| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is cctA [H]
Identifier: 120598492
GI number: 120598492
Start: 1934243
End: 1934593
Strand: Direct
Name: cctA [H]
Synonym: Sputw3181_1675
Alternate gene names: 120598492
Gene position: 1934243-1934593 (Clockwise)
Preceding gene: 120598491
Following gene: 120598493
Centisome position: 41.08
GC content: 45.58
Gene sequence:
>351_bases GTGAGCAAAAAACTATTAAGTGCACTTTTCGGGGCAAGTCTCGCAGCGCTAGCGCTGTCGCCAACCGCATTTGCTGCAGG TCAAAAACTATCAGATTTTCACGCCGAATCGGGTGGATGTGAGAGTTGCCATAAGGATGGTTCACCTTCCGCTGATGGTG CTTTTGAATTTGAACAGTGTCAAAGCTGCCACGGATCTCTTGCTGAGATGGACGCAGTTCATAAACCGCATGATGGCAGT TTAGTGTGTGCAGATTGTCACAAAGTACATGATATGAATGTAGGTGAAAAACCTACTTGTGAGAGCTGCCATGATGATGG TCGTACATCTGGATCTGTTTTGAAAAAATAG
Upstream 100 bases:
>100_bases TAGCTAAGTTAGATCGAGTCGTGCTATTTATTTTTGGTTGCGAGATGGAAGTCACCCTGACAAGAACTTCCACTGACAAT CGCCATTGGAGGATACTATT
Downstream 100 bases:
>100_bases ACCCGAGCTCTGTTGGTGTTAGCCATCAGTTCTATATCAAAAAATGCCAGCAATTTGCTGGCATTTTTTATGATGATAAT TTTTAGCAAATCTCGAGTTA
Product: cytochrome c3
Products: NA
Alternate protein names: Cytochrome c3 [H]
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MSKKLLSALFGASLAALALSPTAFAAGQKLSDFHAESGGCESCHKDGSPSADGAFEFEQCQSCHGSLAEMDAVHKPHDGS LVCADCHKVHDMNVGEKPTCESCHDDGRTSGSVLKK
Sequences:
>Translated_116_residues MSKKLLSALFGASLAALALSPTAFAAGQKLSDFHAESGGCESCHKDGSPSADGAFEFEQCQSCHGSLAEMDAVHKPHDGS LVCADCHKVHDMNVGEKPTCESCHDDGRTSGSVLKK >Mature_115_residues SKKLLSALFGASLAALALSPTAFAAGQKLSDFHAESGGCESCHKDGSPSADGAFEFEQCQSCHGSLAEMDAVHKPHDGSL VCADCHKVHDMNVGEKPTCESCHDDGRTSGSVLKK
Specific function: Transfers electrons to ferredoxin III [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011031 - InterPro: IPR012286 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12065; Mature: 11934
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 9.5 %Cys+Met (Translated Protein) 7.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 8.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKLLSALFGASLAALALSPTAFAAGQKLSDFHAESGGCESCHKDGSPSADGAFEFEQC CCHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHH QSCHGSLAEMDAVHKPHDGSLVCADCHKVHDMNVGEKPTCESCHDDGRTSGSVLKK HHHCCCHHHHHHCCCCCCCCEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SKKLLSALFGASLAALALSPTAFAAGQKLSDFHAESGGCESCHKDGSPSADGAFEFEQC CHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHH QSCHGSLAEMDAVHKPHDGSLVCADCHKVHDMNVGEKPTCESCHDDGRTSGSVLKK HHHCCCHHHHHHCCCCCCCCEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11231004 [H]