Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is yaeQ [H]

Identifier: 120598348

GI number: 120598348

Start: 1736021

End: 1736566

Strand: Direct

Name: yaeQ [H]

Synonym: Sputw3181_1530

Alternate gene names: 120598348

Gene position: 1736021-1736566 (Clockwise)

Preceding gene: 120598347

Following gene: 120598366

Centisome position: 36.87

GC content: 43.22

Gene sequence:

>546_bases
ATGGCCCTCAAATCGACCGTATTTAAGGTCAACTTACAAATTGCCGATATGGATCGGAATTATTATCAAGATCACCAACT
GACTCTCGCACAGCATCCTTCTGAAACTGACGGGCGTATGATGGTACGTTTACTGGCTTTTATCATAAATGCCAGTGACA
CCTTAAGTTTTAGCAAAGGGCTTTGTGTTGATGATGAGCCAGAGCTATGGGATAAAAGCTTGTCTGGTGAGATCAATTTG
TGGGTTGAATTTGGTCAGGCAGATGAAAAGTGGCTGAGAAAGGCCAGTGGTCGTGCCAAAGCGGTGCAGCTCTTTACCTA
CGGTGGTCGCAGCGTGCCCATTTGGTGGAAACAAAATCAGCAAGCATTAGAACGCTATCAAAACTTGAAAGTATGGAATA
TTGCTGAAGACTCAGTGACTGCGATGGAAGCCTTAGTTGGGCGTAATATAGCCTTACAAGTTTCTATCAGTGAAGGGCAG
ATTTGGTTATCCGATAGTGAAAACAGTGTCCTCATTGAACCTGAAATCTTAAAAGATCATCAGTAA

Upstream 100 bases:

>100_bases
ATTTAATCGGATAGGTATTCGTTTGAGCAATGCCTTAGTCTCAGGTAGACTCGGCTCCTTTCATATGATTTTGAATTTCA
CTCTTTAATCGGGATAGGCT

Downstream 100 bases:

>100_bases
CGCTGCTAAAAAAGAGCCTGCAATTGCAGGCTCTTATCATTGATACCGATATGTGGTTAGTTAAAACTGAGCTCCCAGCT
ATCGATATAACCAACGTCAC

Product: YaeQ family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MALKSTVFKVNLQIADMDRNYYQDHQLTLAQHPSETDGRMMVRLLAFIINASDTLSFSKGLCVDDEPELWDKSLSGEINL
WVEFGQADEKWLRKASGRAKAVQLFTYGGRSVPIWWKQNQQALERYQNLKVWNIAEDSVTAMEALVGRNIALQVSISEGQ
IWLSDSENSVLIEPEILKDHQ

Sequences:

>Translated_181_residues
MALKSTVFKVNLQIADMDRNYYQDHQLTLAQHPSETDGRMMVRLLAFIINASDTLSFSKGLCVDDEPELWDKSLSGEINL
WVEFGQADEKWLRKASGRAKAVQLFTYGGRSVPIWWKQNQQALERYQNLKVWNIAEDSVTAMEALVGRNIALQVSISEGQ
IWLSDSENSVLIEPEILKDHQ
>Mature_180_residues
ALKSTVFKVNLQIADMDRNYYQDHQLTLAQHPSETDGRMMVRLLAFIINASDTLSFSKGLCVDDEPELWDKSLSGEINLW
VEFGQADEKWLRKASGRAKAVQLFTYGGRSVPIWWKQNQQALERYQNLKVWNIAEDSVTAMEALVGRNIALQVSISEGQI
WLSDSENSVLIEPEILKDHQ

Specific function: Unknown

COG id: COG4681

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786388, Length=170, Percent_Identity=45.8823529411765, Blast_Score=171, Evalue=4e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009822 [H]

Pfam domain/function: PF07152 YaeQ [H]

EC number: NA

Molecular weight: Translated: 20672; Mature: 20540

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALKSTVFKVNLQIADMDRNYYQDHQLTLAQHPSETDGRMMVRLLAFIINASDTLSFSKG
CCCCCEEEEEEEEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
LCVDDEPELWDKSLSGEINLWVEFGQADEKWLRKASGRAKAVQLFTYGGRSVPIWWKQNQ
CCCCCCHHHHHHCCCCEEEEEEEECCCHHHHHHHHCCCCEEEEEEEECCCEEEEEECCCH
QALERYQNLKVWNIAEDSVTAMEALVGRNIALQVSISEGQIWLSDSENSVLIEPEILKDH
HHHHHHHCCEEEEECCHHHHHHHHHHCCCEEEEEEECCCEEEEECCCCEEEECHHHCCCC
Q
C
>Mature Secondary Structure 
ALKSTVFKVNLQIADMDRNYYQDHQLTLAQHPSETDGRMMVRLLAFIINASDTLSFSKG
CCCCEEEEEEEEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
LCVDDEPELWDKSLSGEINLWVEFGQADEKWLRKASGRAKAVQLFTYGGRSVPIWWKQNQ
CCCCCCHHHHHHCCCCEEEEEEEECCCHHHHHHHHCCCCEEEEEEEECCCEEEEEECCCH
QALERYQNLKVWNIAEDSVTAMEALVGRNIALQVSISEGQIWLSDSENSVLIEPEILKDH
HHHHHHHCCEEEEECCHHHHHHHHHHCCCEEEEEEECCCEEEEECCCCEEEECHHHCCCC
Q
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]