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The map label for this gene is scpA [H]

Identifier: 120598425

GI number: 120598425

Start: 1833405

End: 1834193

Strand: Direct

Name: scpA [H]

Synonym: Sputw3181_1608

Alternate gene names: 120598425

Gene position: 1833405-1834193 (Clockwise)

Preceding gene: 120598424

Following gene: 120598426

Centisome position: 38.94

GC content: 46.13

Gene sequence:

>789_bases
ATGCAGGGCACGCAACAGAGTTTACCCTTAGCCGTTATTCGTGGTCAGGCCATGACCGAAATGCCGCTGGATTTGTTTAT
TCCGCCGGAGGCATTGGAAGTGTTCCTTGAGTCCTTTGAAGGACCATTGGATTTACTTTTATATTTGATCCGTAAGCAAA
AATTAGACGTTGTCGATTTACCCATTCAGCAAATCACCGCGCAGTATTTAGAATATATTACGTTGCTGACTCAGGCTCGA
ATCGAACTTGCCGCCGATTATTTAGTGATGGCAGCAACGCTTGCCGAGATTAAATCCCGTTTGCTGCTGCCGCGTATGGT
GGCCGAAGATGAGGTTGAGGAAGATCCACGGGCACAGCTTATTCGGCAGCTTAAAGCCTATGAAGTGATTAAAGAAGCGT
CGCAAAAACTCGATGATTTACCGCGGCTCGAGCGGGATGTATTTCAAGCCAAAGCCGTGGCAGCACCCGGGATTAAGCCA
CTGGTGATCCCGCCAGAAGTTTCGTTGTTTGAAATTGCCCGCGCCTTTGGTGATGTACTCAAACGTATCGATGCCTATGA
AGATCATCATGTTAAGCGTGAACAGTTATCGACCCGTGAACGCATGAGCCAGATTTTAGCCATGTTGAACTCGGAAGATT
TTACGGCCTTTGAACGTTTATTTACCGTAGAAGAAGGCCGTGCTGGCGTGGTAGTCACCTTCTTAGCTTTGATGGAATTA
GTCAAAGAATTATTGGTCGAATTGTACCAAACAGAACCGTTTTCAACTATTTACGTTAAGGCCTATTAA

Upstream 100 bases:

>100_bases
CAACATTTGGCAGTTTTATCGCCGTAAATTTACAGGTATAATCGCGCGTTTGGCGTTAGCCTAGGTTGGATAGCGCAGTG
TTAACGGAGCAAGATAGCGG

Downstream 100 bases:

>100_bases
TTGATGCAGATAAATCCGACTCAATTAAAACAGCTTATTGAAGCGAGTTTGTTTGTATTGGGGAAACCCTTGTCGGCGAA
AATGTTGAAAGACACTGTCT

Product: chromosome segregation and condensation protein ScpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MQGTQQSLPLAVIRGQAMTEMPLDLFIPPEALEVFLESFEGPLDLLLYLIRKQKLDVVDLPIQQITAQYLEYITLLTQAR
IELAADYLVMAATLAEIKSRLLLPRMVAEDEVEEDPRAQLIRQLKAYEVIKEASQKLDDLPRLERDVFQAKAVAAPGIKP
LVIPPEVSLFEIARAFGDVLKRIDAYEDHHVKREQLSTRERMSQILAMLNSEDFTAFERLFTVEEGRAGVVVTFLALMEL
VKELLVELYQTEPFSTIYVKAY

Sequences:

>Translated_262_residues
MQGTQQSLPLAVIRGQAMTEMPLDLFIPPEALEVFLESFEGPLDLLLYLIRKQKLDVVDLPIQQITAQYLEYITLLTQAR
IELAADYLVMAATLAEIKSRLLLPRMVAEDEVEEDPRAQLIRQLKAYEVIKEASQKLDDLPRLERDVFQAKAVAAPGIKP
LVIPPEVSLFEIARAFGDVLKRIDAYEDHHVKREQLSTRERMSQILAMLNSEDFTAFERLFTVEEGRAGVVVTFLALMEL
VKELLVELYQTEPFSTIYVKAY
>Mature_262_residues
MQGTQQSLPLAVIRGQAMTEMPLDLFIPPEALEVFLESFEGPLDLLLYLIRKQKLDVVDLPIQQITAQYLEYITLLTQAR
IELAADYLVMAATLAEIKSRLLLPRMVAEDEVEEDPRAQLIRQLKAYEVIKEASQKLDDLPRLERDVFQAKAVAAPGIKP
LVIPPEVSLFEIARAFGDVLKRIDAYEDHHVKREQLSTRERMSQILAMLNSEDFTAFERLFTVEEGRAGVVVTFLALMEL
VKELLVELYQTEPFSTIYVKAY

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 29880; Mature: 29880

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGTQQSLPLAVIRGQAMTEMPLDLFIPPEALEVFLESFEGPLDLLLYLIRKQKLDVVDL
CCCCCHHCCHHHHCCCHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHC
PIQQITAQYLEYITLLTQARIELAADYLVMAATLAEIKSRLLLPRMVAEDEVEEDPRAQL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
IRQLKAYEVIKEASQKLDDLPRLERDVFQAKAVAAPGIKPLVIPPEVSLFEIARAFGDVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHH
KRIDAYEDHHVKREQLSTRERMSQILAMLNSEDFTAFERLFTVEEGRAGVVVTFLALMEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH
VKELLVELYQTEPFSTIYVKAY
HHHHHHHHHCCCCCCEEEEEEC
>Mature Secondary Structure
MQGTQQSLPLAVIRGQAMTEMPLDLFIPPEALEVFLESFEGPLDLLLYLIRKQKLDVVDL
CCCCCHHCCHHHHCCCHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHC
PIQQITAQYLEYITLLTQARIELAADYLVMAATLAEIKSRLLLPRMVAEDEVEEDPRAQL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
IRQLKAYEVIKEASQKLDDLPRLERDVFQAKAVAAPGIKPLVIPPEVSLFEIARAFGDVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHH
KRIDAYEDHHVKREQLSTRERMSQILAMLNSEDFTAFERLFTVEEGRAGVVVTFLALMEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH
VKELLVELYQTEPFSTIYVKAY
HHHHHHHHHCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]