| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is ylxH [H]
Identifier: 120598266
GI number: 120598266
Start: 1630236
End: 1631117
Strand: Direct
Name: ylxH [H]
Synonym: Sputw3181_1443
Alternate gene names: 120598266
Gene position: 1630236-1631117 (Clockwise)
Preceding gene: 120598265
Following gene: 120598267
Centisome position: 34.62
GC content: 45.35
Gene sequence:
>882_bases ATGACCCTGGATCAAGCAAGTGGTTTACGTATGATGAATCAACCCTATAACGAAAAAGTGAAAGTAATCGCTGTCACAGG TGGTAAAGGTGGCGTGGGTAAAACCAGCGTATCAATTAATACCGCAGTGGCATTAGCCGAAAAGGGCAAGCGTGTCTTAG TGCTTGACGCAGACCTTGGCTTAGCCAATGTCGATGTCATGTTGGGGATCCGTGCCGAGCGTAACCTCTCCCATGTATTA TCGGGTGATGCTGAACTTGACGATATTATTGTCCGTGGGCCTAAAGGTATTGGTATCGTACCAGCGACTTCAGGCACCCA AGGTATGGTGGAACTAAGTCCTGCTCAGCATGCTGGATTAATCCGTGCTTTCAGTGAGATGCGCGCACAATTTGATATTC TTGTGGTCGATACTGCTGCAGGGATTTCCGATATGGTACTCAGTTTCTCACGTGCTTCGCAGGATGTGCTAGTCGTTGTA TGTGACGAGCCTACCTCAATCACCGACGCCTATGCGTTAATTAAAATTCTCAGCCGTGAACACGGTGTATTTCGTTTTAA AATTGTTGCCAATATGGTGCGTAGTTTACGCGAAGGGATGGAATTATTTGCTAAACTCAGTAAAGTGACCGACCGATTTT TAGATGTGGCACTTGAGCTCGTTGCAACGATTCCATTTGATGAAAATTTGCGTAAGTCTGTGCGTAAGCAAAAGTTAGTG GTTGAAGCTTATCCTAAATCACCTGCAGCGATCGCATACCAAGGCTTAGCCAATAAAATCATGAGTTGGCCTGTACCGCA ACAACCTGGTGGGCATTTGGAGTTTTTCGTTGAACGTTTAGTCCAACGACCAGATTTTCAAGAGGAAAAAACGAGTGAAT AA
Upstream 100 bases:
>100_bases TTAGCGCAGCAGGCGCTTGCGACATTAGATAGTACAGAACAACAATCATTACAAGACACAGCGTGGTCAGATAATATGGC CTGTGCATTTGAGTAGAGTT
Downstream 100 bases:
>100_bases AGCCGCAGCGTATACTTGTTTAGACAATAAATCGTCTATCGTTGAACAGTATGCTCCGTTGGTTAAAAGAATTGCACATC ATTTACTCGCCAGACTGCCA
Product: cobyrinic acid a,c-diamide synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MTLDQASGLRMMNQPYNEKVKVIAVTGGKGGVGKTSVSINTAVALAEKGKRVLVLDADLGLANVDVMLGIRAERNLSHVL SGDAELDDIIVRGPKGIGIVPATSGTQGMVELSPAQHAGLIRAFSEMRAQFDILVVDTAAGISDMVLSFSRASQDVLVVV CDEPTSITDAYALIKILSREHGVFRFKIVANMVRSLREGMELFAKLSKVTDRFLDVALELVATIPFDENLRKSVRKQKLV VEAYPKSPAAIAYQGLANKIMSWPVPQQPGGHLEFFVERLVQRPDFQEEKTSE
Sequences:
>Translated_293_residues MTLDQASGLRMMNQPYNEKVKVIAVTGGKGGVGKTSVSINTAVALAEKGKRVLVLDADLGLANVDVMLGIRAERNLSHVL SGDAELDDIIVRGPKGIGIVPATSGTQGMVELSPAQHAGLIRAFSEMRAQFDILVVDTAAGISDMVLSFSRASQDVLVVV CDEPTSITDAYALIKILSREHGVFRFKIVANMVRSLREGMELFAKLSKVTDRFLDVALELVATIPFDENLRKSVRKQKLV VEAYPKSPAAIAYQGLANKIMSWPVPQQPGGHLEFFVERLVQRPDFQEEKTSE >Mature_292_residues TLDQASGLRMMNQPYNEKVKVIAVTGGKGGVGKTSVSINTAVALAEKGKRVLVLDADLGLANVDVMLGIRAERNLSHVLS GDAELDDIIVRGPKGIGIVPATSGTQGMVELSPAQHAGLIRAFSEMRAQFDILVVDTAAGISDMVLSFSRASQDVLVVVC DEPTSITDAYALIKILSREHGVFRFKIVANMVRSLREGMELFAKLSKVTDRFLDVALELVATIPFDENLRKSVRKQKLVV EAYPKSPAAIAYQGLANKIMSWPVPQQPGGHLEFFVERLVQRPDFQEEKTSE
Specific function: ATPase Required For The Correct Placement Of The Division Site. Cell Division Inhibitors Minc And Mind Act In Concert To Form An Inhibitor Capable Of Blocking Formation Of The Polar Z Ring Septums. Rapidly Oscillates Between The Poles Of The Cell To Dest
COG id: COG0455
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787423, Length=163, Percent_Identity=31.9018404907975, Blast_Score=77, Evalue=9e-16, Organism=Escherichia coli, GI87082045, Length=267, Percent_Identity=26.2172284644195, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: 300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 31847; Mature: 31716
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLDQASGLRMMNQPYNEKVKVIAVTGGKGGVGKTSVSINTAVALAEKGKRVLVLDADLG CCCCCCCCCHHHCCCCCCCEEEEEEECCCCCCCCEEEEHHHHHHHHHCCCEEEEEECCCC LANVDVMLGIRAERNLSHVLSGDAELDDIIVRGPKGIGIVPATSGTQGMVELSPAQHAGL EECEEEEEEECCCCCHHHHHCCCCCCCCEEEECCCCCEEEECCCCCCCEEEECCHHHHHH IRAFSEMRAQFDILVVDTAAGISDMVLSFSRASQDVLVVVCDEPTSITDAYALIKILSRE HHHHHHHHHHEEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCC HGVFRFKIVANMVRSLREGMELFAKLSKVTDRFLDVALELVATIPFDENLRKSVRKQKLV CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEE VEAYPKSPAAIAYQGLANKIMSWPVPQQPGGHLEFFVERLVQRPDFQEEKTSE EEECCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TLDQASGLRMMNQPYNEKVKVIAVTGGKGGVGKTSVSINTAVALAEKGKRVLVLDADLG CCCCCCCCHHHCCCCCCCEEEEEEECCCCCCCCEEEEHHHHHHHHHCCCEEEEEECCCC LANVDVMLGIRAERNLSHVLSGDAELDDIIVRGPKGIGIVPATSGTQGMVELSPAQHAGL EECEEEEEEECCCCCHHHHHCCCCCCCCEEEECCCCCEEEECCCCCCCEEEECCHHHHHH IRAFSEMRAQFDILVVDTAAGISDMVLSFSRASQDVLVVVCDEPTSITDAYALIKILSRE HHHHHHHHHHEEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCC HGVFRFKIVANMVRSLREGMELFAKLSKVTDRFLDVALELVATIPFDENLRKSVRKQKLV CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEE VEAYPKSPAAIAYQGLANKIMSWPVPQQPGGHLEFFVERLVQRPDFQEEKTSE EEECCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7987014; 9384377 [H]