| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is thrA
Identifier: 120598100
GI number: 120598100
Start: 1455045
End: 1457513
Strand: Direct
Name: thrA
Synonym: Sputw3181_1277
Alternate gene names: 120598100
Gene position: 1455045-1457513 (Clockwise)
Preceding gene: 120598098
Following gene: 120598101
Centisome position: 30.9
GC content: 49.25
Gene sequence:
>2469_bases ATGAAAGTAATGAAATTTGGTGGTACCTCGCTTGCAAATTGGCAGCGATTCTCGATGGCGGCGGATATCGTTGCTAAGTC ATCTAAGCTTGAGCCAATAGCCACAGTGCTATCGGCCCCGGCGACTGTGACAAATGCGTTACTAGAAATGGTTGATGTAG CCGTTAAAGGTGAAGATTATTCGTCTGTGCTGCAGCATGTTGAGCGGGTATTTACCTCGCTATACCAAGATGCTGTTACT TCAATGTTGTCGAGTGAGCAGAGTGAACAGCTCTTTTCTGGACTTAATGCGCAGCTGGTGATTTGGCAGGATAGATTACG TGGCATTAGCTTACTGCAAGAGTGTCCCGATGGCATACGTGCTGAAATCGTGGTGGCAGGTGAGCGTTTATCTGCAGCCT TGATGGAACAAGTGATGCTATCTAAGGGGATCACGTCTGCTCAACTCGATCCGCGCGCCTTGTTTCTAGGTCGAGGTCGG CCGTTAGAATCCGTGGTCGATATCGCTATAAGTAAGCCAAGGTTTCGCGCGTTGGCGCTGGGTGAAAAGCGCGTATGGGT AATGCCGGGTTTCACCGCCGCCGATGAACAGGGCAAAGTGGTGACGTTAGGCCGTAATGGTTCGGACTATTCTGCTGCCG TGCTGGCCGCCTGTTTAGATGCTTCAAGTTGTGAAATCTGGACCGATGTTGACGGTGTTTATAATACCGATCCCCGGGTG GTTGCCGATGCCAAGTTGTTGTCACAACTCAGTTATCAAGAGGCGATGGAACTCTCCTATTTTGGCGCTAAAGTGCTGCA TCCTAAGACGATTGCGCCCATCGCTCAGTTCCATATTCCCTGTTATATCAAAAATAGTTTTAACCCCGATGCGCCCGGCA CTCTGGTATCAAACCAAGCCGATGAAACTGGCTTGCAGGTTAAAGCTATCTCCAATTTAGATAACCAGACCATGTTCGAT ATATCAGGCCCAGGCATGAAAGGCATGGTTGGCATGGCGAGCCGTACTCTCGCGGCGATTTCCCGCAGCGGCGTGTCAGT CTCTTTAATCACCCAAAGCTCCTCTGAATACAGTATTAGCTTCTGTGTGGCGACGTCTGACTCGGCCAAAGTGAAATGGG CCTTAGAGCAAGAGTTTGAATTAGAAATAAAAAGTGACTTGCTTGAACCTATTGCTATGCGTCATGAGCTGGCAATTGTG TCTTTGATTGGTGATGGCATGCGCACCCACAAAGGCGTGGCAGCGCGTTTCTTCCAAGCGTTAGCGCAGGCGAGCGTGAA CATTATCGCCATAGCCCAAGGTTCGTCCGAGCGCTCGATTTCGACTGTGATCGAGCAGCGTAAGACTAAGCATGCGGTGG CGGCTTGTCATCAAGGCTTTTTCGATGTGCAGCAGTATTTAGATGTGTTTTTAGTGGGTTGCGGCAATGTGGGGGCTGGC CTGCTTGAGCAGATAAAACAACAGTCCGCCATGCTTAAAGAGCAGCACATCAGTATCCGTGTTTGCGGTATAGTGAATTC GAACAAGATGTTACTCGACAGTGCGGGCATCGATTTAAGCAATTGGTCTAGCTTGCTTGCCGATAGCCAGCAAGCTTGCG ATATCCCAGCATTACTCGCATGGGCGAAAGAGCAACAATTGCTTAATCCAGTGCTGGTGGATTGCACTTCGAGCGAGCAA GTATCGGATCTGTATTTGGATGTGATGAACTCAGGTTTGCATGTGGTCACGCCGAACAAAAAGTCGAACACTCGCGATTA TGCTTATTATCAAGCACTGCGCCAAACGGCATTAAAACAGCGTCGCCAATTCTTATACGAAACCACAGTCGGTGCGGGTT TACCTGTGATCGATAACCTGAAAAAACTGTTATTTGCGGGTGACAAACTGCATAAATTTAACGGTATTTTATCGGGCTCT TTATCCTTTATCTTCGGCATGCTCGATGAAGGTATGACGCTTTCTGAAGCGACTGGTCTGGCGCGAGAAAAATGTTTTAC TGAGCCCGATCCCCGTGATGATTTGAGTGGTATGGATGTGGCGCGTAAGGTGCTCATTCTTGCCCGTGAAGTGGGACTAA AGTTAGAGCTCAGTGACGTGCAGGTTGAATCTGTATTGCCAGCCGAGTTTGATGATTCAGGTGATGTTGAAAGCTTTATG GCACGATTACCGCAAGTAGATGCTGCAATTGCCGCAAAAGTGGCGCAGGCCAAAGCCCAAGGTAAAGTGCTGCGTTATGT TGGGCAAATTGAGGATGGTGTGTGCCGTGTGCGTATCGCCGAAGTGGATGCACAGGATCCGCTTTATAGCGTTAAAGGCG GTGAAAATGCCTTGGCGTTCTATAGCCGCTATTATCAGCCCATTCCCTTTGTGCTACGCGGCTATGGCGCAGGGACTGAA GTGACCGCTGCTGGCGCCTTTGCCGATGTATTAAGAACCTTGAATTGGACTCGTGAGGTGAGTGTATGA
Upstream 100 bases:
>100_bases ACCCTAAAGAATTTTAACGATGAGCCCGCTTCCCACAAAGAAGCGGGCTTTTTTGTTTCTAGCTCTTATTTCTAAGTCGG GCGCGGTACAGGAGAACAAG
Downstream 100 bases:
>100_bases GTTTGACTGTTTACGCTCCAGCCTCTATGGGTAACGTGGGCGTCGGATTTGATTTACTCGGTGCTGCATTAGCGCCGATT GATGGTAGTTTACTGGGCGA
Product: bifunctional aspartokinase I/homoserine dehydrogenase I
Products: NA
Alternate protein names: Aspartokinase I/homoserine dehydrogenase I; AKI-HDI; Aspartokinase; Homoserine dehydrogenase [H]
Number of amino acids: Translated: 822; Mature: 822
Protein sequence:
>822_residues MKVMKFGGTSLANWQRFSMAADIVAKSSKLEPIATVLSAPATVTNALLEMVDVAVKGEDYSSVLQHVERVFTSLYQDAVT SMLSSEQSEQLFSGLNAQLVIWQDRLRGISLLQECPDGIRAEIVVAGERLSAALMEQVMLSKGITSAQLDPRALFLGRGR PLESVVDIAISKPRFRALALGEKRVWVMPGFTAADEQGKVVTLGRNGSDYSAAVLAACLDASSCEIWTDVDGVYNTDPRV VADAKLLSQLSYQEAMELSYFGAKVLHPKTIAPIAQFHIPCYIKNSFNPDAPGTLVSNQADETGLQVKAISNLDNQTMFD ISGPGMKGMVGMASRTLAAISRSGVSVSLITQSSSEYSISFCVATSDSAKVKWALEQEFELEIKSDLLEPIAMRHELAIV SLIGDGMRTHKGVAARFFQALAQASVNIIAIAQGSSERSISTVIEQRKTKHAVAACHQGFFDVQQYLDVFLVGCGNVGAG LLEQIKQQSAMLKEQHISIRVCGIVNSNKMLLDSAGIDLSNWSSLLADSQQACDIPALLAWAKEQQLLNPVLVDCTSSEQ VSDLYLDVMNSGLHVVTPNKKSNTRDYAYYQALRQTALKQRRQFLYETTVGAGLPVIDNLKKLLFAGDKLHKFNGILSGS LSFIFGMLDEGMTLSEATGLAREKCFTEPDPRDDLSGMDVARKVLILAREVGLKLELSDVQVESVLPAEFDDSGDVESFM ARLPQVDAAIAAKVAQAKAQGKVLRYVGQIEDGVCRVRIAEVDAQDPLYSVKGGENALAFYSRYYQPIPFVLRGYGAGTE VTAAGAFADVLRTLNWTREVSV
Sequences:
>Translated_822_residues MKVMKFGGTSLANWQRFSMAADIVAKSSKLEPIATVLSAPATVTNALLEMVDVAVKGEDYSSVLQHVERVFTSLYQDAVT SMLSSEQSEQLFSGLNAQLVIWQDRLRGISLLQECPDGIRAEIVVAGERLSAALMEQVMLSKGITSAQLDPRALFLGRGR PLESVVDIAISKPRFRALALGEKRVWVMPGFTAADEQGKVVTLGRNGSDYSAAVLAACLDASSCEIWTDVDGVYNTDPRV VADAKLLSQLSYQEAMELSYFGAKVLHPKTIAPIAQFHIPCYIKNSFNPDAPGTLVSNQADETGLQVKAISNLDNQTMFD ISGPGMKGMVGMASRTLAAISRSGVSVSLITQSSSEYSISFCVATSDSAKVKWALEQEFELEIKSDLLEPIAMRHELAIV SLIGDGMRTHKGVAARFFQALAQASVNIIAIAQGSSERSISTVIEQRKTKHAVAACHQGFFDVQQYLDVFLVGCGNVGAG LLEQIKQQSAMLKEQHISIRVCGIVNSNKMLLDSAGIDLSNWSSLLADSQQACDIPALLAWAKEQQLLNPVLVDCTSSEQ VSDLYLDVMNSGLHVVTPNKKSNTRDYAYYQALRQTALKQRRQFLYETTVGAGLPVIDNLKKLLFAGDKLHKFNGILSGS LSFIFGMLDEGMTLSEATGLAREKCFTEPDPRDDLSGMDVARKVLILAREVGLKLELSDVQVESVLPAEFDDSGDVESFM ARLPQVDAAIAAKVAQAKAQGKVLRYVGQIEDGVCRVRIAEVDAQDPLYSVKGGENALAFYSRYYQPIPFVLRGYGAGTE VTAAGAFADVLRTLNWTREVSV >Mature_822_residues MKVMKFGGTSLANWQRFSMAADIVAKSSKLEPIATVLSAPATVTNALLEMVDVAVKGEDYSSVLQHVERVFTSLYQDAVT SMLSSEQSEQLFSGLNAQLVIWQDRLRGISLLQECPDGIRAEIVVAGERLSAALMEQVMLSKGITSAQLDPRALFLGRGR PLESVVDIAISKPRFRALALGEKRVWVMPGFTAADEQGKVVTLGRNGSDYSAAVLAACLDASSCEIWTDVDGVYNTDPRV VADAKLLSQLSYQEAMELSYFGAKVLHPKTIAPIAQFHIPCYIKNSFNPDAPGTLVSNQADETGLQVKAISNLDNQTMFD ISGPGMKGMVGMASRTLAAISRSGVSVSLITQSSSEYSISFCVATSDSAKVKWALEQEFELEIKSDLLEPIAMRHELAIV SLIGDGMRTHKGVAARFFQALAQASVNIIAIAQGSSERSISTVIEQRKTKHAVAACHQGFFDVQQYLDVFLVGCGNVGAG LLEQIKQQSAMLKEQHISIRVCGIVNSNKMLLDSAGIDLSNWSSLLADSQQACDIPALLAWAKEQQLLNPVLVDCTSSEQ VSDLYLDVMNSGLHVVTPNKKSNTRDYAYYQALRQTALKQRRQFLYETTVGAGLPVIDNLKKLLFAGDKLHKFNGILSGS LSFIFGMLDEGMTLSEATGLAREKCFTEPDPRDDLSGMDVARKVLILAREVGLKLELSDVQVESVLPAEFDDSGDVESFM ARLPQVDAAIAAKVAQAKAQGKVLRYVGQIEDGVCRVRIAEVDAQDPLYSVKGGENALAFYSRYYQPIPFVLRGYGAGTE VTAAGAFADVLRTLNWTREVSV
Specific function: Catalyzes 2 nonconsecutive reactions in the common biosynthetic pathway leading from Asp to diaminopimelate and Lys, to Met, and to Thr and Ile. [C]
COG id: COG0527
COG function: function code E; Aspartokinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ACT domains [H]
Homologues:
Organism=Escherichia coli, GI1786183, Length=820, Percent_Identity=57.3170731707317, Blast_Score=940, Evalue=0.0, Organism=Escherichia coli, GI1790376, Length=817, Percent_Identity=30.9669522643819, Blast_Score=364, Evalue=1e-101, Organism=Escherichia coli, GI1790455, Length=469, Percent_Identity=30.0639658848614, Blast_Score=171, Evalue=1e-43, Organism=Saccharomyces cerevisiae, GI6322599, Length=338, Percent_Identity=31.0650887573964, Blast_Score=162, Evalue=2e-40, Organism=Saccharomyces cerevisiae, GI6320893, Length=505, Percent_Identity=26.1386138613861, Blast_Score=144, Evalue=8e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR001048 - InterPro: IPR005106 - InterPro: IPR001341 - InterPro: IPR018042 - InterPro: IPR011147 - InterPro: IPR001342 - InterPro: IPR019811 - InterPro: IPR016040 [H]
Pfam domain/function: PF00696 AA_kinase; PF01842 ACT; PF00742 Homoserine_dh; PF03447 NAD_binding_3 [H]
EC number: =2.7.2.4; =1.1.1.3 [H]
Molecular weight: Translated: 89197; Mature: 89197
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: PS00324 ASPARTOKINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVMKFGGTSLANWQRFSMAADIVAKSSKLEPIATVLSAPATVTNALLEMVDVAVKGEDY CCEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCH SSVLQHVERVFTSLYQDAVTSMLSSEQSEQLFSGLNAQLVIWQDRLRGISLLQECPDGIR HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCCCCE AEIVVAGERLSAALMEQVMLSKGITSAQLDPRALFLGRGRPLESVVDIAISKPRFRALAL EEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCEEEEEE GEKRVWVMPGFTAADEQGKVVTLGRNGSDYSAAVLAACLDASSCEIWTDVDGVYNTDPRV CCCEEEEECCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCE VADAKLLSQLSYQEAMELSYFGAKVLHPKTIAPIAQFHIPCYIKNSFNPDAPGTLVSNQA EHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHCCCEEEECCCCCCCCCCEECCCC DETGLQVKAISNLDNQTMFDISGPGMKGMVGMASRTLAAISRSGVSVSLITQSSSEYSIS CCCCEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEE FCVATSDSAKVKWALEQEFELEIKSDLLEPIAMRHELAIVSLIGDGMRTHKGVAARFFQA EEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LAQASVNIIAIAQGSSERSISTVIEQRKTKHAVAACHQGFFDVQQYLDVFLVGCGNVGAG HHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHH LLEQIKQQSAMLKEQHISIRVCGIVNSNKMLLDSAGIDLSNWSSLLADSQQACDIPALLA HHHHHHHHHHHHHHHCCEEEEEEEECCCEEEEEECCCCHHHHHHHHHCCHHHCCCHHHHH WAKEQQLLNPVLVDCTSSEQVSDLYLDVMNSGLHVVTPNKKSNTRDYAYYQALRQTALKQ HHHHHHHCCCCEEECCCCHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHH RRQFLYETTVGAGLPVIDNLKKLLFAGDKLHKFNGILSGSLSFIFGMLDEGMTLSEATGL HHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH AREKCFTEPDPRDDLSGMDVARKVLILAREVGLKLELSDVQVESVLPAEFDDSGDVESFM HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEECCEEEECCCCCCCCCCCCHHHHH ARLPQVDAAIAAKVAQAKAQGKVLRYVGQIEDGVCRVRIAEVDAQDPLYSVKGGENALAF HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEECCCCHHHHH YSRYYQPIPFVLRGYGAGTEVTAAGAFADVLRTLNWTREVSV HHHHCCCCCHHHCCCCCCCCEEHHHHHHHHHHHHCCHHCCCC >Mature Secondary Structure MKVMKFGGTSLANWQRFSMAADIVAKSSKLEPIATVLSAPATVTNALLEMVDVAVKGEDY CCEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCH SSVLQHVERVFTSLYQDAVTSMLSSEQSEQLFSGLNAQLVIWQDRLRGISLLQECPDGIR HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCCCCE AEIVVAGERLSAALMEQVMLSKGITSAQLDPRALFLGRGRPLESVVDIAISKPRFRALAL EEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCEEEEEE GEKRVWVMPGFTAADEQGKVVTLGRNGSDYSAAVLAACLDASSCEIWTDVDGVYNTDPRV CCCEEEEECCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCE VADAKLLSQLSYQEAMELSYFGAKVLHPKTIAPIAQFHIPCYIKNSFNPDAPGTLVSNQA EHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHCCCEEEECCCCCCCCCCEECCCC DETGLQVKAISNLDNQTMFDISGPGMKGMVGMASRTLAAISRSGVSVSLITQSSSEYSIS CCCCEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEE FCVATSDSAKVKWALEQEFELEIKSDLLEPIAMRHELAIVSLIGDGMRTHKGVAARFFQA EEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LAQASVNIIAIAQGSSERSISTVIEQRKTKHAVAACHQGFFDVQQYLDVFLVGCGNVGAG HHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHH LLEQIKQQSAMLKEQHISIRVCGIVNSNKMLLDSAGIDLSNWSSLLADSQQACDIPALLA HHHHHHHHHHHHHHHCCEEEEEEEECCCEEEEEECCCCHHHHHHHHHCCHHHCCCHHHHH WAKEQQLLNPVLVDCTSSEQVSDLYLDVMNSGLHVVTPNKKSNTRDYAYYQALRQTALKQ HHHHHHHCCCCEEECCCCHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHH RRQFLYETTVGAGLPVIDNLKKLLFAGDKLHKFNGILSGSLSFIFGMLDEGMTLSEATGL HHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH AREKCFTEPDPRDDLSGMDVARKVLILAREVGLKLELSDVQVESVLPAEFDDSGDVESFM HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEECCEEEECCCCCCCCCCCCHHHHH ARLPQVDAAIAAKVAQAKAQGKVLRYVGQIEDGVCRVRIAEVDAQDPLYSVKGGENALAF HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEECCCCHHHHH YSRYYQPIPFVLRGYGAGTEVTAAGAFADVLRTLNWTREVSV HHHHCCCCCHHHCCCCCCCCEEHHHHHHHHHHHHCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7003595; 1630901; 7610040; 9278503; 6277952; 2410621; 387092; 6298218; 390305 [H]