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The map label for this gene is fliD [H]

Identifier: 120598243

GI number: 120598243

Start: 1607097

End: 1608467

Strand: Direct

Name: fliD [H]

Synonym: Sputw3181_1420

Alternate gene names: 120598243

Gene position: 1607097-1608467 (Clockwise)

Preceding gene: 120598242

Following gene: 120598244

Centisome position: 34.13

GC content: 39.31

Gene sequence:

>1371_bases
ATGGCATTAACAGCGACAGGTATCGGCTCAGGCTTAGATATTGCTAACATTGTAAAAGTGTTAGTGGATGCCGAAAAAAC
ACCGAAAGAGGCAATGTTTAATAAAACAGAAGACAGCATTAAAGCTAAGGTTTCTGCTATGGGAACCTTAAAAAGCGCAC
TGACGACATTTCAGGATGCCGTAAAAAAATTACAAACCGGTGAGGCTTTAAATCAACGCAAAATATCCGTTAGTAATAGT
ACATATTTAACTGCAACTGCTGATAAAACAGCTCAAACAGGTAGTTATGCTATTAAAGTTGAACAGCTCGCTGTCAACCA
TAAGATTGCAGGAGCAAATGTTGCGAATCCTGCATCTGGTGTTGGTGAAGGAAGCCTAGATTTTGACATCAATGGAAAAA
ATTTCTCTGTTGATATAGCCGCAACAGATTCCCTTGATGCAATAGCCAAAAAAGTCAATAAAGCTTCTGACAATGTGGGT
GTTACCGCAACCGTAGTTACCAGTGATGCTGGTAGTCGATTGGTGTTTAGTTCCAATAAAACGGGTGAGGATAATCAAAT
CAATATTACTGCGACTGACACTTCAGGCTCAGGGCTCAGTGATATGTTTGATGCCAGTAATATTACAACATTACAAGATG
CCAAAAATGCAGTGATCTATATTGATAACCAAAAAGTCACCTCGCAAACTAATGAAGTTAAGAATGCGATTACAGGTGTG
ACTTTACAGTTAACAGATGCTGATCTTACTAAAACCACTTCACTCAAAATAGAACAAGATAACGATGCAGTTAAAACAAA
CGTTAAGGCATTTGTTGATGCCTACAATAGCTTAGTTACAACGGTCGATAAGCTGTCATCCTACGATCAAGATACAAATA
CTGCAGCGGCATTGCAGGGCGACTCGATGATCCGTTCGATTGAATCACAACTCCGTAGTATTGCGAGCGAACGAGTGCCT
ACCGAAGATGGTGGTTCTATAGCTTTGTATGATATAGGTATCACAACAGATAGATATGGTAAGTTATCTATTGATGATAC
TAAGCTTGATAAAGTGCTTTCTGAGGATATGTCTAGTGTTGAAGCTCTCTTTGCTACACCAGAAAAAGGCTTAGCTAATC
GGTTTTACGATGTTTCTGAAAGCTATGTTAAATCCCGAGGCGTGATTGCAGATAGAGAGACAAGTTATACTAATCAGCAA
AGTAGGTTAGCAGATCAAAGAGAAGCCTTTACCCTTAAAATGGATCAGTTAACTGCACGTTTAACAAAGCAGTTTAATGC
GATGGATCTTGTCGTAGGACAACTTAACCAGCAGAGTAGTGGTTTACTTGCTAGTTTAAACTCGCTTCCTGGAGCAGTTA
AAAAGAGTTAG

Upstream 100 bases:

>100_bases
GCTGAAAAGCTATCTGAAGTGACAGGGCTTTTGATGAAAACAGAGGCTTAAAATACTGACATTACTAAATATAGTGATAG
TTGATGAGTAAGAGGTTTGT

Downstream 100 bases:

>100_bases
TAAGTAAGGAAACGTCTAGTGAAACAACTTAATGAACTTAATGAACTTAATATAACGCTCAGCGACACATTGAATCAGTT
AACTCGCATCCCCGCAGAAT

Product: flagellar hook-associated 2 domain-containing protein

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 456; Mature: 455

Protein sequence:

>456_residues
MALTATGIGSGLDIANIVKVLVDAEKTPKEAMFNKTEDSIKAKVSAMGTLKSALTTFQDAVKKLQTGEALNQRKISVSNS
TYLTATADKTAQTGSYAIKVEQLAVNHKIAGANVANPASGVGEGSLDFDINGKNFSVDIAATDSLDAIAKKVNKASDNVG
VTATVVTSDAGSRLVFSSNKTGEDNQINITATDTSGSGLSDMFDASNITTLQDAKNAVIYIDNQKVTSQTNEVKNAITGV
TLQLTDADLTKTTSLKIEQDNDAVKTNVKAFVDAYNSLVTTVDKLSSYDQDTNTAAALQGDSMIRSIESQLRSIASERVP
TEDGGSIALYDIGITTDRYGKLSIDDTKLDKVLSEDMSSVEALFATPEKGLANRFYDVSESYVKSRGVIADRETSYTNQQ
SRLADQREAFTLKMDQLTARLTKQFNAMDLVVGQLNQQSSGLLASLNSLPGAVKKS

Sequences:

>Translated_456_residues
MALTATGIGSGLDIANIVKVLVDAEKTPKEAMFNKTEDSIKAKVSAMGTLKSALTTFQDAVKKLQTGEALNQRKISVSNS
TYLTATADKTAQTGSYAIKVEQLAVNHKIAGANVANPASGVGEGSLDFDINGKNFSVDIAATDSLDAIAKKVNKASDNVG
VTATVVTSDAGSRLVFSSNKTGEDNQINITATDTSGSGLSDMFDASNITTLQDAKNAVIYIDNQKVTSQTNEVKNAITGV
TLQLTDADLTKTTSLKIEQDNDAVKTNVKAFVDAYNSLVTTVDKLSSYDQDTNTAAALQGDSMIRSIESQLRSIASERVP
TEDGGSIALYDIGITTDRYGKLSIDDTKLDKVLSEDMSSVEALFATPEKGLANRFYDVSESYVKSRGVIADRETSYTNQQ
SRLADQREAFTLKMDQLTARLTKQFNAMDLVVGQLNQQSSGLLASLNSLPGAVKKS
>Mature_455_residues
ALTATGIGSGLDIANIVKVLVDAEKTPKEAMFNKTEDSIKAKVSAMGTLKSALTTFQDAVKKLQTGEALNQRKISVSNST
YLTATADKTAQTGSYAIKVEQLAVNHKIAGANVANPASGVGEGSLDFDINGKNFSVDIAATDSLDAIAKKVNKASDNVGV
TATVVTSDAGSRLVFSSNKTGEDNQINITATDTSGSGLSDMFDASNITTLQDAKNAVIYIDNQKVTSQTNEVKNAITGVT
LQLTDADLTKTTSLKIEQDNDAVKTNVKAFVDAYNSLVTTVDKLSSYDQDTNTAAALQGDSMIRSIESQLRSIASERVPT
EDGGSIALYDIGITTDRYGKLSIDDTKLDKVLSEDMSSVEALFATPEKGLANRFYDVSESYVKSRGVIADRETSYTNQQS
RLADQREAFTLKMDQLTARLTKQFNAMDLVVGQLNQQSSGLLASLNSLPGAVKKS

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

Organism=Escherichia coli, GI1788233, Length=462, Percent_Identity=31.1688311688312, Blast_Score=139, Evalue=3e-34,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 48477; Mature: 48346

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALTATGIGSGLDIANIVKVLVDAEKTPKEAMFNKTEDSIKAKVSAMGTLKSALTTFQDA
CEEEECCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
VKKLQTGEALNQRKISVSNSTYLTATADKTAQTGSYAIKVEQLAVNHKIAGANVANPASG
HHHHHCCCCCCCCEEEECCCEEEEEECCCCCCCCCEEEEEEEEEECCEECCCCCCCCCCC
VGEGSLDFDINGKNFSVDIAATDSLDAIAKKVNKASDNVGVTATVVTSDAGSRLVFSSNK
CCCCCEEEEECCCEEEEEEEECCCHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEECCC
TGEDNQINITATDTSGSGLSDMFDASNITTLQDAKNAVIYIDNQKVTSQTNEVKNAITGV
CCCCCEEEEEEECCCCCCCHHHHCCCCCEEECCCCCEEEEECCCCHHHHHHHHHHHHCCE
TLQLTDADLTKTTSLKIEQDNDAVKTNVKAFVDAYNSLVTTVDKLSSYDQDTNTAAALQG
EEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC
DSMIRSIESQLRSIASERVPTEDGGSIALYDIGITTDRYGKLSIDDTKLDKVLSEDMSSV
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEECCHHHHHHHHHHHHHHH
EALFATPEKGLANRFYDVSESYVKSRGVIADRETSYTNQQSRLADQREAFTLKMDQLTAR
HHHHCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHEEEHHHHHHH
LTKQFNAMDLVVGQLNQQSSGLLASLNSLPGAVKKS
HHHHCCHHHHHHHHCCCCCCCHHHHHHHCCCCCCCC
>Mature Secondary Structure 
ALTATGIGSGLDIANIVKVLVDAEKTPKEAMFNKTEDSIKAKVSAMGTLKSALTTFQDA
EEEECCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
VKKLQTGEALNQRKISVSNSTYLTATADKTAQTGSYAIKVEQLAVNHKIAGANVANPASG
HHHHHCCCCCCCCEEEECCCEEEEEECCCCCCCCCEEEEEEEEEECCEECCCCCCCCCCC
VGEGSLDFDINGKNFSVDIAATDSLDAIAKKVNKASDNVGVTATVVTSDAGSRLVFSSNK
CCCCCEEEEECCCEEEEEEEECCCHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEECCC
TGEDNQINITATDTSGSGLSDMFDASNITTLQDAKNAVIYIDNQKVTSQTNEVKNAITGV
CCCCCEEEEEEECCCCCCCHHHHCCCCCEEECCCCCEEEEECCCCHHHHHHHHHHHHCCE
TLQLTDADLTKTTSLKIEQDNDAVKTNVKAFVDAYNSLVTTVDKLSSYDQDTNTAAALQG
EEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC
DSMIRSIESQLRSIASERVPTEDGGSIALYDIGITTDRYGKLSIDDTKLDKVLSEDMSSV
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEECCHHHHHHHHHHHHHHH
EALFATPEKGLANRFYDVSESYVKSRGVIADRETSYTNQQSRLADQREAFTLKMDQLTAR
HHHHCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHEEEHHHHHHH
LTKQFNAMDLVVGQLNQQSSGLLASLNSLPGAVKKS
HHHHCCHHHHHHHHCCCCCCCHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9488388; 10678962 [H]