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The map label for this gene is flgF

Identifier: 120598233

GI number: 120598233

Start: 1596815

End: 1597558

Strand: Direct

Name: flgF

Synonym: Sputw3181_1410

Alternate gene names: 120598233

Gene position: 1596815-1597558 (Clockwise)

Preceding gene: 120598232

Following gene: 120598234

Centisome position: 33.91

GC content: 47.31

Gene sequence:

>744_bases
GTGGACAAATTCCTGTATATCTCCATGAGTGGGGCTAAGCAAAATATGAATGAGTTGGCCTTACGAGGCAACAACTTAGC
CAATGCGAATACTGACGGCTTCAAGTCTGATATGGCGCAGGCAAGATCAATGCAAGCCTTTGGAGAAGGATTACCAACAC
GGGTGTTTGCCATGATCGAAACTCCGTCTGCTAATTTTCGTTCAGGCCCAATTAAGACGACAGGACGAGATCTTGACGTT
GCCATTAAGGGCGATGGTTGGTTTGCTGTGCAGGCAAAAGATGGGGCAGAGGCTTATACCCGCTCTGGCAGCTTGAGTTT
TGATGCGACAGGTCTCTTGCATAACGACCGAGGTAATCCGGTGATGGGAGATGCCGGGCCAATTGTACTGCCGTTACCCA
TAGATAAAGTGACTATTTCCCAGGATGGGATTATTTCTGTTCGTCCTCAAGGTGCTACCGCAGAGGTTATCGAAGAGGTT
GGCAGACTTAAACTGGTCAATCCTGGTAATGCCCAGATGATGCGTGGCGAAGATGGTTTATTCAGACTTGTGTCAGGTAA
CGATGCTCCAGCAGACCCTAATGTCGCCGTGGAAAGTGGTGCAGTAGAAGGCAGTAACGTCAATCCAGTCGATGAGATGG
TGTCTTTGATCGAATTACAACGTCAGTTTGAAATGCAAGTCAAGATGATGAAAACCGCGGAAGAAATTGACCGTGCTTCA
TCTTCATTAATGCGTATTAGTTAG

Upstream 100 bases:

>100_bases
CCTTCTAATTTTTCTAATTAATCAACATATTAGGTATCGTTTTTGTTGGCACGATGCTTGCTTTGCTATTGTCAGGTAGA
AAATTTGACGGAGCAGTCTT

Downstream 100 bases:

>100_bases
GAGATAGATTATGCATCCGGCGTTATGGATTAGTAAAACTGGCTTAGACGCGCAGCAAACAGATATTGCGGTGATCTCAA
ACAACGTTGCCAACGCCAGT

Product: flagellar basal body rod protein FlgF

Products: NA

Alternate protein names: Putative proximal rod protein [H]

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MDKFLYISMSGAKQNMNELALRGNNLANANTDGFKSDMAQARSMQAFGEGLPTRVFAMIETPSANFRSGPIKTTGRDLDV
AIKGDGWFAVQAKDGAEAYTRSGSLSFDATGLLHNDRGNPVMGDAGPIVLPLPIDKVTISQDGIISVRPQGATAEVIEEV
GRLKLVNPGNAQMMRGEDGLFRLVSGNDAPADPNVAVESGAVEGSNVNPVDEMVSLIELQRQFEMQVKMMKTAEEIDRAS
SSLMRIS

Sequences:

>Translated_247_residues
MDKFLYISMSGAKQNMNELALRGNNLANANTDGFKSDMAQARSMQAFGEGLPTRVFAMIETPSANFRSGPIKTTGRDLDV
AIKGDGWFAVQAKDGAEAYTRSGSLSFDATGLLHNDRGNPVMGDAGPIVLPLPIDKVTISQDGIISVRPQGATAEVIEEV
GRLKLVNPGNAQMMRGEDGLFRLVSGNDAPADPNVAVESGAVEGSNVNPVDEMVSLIELQRQFEMQVKMMKTAEEIDRAS
SSLMRIS
>Mature_247_residues
MDKFLYISMSGAKQNMNELALRGNNLANANTDGFKSDMAQARSMQAFGEGLPTRVFAMIETPSANFRSGPIKTTGRDLDV
AIKGDGWFAVQAKDGAEAYTRSGSLSFDATGLLHNDRGNPVMGDAGPIVLPLPIDKVTISQDGIISVRPQGATAEVIEEV
GRLKLVNPGNAQMMRGEDGLFRLVSGNDAPADPNVAVESGAVEGSNVNPVDEMVSLIELQRQFEMQVKMMKTAEEIDRAS
SSLMRIS

Specific function: Unknown

COG id: COG4787

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787317, Length=253, Percent_Identity=41.501976284585, Blast_Score=189, Evalue=2e-49,
Organism=Escherichia coli, GI1787318, Length=261, Percent_Identity=31.8007662835249, Blast_Score=91, Evalue=5e-20,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013
- InterPro:   IPR012836 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 26453; Mature: 26453

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKFLYISMSGAKQNMNELALRGNNLANANTDGFKSDMAQARSMQAFGEGLPTRVFAMIE
CCCEEEEEECCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEE
TPSANFRSGPIKTTGRDLDVAIKGDGWFAVQAKDGAEAYTRSGSLSFDATGLLHNDRGNP
CCCCCCCCCCCEECCCCEEEEEECCCEEEEEECCCCHHHHCCCCCCCCEEEEEECCCCCC
VMGDAGPIVLPLPIDKVTISQDGIISVRPQGATAEVIEEVGRLKLVNPGNAQMMRGEDGL
CCCCCCCEEEECCCCEEEECCCCEEEECCCCCHHHHHHHHCCEEEECCCCCEEEECCCCE
FRLVSGNDAPADPNVAVESGAVEGSNVNPVDEMVSLIELQRQFEMQVKMMKTAEEIDRAS
EEEEECCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSLMRIS
HHHEECC
>Mature Secondary Structure
MDKFLYISMSGAKQNMNELALRGNNLANANTDGFKSDMAQARSMQAFGEGLPTRVFAMIE
CCCEEEEEECCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEE
TPSANFRSGPIKTTGRDLDVAIKGDGWFAVQAKDGAEAYTRSGSLSFDATGLLHNDRGNP
CCCCCCCCCCCEECCCCEEEEEECCCEEEEEECCCCHHHHCCCCCCCCEEEEEECCCCCC
VMGDAGPIVLPLPIDKVTISQDGIISVRPQGATAEVIEEVGRLKLVNPGNAQMMRGEDGL
CCCCCCCEEEECCCCEEEECCCCEEEECCCCCHHHHHHHHCCEEEECCCCCEEEECCCCE
FRLVSGNDAPADPNVAVESGAVEGSNVNPVDEMVSLIELQRQFEMQVKMMKTAEEIDRAS
EEEEECCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSLMRIS
HHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]