| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is 120597924
Identifier: 120597924
GI number: 120597924
Start: 1244566
End: 1244934
Strand: Direct
Name: 120597924
Synonym: Sputw3181_1094
Alternate gene names: NA
Gene position: 1244566-1244934 (Clockwise)
Preceding gene: 120597923
Following gene: 120597925
Centisome position: 26.43
GC content: 48.24
Gene sequence:
>369_bases TTGGCTAATGGTAAAACCCATTTGGTCGTCGGGGCTGCGGTTGGTTTAACCGTTGCCCTAGCGGACAACAAAAAACAAGC TGTCAGTCACCATCCTGTAACTGCCATTACGGTTGGCTCTCTATTTGGCAAGCTTCCAGATATTCTGGAACCCTCTTTGG GTAACCCTCACCATCGCCAGTTTTGCCACAGTCTATTGGTGTTAACTGCACTAGGTGTTGGTCTCAAACATTTGTATGAG TGGCAACCGGAAGAGGCAATTGATAAGTGTCTTCGCGGGCTTGGGCTAATCGCTGGATGTGCTTATGTCAGCCATTTGCT CTGTGATGCGACAACACCGCGCTCACTTCCTTTAATTGGCAAACTATAG
Upstream 100 bases:
>100_bases AGCGGACATTGGGTAAAGCGAGATGCTGATACTGGTCGATTCATGGATGTAAAGACATCTGACAAAACGCCTTTTAAAGG CGTCAGGAAGGAGAAATAGT
Downstream 100 bases:
>100_bases GAGTTTTGAATGGTCGCTAAAGTCACAAGACCCATAGACCGTAAAGTTGAGCGAGAACTTTGGGCTCGTGCCGCTGCTCG TTGTCAGTTTAGCGGGTGTA
Product: membrane-bound metal-dependent hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MANGKTHLVVGAAVGLTVALADNKKQAVSHHPVTAITVGSLFGKLPDILEPSLGNPHHRQFCHSLLVLTALGVGLKHLYE WQPEEAIDKCLRGLGLIAGCAYVSHLLCDATTPRSLPLIGKL
Sequences:
>Translated_122_residues MANGKTHLVVGAAVGLTVALADNKKQAVSHHPVTAITVGSLFGKLPDILEPSLGNPHHRQFCHSLLVLTALGVGLKHLYE WQPEEAIDKCLRGLGLIAGCAYVSHLLCDATTPRSLPLIGKL >Mature_121_residues ANGKTHLVVGAAVGLTVALADNKKQAVSHHPVTAITVGSLFGKLPDILEPSLGNPHHRQFCHSLLVLTALGVGLKHLYEW QPEEAIDKCLRGLGLIAGCAYVSHLLCDATTPRSLPLIGKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12916; Mature: 12785
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANGKTHLVVGAAVGLTVALADNKKQAVSHHPVTAITVGSLFGKLPDILEPSLGNPHHRQ CCCCCEEEEEEHHHHEEEEECCCCHHHHHCCCCHHHHHHHHHHCCHHHHCCCCCCHHHHH FCHSLLVLTALGVGLKHLYEWQPEEAIDKCLRGLGLIAGCAYVSHLLCDATTPRSLPLIG HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC KL CC >Mature Secondary Structure ANGKTHLVVGAAVGLTVALADNKKQAVSHHPVTAITVGSLFGKLPDILEPSLGNPHHRQ CCCCEEEEEEHHHHEEEEECCCCHHHHHCCCCHHHHHHHHHHCCHHHHCCCCCCHHHHH FCHSLLVLTALGVGLKHLYEWQPEEAIDKCLRGLGLIAGCAYVSHLLCDATTPRSLPLIG HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC KL CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA