| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is pyrG
Identifier: 120598077
GI number: 120598077
Start: 1426549
End: 1428186
Strand: Direct
Name: pyrG
Synonym: Sputw3181_1254
Alternate gene names: 120598077
Gene position: 1426549-1428186 (Clockwise)
Preceding gene: 120598076
Following gene: 120598078
Centisome position: 30.3
GC content: 45.3
Gene sequence:
>1638_bases ATGACTACAAGGTATATCTTCGTTACTGGTGGCGTTGTTTCATCACTAGGTAAAGGCATTGCAGCAGCATCATTAGCTGC AATTTTAGAGGCCCGCGGTCTCAATGTAACCATCATGAAACTGGACCCTTACATTAACGTTGATCCGGGTACCATGAGCC CAACCCAACATGGCGAAGTATTTGTTACTGAAGACGGTGCAGAAACAGATCTCGACTTGGGTCACTACGAGCGTTTTATC CGTACTAAGATGAATCGTCGTAACAACTTCACTACTGGTCGTATTTACGAAGAAGTACTACGTAAAGAACGTCGTGGCGA TTATTTGGGCGCAACCATTCAGGTTATTCCACATATCACTAATGCGATTAAAGAAAAAGTATTAGCAGGTGGCGAAGGCC ATGATGTGGCTATCGTCGAAATCGGCGGTACTGTGGGTGATATCGAGTCCTTGCCGTTCCTTGAGTCTATCCGTCAGCTC GGCGTTGAGCTTGGCCGCGATCGTACTCTGTTCATGCATTTAACCTTAGTGCCTTTCTTAGGTGCGGCTGGCGAAGTGAA AACTAAGCCAACTCAACACTCAGTAAAAGAGTTGCGTTCTATTGGTATTGCACCCGATGTGTTGATTTGCCGTGGCGATC GCGCAATTCCAGCAAACGAGCGCGCGAAGATTTCTCTATTCTGTAATGTTGAAGAGCGTGCGGTTATTTCATTAAAAGAT GTTGATAGTATTTATAAAATCCCAGCACTGCTGCGTTCACAAGGTTTGGATGACTTAGTGGTTAAGCGTTTCGGTTTAGA ATGCCGTGAAGCTGACTTATCTGAGTGGGAAAATGTGATTTACCAAGAAGCTAATCCAAACGGCGAAGTCGTGATTGGTA TGGTGGGTAAATACATTGAACTGCCAGATGCCTATAAGTCAGTCAACGAAGCATTAAAACACGCAGGCCTTAAAAACCGC GTATCTGTGACCATCAAGTATATTGATTCACAAACCGTAGAAGCTAAAGGCGATGAAGTCCTACAGGGCTTAGACGGTAT CTTAGTACCAGGTGGCTTCGGCGAGCGTGGTGTTGAAGGTAAGATACTGGCGGCAAAATTTGCCCGTGAAAACAAACTAC CTTATTTCGGTATTTGTTTAGGTATGCAAGTTGCTCTGATTGAGTTTGCCCGTAATGTTGCTGGTATGACTGATGCTCAT TCAACTGAATTTAATAAAGAAACGCCATTCCCAGTAGTAGGTTTAATCACTGAATGGGTTGATGAGGAAGGTAATGTTGA GCAACGCCATGAGGCGTCTGACTTAGGTGGCACTATGCGTTTAGGCGCACAATTGTGCCATTTACTTGAAGGCTCTAAAG CGGCACAAGCCTACAAAGGCAATAGCTGTATTGAACGCCATCGTCACCGTTACGAAGTGAACAACAAGTACAGAGAACGC TTAGAGCAAGCTGGAATGGTGTTCAGTGGTTTATCTTCCGATCGCAAGCTGGTAGAAATGATCGAATTAAAAGATCACCC ATGGTTTGTTGCGGGTCAATTCCACCCTGAGTTCACCTCAACGCCACGCGATGGTCACCCATTGTTCGAAGGCTTTATTG CCGCAGCGAGCGCACACCAAAAACGTGATCTGAAGTAA
Upstream 100 bases:
>100_bases ATTGGTGTTTGTCGAATCGCGCCGCCTTTGGTATACTACTGCCCCGTCCTAGTGCTTTCTTACAAGCACGTATTTTCAAA CTCATTTTCTCAGGTTCAGC
Downstream 100 bases:
>100_bases CAATATTTAAGGCCAGAACCGCGACAGTGGGACTGGCCTTTTGTTACACTCAAGCCGCTTTGATATGAAAAGAACTCGTA CCCATGTGTATAAATGATAC
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase [H]
Number of amino acids: Translated: 545; Mature: 544
Protein sequence:
>545_residues MTTRYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPTQHGEVFVTEDGAETDLDLGHYERFI RTKMNRRNNFTTGRIYEEVLRKERRGDYLGATIQVIPHITNAIKEKVLAGGEGHDVAIVEIGGTVGDIESLPFLESIRQL GVELGRDRTLFMHLTLVPFLGAAGEVKTKPTQHSVKELRSIGIAPDVLICRGDRAIPANERAKISLFCNVEERAVISLKD VDSIYKIPALLRSQGLDDLVVKRFGLECREADLSEWENVIYQEANPNGEVVIGMVGKYIELPDAYKSVNEALKHAGLKNR VSVTIKYIDSQTVEAKGDEVLQGLDGILVPGGFGERGVEGKILAAKFARENKLPYFGICLGMQVALIEFARNVAGMTDAH STEFNKETPFPVVGLITEWVDEEGNVEQRHEASDLGGTMRLGAQLCHLLEGSKAAQAYKGNSCIERHRHRYEVNNKYRER LEQAGMVFSGLSSDRKLVEMIELKDHPWFVAGQFHPEFTSTPRDGHPLFEGFIAAASAHQKRDLK
Sequences:
>Translated_545_residues MTTRYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPTQHGEVFVTEDGAETDLDLGHYERFI RTKMNRRNNFTTGRIYEEVLRKERRGDYLGATIQVIPHITNAIKEKVLAGGEGHDVAIVEIGGTVGDIESLPFLESIRQL GVELGRDRTLFMHLTLVPFLGAAGEVKTKPTQHSVKELRSIGIAPDVLICRGDRAIPANERAKISLFCNVEERAVISLKD VDSIYKIPALLRSQGLDDLVVKRFGLECREADLSEWENVIYQEANPNGEVVIGMVGKYIELPDAYKSVNEALKHAGLKNR VSVTIKYIDSQTVEAKGDEVLQGLDGILVPGGFGERGVEGKILAAKFARENKLPYFGICLGMQVALIEFARNVAGMTDAH STEFNKETPFPVVGLITEWVDEEGNVEQRHEASDLGGTMRLGAQLCHLLEGSKAAQAYKGNSCIERHRHRYEVNNKYRER LEQAGMVFSGLSSDRKLVEMIELKDHPWFVAGQFHPEFTSTPRDGHPLFEGFIAAASAHQKRDLK >Mature_544_residues TTRYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPTQHGEVFVTEDGAETDLDLGHYERFIR TKMNRRNNFTTGRIYEEVLRKERRGDYLGATIQVIPHITNAIKEKVLAGGEGHDVAIVEIGGTVGDIESLPFLESIRQLG VELGRDRTLFMHLTLVPFLGAAGEVKTKPTQHSVKELRSIGIAPDVLICRGDRAIPANERAKISLFCNVEERAVISLKDV DSIYKIPALLRSQGLDDLVVKRFGLECREADLSEWENVIYQEANPNGEVVIGMVGKYIELPDAYKSVNEALKHAGLKNRV SVTIKYIDSQTVEAKGDEVLQGLDGILVPGGFGERGVEGKILAAKFARENKLPYFGICLGMQVALIEFARNVAGMTDAHS TEFNKETPFPVVGLITEWVDEEGNVEQRHEASDLGGTMRLGAQLCHLLEGSKAAQAYKGNSCIERHRHRYEVNNKYRERL EQAGMVFSGLSSDRKLVEMIELKDHPWFVAGQFHPEFTSTPRDGHPLFEGFIAAASAHQKRDLK
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen [H]
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Homo sapiens, GI148491070, Length=557, Percent_Identity=44.3447037701975, Blast_Score=474, Evalue=1e-133, Organism=Homo sapiens, GI28559085, Length=560, Percent_Identity=44.2857142857143, Blast_Score=464, Evalue=1e-130, Organism=Homo sapiens, GI28559083, Length=560, Percent_Identity=44.2857142857143, Blast_Score=464, Evalue=1e-130, Organism=Homo sapiens, GI221316689, Length=560, Percent_Identity=44.2857142857143, Blast_Score=464, Evalue=1e-130, Organism=Escherichia coli, GI1789142, Length=545, Percent_Identity=77.4311926605505, Blast_Score=854, Evalue=0.0, Organism=Caenorhabditis elegans, GI25148299, Length=611, Percent_Identity=38.4615384615385, Blast_Score=417, Evalue=1e-117, Organism=Saccharomyces cerevisiae, GI6322563, Length=569, Percent_Identity=43.2337434094903, Blast_Score=459, Evalue=1e-130, Organism=Saccharomyces cerevisiae, GI6319432, Length=570, Percent_Identity=41.2280701754386, Blast_Score=444, Evalue=1e-125, Organism=Drosophila melanogaster, GI24664469, Length=557, Percent_Identity=45.2423698384201, Blast_Score=476, Evalue=1e-134, Organism=Drosophila melanogaster, GI21357815, Length=503, Percent_Identity=43.9363817097416, Blast_Score=406, Evalue=1e-113,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 [H]
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase [H]
EC number: =6.3.4.2 [H]
Molecular weight: Translated: 60182; Mature: 60050
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTRYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPTQHGEV CCEEEEEEECHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEECCEEECCCCCCCCCCCCEE FVTEDGAETDLDLGHYERFIRTKMNRRNNFTTGRIYEEVLRKERRGDYLGATIQVIPHIT EEECCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH NAIKEKVLAGGEGHDVAIVEIGGTVGDIESLPFLESIRQLGVELGRDRTLFMHLTLVPFL HHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHHHC GAAGEVKTKPTQHSVKELRSIGIAPDVLICRGDRAIPANERAKISLFCNVEERAVISLKD CCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEEEECCCCEEEEHHH VDSIYKIPALLRSQGLDDLVVKRFGLECREADLSEWENVIYQEANPNGEVVIGMVGKYIE HHHHHHHHHHHHHCCCHHHHHHHHCCCHHCCHHHHHHHHHEECCCCCCCEEEEECCCHHC LPDAYKSVNEALKHAGLKNRVSVTIKYIDSQTVEAKGDEVLQGLDGILVPGGFGERGVEG CCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHHHCCCCEEECCCCCCCCCCC KILAAKFARENKLPYFGICLGMQVALIEFARNVAGMTDAHSTEFNKETPFPVVGLITEWV CEEEEHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH DEEGNVEQRHEASDLGGTMRLGAQLCHLLEGSKAAQAYKGNSCIERHRHRYEVNNKYRER CCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHCCHHHHHH LEQAGMVFSGLSSDRKLVEMIELKDHPWFVAGQFHPEFTSTPRDGHPLFEGFIAAASAHQ HHHCCCEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH KRDLK HCCCC >Mature Secondary Structure TTRYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPTQHGEV CEEEEEEECHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEECCEEECCCCCCCCCCCCEE FVTEDGAETDLDLGHYERFIRTKMNRRNNFTTGRIYEEVLRKERRGDYLGATIQVIPHIT EEECCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH NAIKEKVLAGGEGHDVAIVEIGGTVGDIESLPFLESIRQLGVELGRDRTLFMHLTLVPFL HHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHHHC GAAGEVKTKPTQHSVKELRSIGIAPDVLICRGDRAIPANERAKISLFCNVEERAVISLKD CCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEEEECCCCEEEEHHH VDSIYKIPALLRSQGLDDLVVKRFGLECREADLSEWENVIYQEANPNGEVVIGMVGKYIE HHHHHHHHHHHHHCCCHHHHHHHHCCCHHCCHHHHHHHHHEECCCCCCCEEEEECCCHHC LPDAYKSVNEALKHAGLKNRVSVTIKYIDSQTVEAKGDEVLQGLDGILVPGGFGERGVEG CCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHHHCCCCEEECCCCCCCCCCC KILAAKFARENKLPYFGICLGMQVALIEFARNVAGMTDAHSTEFNKETPFPVVGLITEWV CEEEEHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH DEEGNVEQRHEASDLGGTMRLGAQLCHLLEGSKAAQAYKGNSCIERHRHRYEVNNKYRER CCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHCCHHHHHH LEQAGMVFSGLSSDRKLVEMIELKDHPWFVAGQFHPEFTSTPRDGHPLFEGFIAAASAHQ HHHCCCEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH KRDLK HCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA