Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597926

Identifier: 120597926

GI number: 120597926

Start: 1246091

End: 1247281

Strand: Direct

Name: 120597926

Synonym: Sputw3181_1096

Alternate gene names: NA

Gene position: 1246091-1247281 (Clockwise)

Preceding gene: 120597925

Following gene: 120597927

Centisome position: 26.47

GC content: 42.74

Gene sequence:

>1191_bases
ATGAGTAATACTAAAAGTAACGACGTTCTAAACACAATTCTGGAAAAAATTGAGCTACCAGACAGTGCTTATGAAAAGGC
TGAAAAACGCTATAAGGATCTAGGTGATTGGTTACATCGCCCAGAGTCAACATGCGTGAATTTTGATCCCCACGTGTTTT
CTCAAGGTTCCTTTCGTCTAGGTACGGCGATTAGGCCCGATTCAGAAGAACAGTATGACCTAGATATGGGGTGCAATCTT
CGGCGTGGCCTGGATAAAACGTCTATCACTCAAAAGCAACTAAAGCACCTAGTCGGTCATGAATTAGAGCTTTATCGAAA
CGCCAGAGGCATTAAGGAAGAGCTAGCCGAGAAGAAACGTTGTTGGCGCTTAGAGTATGCCGATGGGCTTAGCTTTCACA
TGGACATAGTTCCGTGTGTGCCAGAGAGTGATACAGGAAGAGGACTGTTGAAAAAGCGGATGGTCGAAAACTCTAAGTTT
GATGAAAACTTGGCTCAAAACGTGTCTCAGCTTGCAGTTTCGATTACCGACAACACAGATTCCACTTATGCAGTTGTGGA
TGAAAATTGGCGTATCAGCAATCCTGAAGGATATGCTCGATGGTTTGAAACGCGCATGAAGACGGCACGGTTAGTAATAA
ACGAACGTGAAATGCGATTTAAAGCCAGTATAGATAGTCTGCCATATTATCAATGGAAGACACCCTTACAACAGGTGATC
CAATTATTGAAGCGTCATCGTGACACTATGTTCAAAAACAATGAGGATAGTAAGCCAATATCGGTAATCATCACTACATT
GGCAGCTAAATCATATAAAGGTGAAAGTGATTTGGCTTCAGCGTTGAATACGGTGCTCTCCGAGATGGATGACCATATTT
CTGCACAAGCGCCAATGATTCCGAACCCAGTTAACCCAGCCGAAGATTTTGCAGACAAGTGGTATGACGAAAAATCTGCT
CAATACCGATTACAAGAAAACTTTTATAAATGGCTGTATCAAGCTAGAGCTGATTTTAGTGCTCTTTGCTCAAGTGATGA
TACGCAACGAATAGTAAATGCGGCGCAAAATGGTTTGGATCTGAAGCTTGATTCAAGTTCGGTAGCACGTCTCTTGGGGA
TTCCTGCGGTGACAGCAAAACCAACTTTCGCAATTCAATCATCTGATCCAAAGCCATGGTTTAAGCAATAG

Upstream 100 bases:

>100_bases
CGGGCCAGAATGCCTAAGGCTGATATGCCATGGCTTATTTATGACCACGACATAAAAACACAACAATTCGTAATGGCAGT
CGAGCTTCGAGGAGATCTAC

Downstream 100 bases:

>100_bases
ATGAAGCACTGGAAGGCTGTAGGCCTAGAGGCTTTTCTCTCGGCCTATCCGAACATTAGATTGGTAGATGTCCATGCAGA
TAAGGTTGAGTTGCAGGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 396; Mature: 395

Protein sequence:

>396_residues
MSNTKSNDVLNTILEKIELPDSAYEKAEKRYKDLGDWLHRPESTCVNFDPHVFSQGSFRLGTAIRPDSEEQYDLDMGCNL
RRGLDKTSITQKQLKHLVGHELELYRNARGIKEELAEKKRCWRLEYADGLSFHMDIVPCVPESDTGRGLLKKRMVENSKF
DENLAQNVSQLAVSITDNTDSTYAVVDENWRISNPEGYARWFETRMKTARLVINEREMRFKASIDSLPYYQWKTPLQQVI
QLLKRHRDTMFKNNEDSKPISVIITTLAAKSYKGESDLASALNTVLSEMDDHISAQAPMIPNPVNPAEDFADKWYDEKSA
QYRLQENFYKWLYQARADFSALCSSDDTQRIVNAAQNGLDLKLDSSSVARLLGIPAVTAKPTFAIQSSDPKPWFKQ

Sequences:

>Translated_396_residues
MSNTKSNDVLNTILEKIELPDSAYEKAEKRYKDLGDWLHRPESTCVNFDPHVFSQGSFRLGTAIRPDSEEQYDLDMGCNL
RRGLDKTSITQKQLKHLVGHELELYRNARGIKEELAEKKRCWRLEYADGLSFHMDIVPCVPESDTGRGLLKKRMVENSKF
DENLAQNVSQLAVSITDNTDSTYAVVDENWRISNPEGYARWFETRMKTARLVINEREMRFKASIDSLPYYQWKTPLQQVI
QLLKRHRDTMFKNNEDSKPISVIITTLAAKSYKGESDLASALNTVLSEMDDHISAQAPMIPNPVNPAEDFADKWYDEKSA
QYRLQENFYKWLYQARADFSALCSSDDTQRIVNAAQNGLDLKLDSSSVARLLGIPAVTAKPTFAIQSSDPKPWFKQ
>Mature_395_residues
SNTKSNDVLNTILEKIELPDSAYEKAEKRYKDLGDWLHRPESTCVNFDPHVFSQGSFRLGTAIRPDSEEQYDLDMGCNLR
RGLDKTSITQKQLKHLVGHELELYRNARGIKEELAEKKRCWRLEYADGLSFHMDIVPCVPESDTGRGLLKKRMVENSKFD
ENLAQNVSQLAVSITDNTDSTYAVVDENWRISNPEGYARWFETRMKTARLVINEREMRFKASIDSLPYYQWKTPLQQVIQ
LLKRHRDTMFKNNEDSKPISVIITTLAAKSYKGESDLASALNTVLSEMDDHISAQAPMIPNPVNPAEDFADKWYDEKSAQ
YRLQENFYKWLYQARADFSALCSSDDTQRIVNAAQNGLDLKLDSSSVARLLGIPAVTAKPTFAIQSSDPKPWFKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45380; Mature: 45248

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNTKSNDVLNTILEKIELPDSAYEKAEKRYKDLGDWLHRPESTCVNFDPHVFSQGSFRL
CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCEEE
GTAIRPDSEEQYDLDMGCNLRRGLDKTSITQKQLKHLVGHELELYRNARGIKEELAEKKR
CCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
CWRLEYADGLSFHMDIVPCVPESDTGRGLLKKRMVENSKFDENLAQNVSQLAVSITDNTD
HEEEECCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHEEEEECCCC
STYAVVDENWRISNPEGYARWFETRMKTARLVINEREMRFKASIDSLPYYQWKTPLQQVI
CEEEEEECCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
QLLKRHRDTMFKNNEDSKPISVIITTLAAKSYKGESDLASALNTVLSEMDDHISAQAPMI
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
PNPVNPAEDFADKWYDEKSAQYRLQENFYKWLYQARADFSALCSSDDTQRIVNAAQNGLD
CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCE
LKLDSSSVARLLGIPAVTAKPTFAIQSSDPKPWFKQ
EEECHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCC
>Mature Secondary Structure 
SNTKSNDVLNTILEKIELPDSAYEKAEKRYKDLGDWLHRPESTCVNFDPHVFSQGSFRL
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCEEE
GTAIRPDSEEQYDLDMGCNLRRGLDKTSITQKQLKHLVGHELELYRNARGIKEELAEKKR
CCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
CWRLEYADGLSFHMDIVPCVPESDTGRGLLKKRMVENSKFDENLAQNVSQLAVSITDNTD
HEEEECCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHEEEEECCCC
STYAVVDENWRISNPEGYARWFETRMKTARLVINEREMRFKASIDSLPYYQWKTPLQQVI
CEEEEEECCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
QLLKRHRDTMFKNNEDSKPISVIITTLAAKSYKGESDLASALNTVLSEMDDHISAQAPMI
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
PNPVNPAEDFADKWYDEKSAQYRLQENFYKWLYQARADFSALCSSDDTQRIVNAAQNGLD
CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCE
LKLDSSSVARLLGIPAVTAKPTFAIQSSDPKPWFKQ
EEECHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA