| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is 120598008
Identifier: 120598008
GI number: 120598008
Start: 1335765
End: 1335950
Strand: Direct
Name: 120598008
Synonym: Sputw3181_1185
Alternate gene names: NA
Gene position: 1335765-1335950 (Clockwise)
Preceding gene: 120598007
Following gene: 120598009
Centisome position: 28.37
GC content: 45.16
Gene sequence:
>186_bases ATGGCTAATTGGATCACAAAATCATGGCAAGCTTACATCCGGTGGTGTGATCGGATGGGATTAACACCTGAGAATCGTCG TTGTTGTATGCCGAGGCTTGAGGATCCTCCTTTGGTTTCAAAGCGTTCTTCCTGTTTGACGGAAGATAAGCAGGTTTCAT CGCCTACTGATAAAACGTCTGAATGA
Upstream 100 bases:
>100_bases AAAACTCGCGAACATTAACTCTGTTAGGGTGATCATAGTTGTTGAAATGGCGGTAATTTACCGCCATTTTTGTATCTAAT TTACTTTTCTGGATGCGGTT
Downstream 100 bases:
>100_bases GGCATTTTCTGTGCTAGATACCCATGCTCATTTGGACTTTGCTGAATTTGATGCGGATCGCAGTGATGTTGTGCTAAAAA TGCATCAAGCTGGGATAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 61; Mature: 60
Protein sequence:
>61_residues MANWITKSWQAYIRWCDRMGLTPENRRCCMPRLEDPPLVSKRSSCLTEDKQVSSPTDKTSE
Sequences:
>Translated_61_residues MANWITKSWQAYIRWCDRMGLTPENRRCCMPRLEDPPLVSKRSSCLTEDKQVSSPTDKTSE >Mature_60_residues ANWITKSWQAYIRWCDRMGLTPENRRCCMPRLEDPPLVSKRSSCLTEDKQVSSPTDKTSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7134; Mature: 7003
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.6 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 11.5 %Cys+Met (Translated Protein) 6.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 10.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANWITKSWQAYIRWCDRMGLTPENRRCCMPRLEDPPLVSKRSSCLTEDKQVSSPTDKTS CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCC E C >Mature Secondary Structure ANWITKSWQAYIRWCDRMGLTPENRRCCMPRLEDPPLVSKRSSCLTEDKQVSSPTDKTS CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCC E C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA