFFQQPKEQVIRQFSRRINNYLGPNNVGTQHIEELHDLGYLPIKIMALPEGSVYPLK
CCHHHHHCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCEEEEE
VPCLILYNTDERFFWLTNYLETILSANVWGMCTSATTALQYRKIFETYALETDGDIAFVD
EEEEEEEECCCCEEEHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
WQGHDFSFRGMYGAEAAVMSGAAHLLSFTGTDTIPAIDFLEQYYLADSDKELVGGSVAAT
ECCCCEEECCCCCCHHHHHHCHHHHEEECCCCCCHHHHHHHHHHCCCCCCHHCCCEEEEC
EHSVMCAGGMENELETFRRLIEDIYPTGIVSIVSDSWDFWQVMTEFTLALKDRILARDGK
CCCEEECCCCHHHHHHHHHHHHHHCCCCEEEHHCCCHHHHHHHHHHHHHHHHHHHCCCCC
VVFRPDTGCPVKIICGDPQAPIGSPEYKGAIECLWDVFGGSTTAKGYKALNSHVGLIYGD
EEEECCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCEEEEECC
SITIERAEAICAGLKAKGFASTNIVFGIGSFTYQHVTRDTDGYAVKATFAKVDGKDREIF
CEEEHHHHHHHHCCCCCCCCCCEEEEEECCCEEHHHCCCCCCEEEEEEEEECCCCCHHHH
KDPKTDDGTKKSAKGLVAVFKDEQGQFYLKDQASWQDVNNCEFVPVFADGELLTEYSLAD
CCCCCCCCCCHHCCCEEEEEECCCCCEEEECCCCCCCCCCCEEEEEEECCCHHHHHHHHH
IRARLAESRS
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8948633 [H]