Click here to switch to the map view.

The map label for this gene is yfbV [C]

Identifier: 120598446

GI number: 120598446

Start: 1858563

End: 1859060

Strand: Direct

Name: yfbV [C]

Synonym: Sputw3181_1629

Alternate gene names: 120598446

Gene position: 1858563-1859060 (Clockwise)

Preceding gene: 120598443

Following gene: 120598450

Centisome position: 39.47

GC content: 45.38

Gene sequence:

>498_bases
GTGCCAAATTATGCTATGGTAAAAACAGTATTCCATTGTTGTAGGTGTCTAAAATTGAGCATCAATATTCTCAAAACCTT
AGGAGACGGTCGCCGTTATATGAAGACGTGGCCTATGGTTAGACAACTGGGTTTGTTTTTTCCTGAGTATCGGGTTGTGC
GTGCGACTCAGCTTGCCATTCTGGTGATGCCAGTGTTGGCGGTTTTTGCGAGTATGAGCCAGCTATATATCTATGGTTGG
GCATTTTTGCCACAAGCTGTCACTATCGCTTTATTTTTTATCAGCCTGCCAGTGCAGGGCTTATTGTGGCTAGGTTGGCG
GGCTCGCCATCCTTTACCTTTGTCGCTCTTCGACTGGAGTAACCAGTTAAGCGCGAAGCTGTCTTCCATGGGCATTCAGT
GCCAAACCTTAGGTGCTAAGGCTTGTTATCTCGATATGGCGGTTATTTTAAAAATAGCCTTTGAGCGCTTAGATGCCAGT
TATTGGGAAGAACTCTAG

Upstream 100 bases:

>100_bases
AGTTTATTAGACATGTGTAAACCTTTTGCCATTGTGTTTAATATAACGATTCAAAAACTATAGAACCACCGAGTATTTGC
CGTAACAGTCTTGGGGCAAA

Downstream 100 bases:

>100_bases
TTTTATATTTTGTCTTAATGTGTTTTTAATCGCTGCTTAGTCGACTAATAAACCGCATTTATGCCTTGCTGGACAAATAC
CGCTTTAATCTTTTCCATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MPNYAMVKTVFHCCRCLKLSINILKTLGDGRRYMKTWPMVRQLGLFFPEYRVVRATQLAILVMPVLAVFASMSQLYIYGW
AFLPQAVTIALFFISLPVQGLLWLGWRARHPLPLSLFDWSNQLSAKLSSMGIQCQTLGAKACYLDMAVILKIAFERLDAS
YWEEL

Sequences:

>Translated_165_residues
MPNYAMVKTVFHCCRCLKLSINILKTLGDGRRYMKTWPMVRQLGLFFPEYRVVRATQLAILVMPVLAVFASMSQLYIYGW
AFLPQAVTIALFFISLPVQGLLWLGWRARHPLPLSLFDWSNQLSAKLSSMGIQCQTLGAKACYLDMAVILKIAFERLDAS
YWEEL
>Mature_164_residues
PNYAMVKTVFHCCRCLKLSINILKTLGDGRRYMKTWPMVRQLGLFFPEYRVVRATQLAILVMPVLAVFASMSQLYIYGWA
FLPQAVTIALFFISLPVQGLLWLGWRARHPLPLSLFDWSNQLSAKLSSMGIQCQTLGAKACYLDMAVILKIAFERLDASY
WEEL

Specific function: Unknown

COG id: COG3092

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0208 family [H]

Homologues:

Organism=Escherichia coli, GI1788632, Length=146, Percent_Identity=38.3561643835616, Blast_Score=96, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007334 [H]

Pfam domain/function: PF04217 DUF412 [H]

EC number: NA

Molecular weight: Translated: 18917; Mature: 18786

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNYAMVKTVFHCCRCLKLSINILKTLGDGRRYMKTWPMVRQLGLFFPEYRVVRATQLAI
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LVMPVLAVFASMSQLYIYGWAFLPQAVTIALFFISLPVQGLLWLGWRARHPLPLSLFDWS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCEEHHCCC
NQLSAKLSSMGIQCQTLGAKACYLDMAVILKIAFERLDASYWEEL
HHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHCHHHHHCC
>Mature Secondary Structure 
PNYAMVKTVFHCCRCLKLSINILKTLGDGRRYMKTWPMVRQLGLFFPEYRVVRATQLAI
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LVMPVLAVFASMSQLYIYGWAFLPQAVTIALFFISLPVQGLLWLGWRARHPLPLSLFDWS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCEEHHCCC
NQLSAKLSSMGIQCQTLGAKACYLDMAVILKIAFERLDASYWEEL
HHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]