Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120598497

Identifier: 120598497

GI number: 120598497

Start: 1938388

End: 1939101

Strand: Direct

Name: 120598497

Synonym: Sputw3181_1680

Alternate gene names: NA

Gene position: 1938388-1939101 (Clockwise)

Preceding gene: 120598496

Following gene: 120598498

Centisome position: 41.17

GC content: 43.42

Gene sequence:

>714_bases
ATGACTGAAGCGGAATATCTCGCCAATTACGATCCTAAGGTTTTTAAGGCTCAGCTACTGACAGTGGATGCCGTATTGTT
TACCTATCACGATCAGCAACTTAAAGTACTCCTAGTACAACGCTCAAATCATCCATTTTTAGGTTTATGGGGATTACCTG
GTGGGTTTATCGATGAAAATTGCGATCAATCCCTTGAGCAAACTGTATTACGTAAACTGCAGGAAAAAACCGCAGTAGTG
CCACCTTATATTGAGCAGCTATGCACTGTGGGTAATTGTAGTCGTGATATAAGAGGCTGGTCTGTGACTGTATGTTATAC
CGCCTTGATGAGTTATCAAGCTTGCCAAATCCAGATTGATTCAGTGAGTGATGTTAAGTGGTGGCCACTAGTGGATGTGT
TGCAGATGCCCTTGGCGTTTGATCATCTGCAGTTAATCGAGCAAGCGCGGGAACGCTTAACACAAAAAGCCTTATATTCT
TTAGTGCCAGGATTTGCACTGTCTGAACCTTTTACCTTGCCAGAATTGCAGCATGTACATGAGGTTCTACTGGGTAAGCC
TATCCAAGGTAAATCTTTTCGTCGGCGGGTTGAACAGGCCGATTTATTGATCGATACGGGATTAAAGCGCACCGAACGGG
GTCGTCCTGCTAATTTATACCGCTTGAAACCCAATACCGCATCGTATCGCTTCTTAAGAAATTTAGAATGTTAA

Upstream 100 bases:

>100_bases
CTGTGCCTCTGATCATTGACTTAGTGACGCTAAGACATAATATGTTTGAAGCTATGTAATGCTAAGTTAAACTGATGATT
TGTAACGATGGGGAATATCA

Downstream 100 bases:

>100_bases
TCACAGTGAATGTGGATTTAAGCAAGATATTCGCCTTGCTCAATATGAGTAACAGCAACTGCTTATGCCTTATTCATGGT
GACTTTGAATCAGTAAAGGC

Product: NUDIX hydrolase

Products: NA

Alternate protein names: DNA Hydrolase; ADP-Ribose Pyrophosphatase; NUDIX Family Hydrolase; MutT/Nudix Family Protein; Nudix Hydrolase; Hydrolase; Hydrolase NUDIX Family; Hydrolase NUDIX Family Protein; Phosphohydrolase; MutT/NUDIX Family DNA Hydrolase; NUDIX Domain-Containing Protein; Nudix Hydrolase Family Protein; MutT/Nudix Family DNA Hydrolase; NTP Pyrophosphohydrolase; Hydrolase MutT/Nudix Family Protein; Hydrolase Nudix Family; DNA Hydrolase Protein MutT/Nudix Family

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MTEAEYLANYDPKVFKAQLLTVDAVLFTYHDQQLKVLLVQRSNHPFLGLWGLPGGFIDENCDQSLEQTVLRKLQEKTAVV
PPYIEQLCTVGNCSRDIRGWSVTVCYTALMSYQACQIQIDSVSDVKWWPLVDVLQMPLAFDHLQLIEQARERLTQKALYS
LVPGFALSEPFTLPELQHVHEVLLGKPIQGKSFRRRVEQADLLIDTGLKRTERGRPANLYRLKPNTASYRFLRNLEC

Sequences:

>Translated_237_residues
MTEAEYLANYDPKVFKAQLLTVDAVLFTYHDQQLKVLLVQRSNHPFLGLWGLPGGFIDENCDQSLEQTVLRKLQEKTAVV
PPYIEQLCTVGNCSRDIRGWSVTVCYTALMSYQACQIQIDSVSDVKWWPLVDVLQMPLAFDHLQLIEQARERLTQKALYS
LVPGFALSEPFTLPELQHVHEVLLGKPIQGKSFRRRVEQADLLIDTGLKRTERGRPANLYRLKPNTASYRFLRNLEC
>Mature_236_residues
TEAEYLANYDPKVFKAQLLTVDAVLFTYHDQQLKVLLVQRSNHPFLGLWGLPGGFIDENCDQSLEQTVLRKLQEKTAVVP
PYIEQLCTVGNCSRDIRGWSVTVCYTALMSYQACQIQIDSVSDVKWWPLVDVLQMPLAFDHLQLIEQARERLTQKALYSL
VPGFALSEPFTLPELQHVHEVLLGKPIQGKSFRRRVEQADLLIDTGLKRTERGRPANLYRLKPNTASYRFLRNLEC

Specific function: Unknown

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27208; Mature: 27077

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEAEYLANYDPKVFKAQLLTVDAVLFTYHDQQLKVLLVQRSNHPFLGLWGLPGGFIDEN
CCCCHHHHCCCCHHHHHHHHHHHHHHHEECCCCEEEEEEECCCCCEEEECCCCCCCCCCH
CDQSLEQTVLRKLQEKTAVVPPYIEQLCTVGNCSRDIRGWSVTVCYTALMSYQACQIQID
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCHHEEEEEC
SVSDVKWWPLVDVLQMPLAFDHLQLIEQARERLTQKALYSLVPGFALSEPFTLPELQHVH
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
EVLLGKPIQGKSFRRRVEQADLLIDTGLKRTERGRPANLYRLKPNTASYRFLRNLEC
HHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHCCCCCCCEEEECCCCHHHHHHHCCCC
>Mature Secondary Structure 
TEAEYLANYDPKVFKAQLLTVDAVLFTYHDQQLKVLLVQRSNHPFLGLWGLPGGFIDEN
CCCHHHHCCCCHHHHHHHHHHHHHHHEECCCCEEEEEEECCCCCEEEECCCCCCCCCCH
CDQSLEQTVLRKLQEKTAVVPPYIEQLCTVGNCSRDIRGWSVTVCYTALMSYQACQIQID
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCHHEEEEEC
SVSDVKWWPLVDVLQMPLAFDHLQLIEQARERLTQKALYSLVPGFALSEPFTLPELQHVH
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
EVLLGKPIQGKSFRRRVEQADLLIDTGLKRTERGRPANLYRLKPNTASYRFLRNLEC
HHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHCCCCCCCEEEECCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA