Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597952

Identifier: 120597952

GI number: 120597952

Start: 1273574

End: 1273852

Strand: Direct

Name: 120597952

Synonym: Sputw3181_1125

Alternate gene names: NA

Gene position: 1273574-1273852 (Clockwise)

Preceding gene: 120597951

Following gene: 120597953

Centisome position: 27.05

GC content: 54.84

Gene sequence:

>279_bases
ATGACTTCTCGAAAACACGCCAATGGCGACAATGCTCAGAATTGCGCCACCAATGCTCAGCGTTCGGCCCCAGAGCTCTT
GGCGCTCTCTCATAGTGACGTCGCTGTTCTCGCTGAGACTTTTCTCCTGTTAGGAGATCAATCGCGCCTGAAGATCCTGC
TACAGTGCATGCGCGGATCAGTCGCGGTGGGCGACATCGCAGAAACGCTCGATCTATCCCAATTCTTGGTCAGTCATCAT
CTGCGGCTCCTGCGTGGAGCTCGACTTGTGCGTGGATAA

Upstream 100 bases:

>100_bases
ACAGCCATGAAAAGGGTCATAAGCACGACCATTCCGTCCCGGGTCATCAACACTGATGCTGCAGCCAGCGTAGTGCTGGC
AGCTCAGGGACAAGAAATCC

Downstream 100 bases:

>100_bases
CGTCAGGCGAAACATATCTTCTACGGCATCGCGGATGAGCACATCAGTCAAGTGTTTCAGGACATGGTCTGTCACTTCTC
TGAGGAATGATTGCGAATTG

Product: regulatory protein, ArsR

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator Arsr Family; ArsR Family Transcriptional Regulator

Number of amino acids: Translated: 92; Mature: 91

Protein sequence:

>92_residues
MTSRKHANGDNAQNCATNAQRSAPELLALSHSDVAVLAETFLLLGDQSRLKILLQCMRGSVAVGDIAETLDLSQFLVSHH
LRLLRGARLVRG

Sequences:

>Translated_92_residues
MTSRKHANGDNAQNCATNAQRSAPELLALSHSDVAVLAETFLLLGDQSRLKILLQCMRGSVAVGDIAETLDLSQFLVSHH
LRLLRGARLVRG
>Mature_91_residues
TSRKHANGDNAQNCATNAQRSAPELLALSHSDVAVLAETFLLLGDQSRLKILLQCMRGSVAVGDIAETLDLSQFLVSHHL
RLLRGARLVRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9963; Mature: 9831

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSRKHANGDNAQNCATNAQRSAPELLALSHSDVAVLAETFLLLGDQSRLKILLQCMRGS
CCCCCCCCCCCHHHHHHCCHHCCCHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCC
VAVGDIAETLDLSQFLVSHHLRLLRGARLVRG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TSRKHANGDNAQNCATNAQRSAPELLALSHSDVAVLAETFLLLGDQSRLKILLQCMRGS
CCCCCCCCCCHHHHHHCCHHCCCHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCC
VAVGDIAETLDLSQFLVSHHLRLLRGARLVRG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA