Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is cctA [H]

Identifier: 120598492

GI number: 120598492

Start: 1934243

End: 1934593

Strand: Direct

Name: cctA [H]

Synonym: Sputw3181_1675

Alternate gene names: 120598492

Gene position: 1934243-1934593 (Clockwise)

Preceding gene: 120598491

Following gene: 120598493

Centisome position: 41.08

GC content: 45.58

Gene sequence:

>351_bases
GTGAGCAAAAAACTATTAAGTGCACTTTTCGGGGCAAGTCTCGCAGCGCTAGCGCTGTCGCCAACCGCATTTGCTGCAGG
TCAAAAACTATCAGATTTTCACGCCGAATCGGGTGGATGTGAGAGTTGCCATAAGGATGGTTCACCTTCCGCTGATGGTG
CTTTTGAATTTGAACAGTGTCAAAGCTGCCACGGATCTCTTGCTGAGATGGACGCAGTTCATAAACCGCATGATGGCAGT
TTAGTGTGTGCAGATTGTCACAAAGTACATGATATGAATGTAGGTGAAAAACCTACTTGTGAGAGCTGCCATGATGATGG
TCGTACATCTGGATCTGTTTTGAAAAAATAG

Upstream 100 bases:

>100_bases
TAGCTAAGTTAGATCGAGTCGTGCTATTTATTTTTGGTTGCGAGATGGAAGTCACCCTGACAAGAACTTCCACTGACAAT
CGCCATTGGAGGATACTATT

Downstream 100 bases:

>100_bases
ACCCGAGCTCTGTTGGTGTTAGCCATCAGTTCTATATCAAAAAATGCCAGCAATTTGCTGGCATTTTTTATGATGATAAT
TTTTAGCAAATCTCGAGTTA

Product: cytochrome c3

Products: NA

Alternate protein names: Cytochrome c3 [H]

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MSKKLLSALFGASLAALALSPTAFAAGQKLSDFHAESGGCESCHKDGSPSADGAFEFEQCQSCHGSLAEMDAVHKPHDGS
LVCADCHKVHDMNVGEKPTCESCHDDGRTSGSVLKK

Sequences:

>Translated_116_residues
MSKKLLSALFGASLAALALSPTAFAAGQKLSDFHAESGGCESCHKDGSPSADGAFEFEQCQSCHGSLAEMDAVHKPHDGS
LVCADCHKVHDMNVGEKPTCESCHDDGRTSGSVLKK
>Mature_115_residues
SKKLLSALFGASLAALALSPTAFAAGQKLSDFHAESGGCESCHKDGSPSADGAFEFEQCQSCHGSLAEMDAVHKPHDGSL
VCADCHKVHDMNVGEKPTCESCHDDGRTSGSVLKK

Specific function: Transfers electrons to ferredoxin III [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011031
- InterPro:   IPR012286 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12065; Mature: 11934

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
9.5 %Cys+Met (Translated Protein)
7.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
8.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKLLSALFGASLAALALSPTAFAAGQKLSDFHAESGGCESCHKDGSPSADGAFEFEQC
CCHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHH
QSCHGSLAEMDAVHKPHDGSLVCADCHKVHDMNVGEKPTCESCHDDGRTSGSVLKK
HHHCCCHHHHHHCCCCCCCCEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SKKLLSALFGASLAALALSPTAFAAGQKLSDFHAESGGCESCHKDGSPSADGAFEFEQC
CHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHH
QSCHGSLAEMDAVHKPHDGSLVCADCHKVHDMNVGEKPTCESCHDDGRTSGSVLKK
HHHCCCHHHHHHCCCCCCCCEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11231004 [H]