Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597921

Identifier: 120597921

GI number: 120597921

Start: 1242603

End: 1243688

Strand: Direct

Name: 120597921

Synonym: Sputw3181_1091

Alternate gene names: NA

Gene position: 1242603-1243688 (Clockwise)

Preceding gene: 120597920

Following gene: 120597922

Centisome position: 26.39

GC content: 42.27

Gene sequence:

>1086_bases
TTGCTGAAGGCAGTCTCAGAGTTGTTAAATGGGTCACCAGGCCTGAAAGGACGTCAAATTGCCAAGGAGCTGGGACTGGA
TAAGTCTCAAGTGAACTCGTTTCTTCACAAAAACCAGGATACGTTTGTGAAAAATTCAAATCATGAATGGTGCTTGATAC
GGGCTCAGCATGTGGAAATTGATTTCGCTACAGGTTGGATTGATGATAAAGCCTTTGAGAGTGCTATCGGTAAGCTTGCG
TATCAAAAAGATGCAAACAAGATAACATTTAGATTCGGCATCGATTGTAAGTTTTTGCTGATAGCATTGGCCCGTTTTCT
TGCTCTCGCGAATCAGCTTACTGCGAATGGTAAAGATGTGGTGATGGATACTACAGCATGTCCTAATACTCACAGTTTTT
TCAGCAGAAATGGCTTCTTTGATTATCTTAATCAAAGTGTCACTTGTCTTCCTGAAAGGCCCGTTTTGTCAGCTGCTAAA
ACTTATCGGGATAATAGCGATACCTTGGTCGAACTAGGAGAAATTGCACAGCCAACCCAAAACAAGGAGCTTGTAATTCG
TTTGGGCGACAGGTTTGTAGAGCATTCTTCAGTTAGCTATTTCTTAGCGGCTAAGACTGTTTTTTCAGAGCTTGTAGGCA
ACGTTACTGATCACAGTGAATCCAAAATACCTGGACTAGCAGGTCTGCAAGTGTATCGACCGTATAATAAACCAAAGCAT
ATTCAAACAGTCATATCCGACTCTGGTTTAGGTATTGCCGCTACCTTGAGAACAACGTTACAAAGTGAACATCCGAAGTT
GTACGCACAGTTTTCAGCGGAAAGTGTTGAGAATGACATTGCGCTCGTTCAAAAAGCATTTACATCTGGTGAGGTTAGTC
GCTTTGGTAAAGGCCGGGGGCTAGGCTTTAAGAGTAGTCGAGAGCACGCTAGCAAAGAGAAAGTTATCATTGTTATTAGG
CAGCTAACTTTCTCATTGGCTTTGGAATACTCGAAGGGACAACTTATCAATGTTTCTGAAGATCGAGGGTTGGTCCCTAT
CACAGGAACCCACATCTGTTTTGACTTCTATGTTGACAATTTCTGA

Upstream 100 bases:

>100_bases
CTCTACAAGTTGTTCGCAGGAGATTCAGCATTTAAAGCGTCGTGGACGCAAAGTATGCAACGAATGGTAGGTATGTAGGT
AGGAAGAAAGGAGTGATGGT

Downstream 100 bases:

>100_bases
TAAATAGTGTCAACTTAAGCAGATGAAACAGTTAACTCATAAAATTCTTCTTTCAGAAGTCGTAGGTTCTGACCATGCCT
TTGGTAACGATGAAGGTAGT

Product: ATP-binding region, ATPase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MLKAVSELLNGSPGLKGRQIAKELGLDKSQVNSFLHKNQDTFVKNSNHEWCLIRAQHVEIDFATGWIDDKAFESAIGKLA
YQKDANKITFRFGIDCKFLLIALARFLALANQLTANGKDVVMDTTACPNTHSFFSRNGFFDYLNQSVTCLPERPVLSAAK
TYRDNSDTLVELGEIAQPTQNKELVIRLGDRFVEHSSVSYFLAAKTVFSELVGNVTDHSESKIPGLAGLQVYRPYNKPKH
IQTVISDSGLGIAATLRTTLQSEHPKLYAQFSAESVENDIALVQKAFTSGEVSRFGKGRGLGFKSSREHASKEKVIIVIR
QLTFSLALEYSKGQLINVSEDRGLVPITGTHICFDFYVDNF

Sequences:

>Translated_361_residues
MLKAVSELLNGSPGLKGRQIAKELGLDKSQVNSFLHKNQDTFVKNSNHEWCLIRAQHVEIDFATGWIDDKAFESAIGKLA
YQKDANKITFRFGIDCKFLLIALARFLALANQLTANGKDVVMDTTACPNTHSFFSRNGFFDYLNQSVTCLPERPVLSAAK
TYRDNSDTLVELGEIAQPTQNKELVIRLGDRFVEHSSVSYFLAAKTVFSELVGNVTDHSESKIPGLAGLQVYRPYNKPKH
IQTVISDSGLGIAATLRTTLQSEHPKLYAQFSAESVENDIALVQKAFTSGEVSRFGKGRGLGFKSSREHASKEKVIIVIR
QLTFSLALEYSKGQLINVSEDRGLVPITGTHICFDFYVDNF
>Mature_361_residues
MLKAVSELLNGSPGLKGRQIAKELGLDKSQVNSFLHKNQDTFVKNSNHEWCLIRAQHVEIDFATGWIDDKAFESAIGKLA
YQKDANKITFRFGIDCKFLLIALARFLALANQLTANGKDVVMDTTACPNTHSFFSRNGFFDYLNQSVTCLPERPVLSAAK
TYRDNSDTLVELGEIAQPTQNKELVIRLGDRFVEHSSVSYFLAAKTVFSELVGNVTDHSESKIPGLAGLQVYRPYNKPKH
IQTVISDSGLGIAATLRTTLQSEHPKLYAQFSAESVENDIALVQKAFTSGEVSRFGKGRGLGFKSSREHASKEKVIIVIR
QLTFSLALEYSKGQLINVSEDRGLVPITGTHICFDFYVDNF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40078; Mature: 40078

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKAVSELLNGSPGLKGRQIAKELGLDKSQVNSFLHKNQDTFVKNSNHEWCLIRAQHVEI
CHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCEEECCCCCEEEEEEEEEEE
DFATGWIDDKAFESAIGKLAYQKDANKITFRFGIDCKFLLIALARFLALANQLTANGKDV
EEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEE
VMDTTACPNTHSFFSRNGFFDYLNQSVTCLPERPVLSAAKTYRDNSDTLVELGEIAQPTQ
EEECCCCCCCHHHHHCCCCHHHHCCCEEECCCCCHHHHHHHHCCCCCHHHHHHHHCCCCC
NKELVIRLGDRFVEHSSVSYFLAAKTVFSELVGNVTDHSESKIPGLAGLQVYRPYNKPKH
CCEEEEEECHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCHH
IQTVISDSGLGIAATLRTTLQSEHPKLYAQFSAESVENDIALVQKAFTSGEVSRFGKGRG
HHHHHCCCCCCCHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHCCCCHHHCCCCCC
LGFKSSREHASKEKVIIVIRQLTFSLALEYSKGQLINVSEDRGLVPITGTHICFDFYVDN
CCCCCCHHHCCCCEEEEEEEHHHHHHEEEECCCCEEEECCCCCEEEECCCEEEEEEEECC
F
C
>Mature Secondary Structure
MLKAVSELLNGSPGLKGRQIAKELGLDKSQVNSFLHKNQDTFVKNSNHEWCLIRAQHVEI
CHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCEEECCCCCEEEEEEEEEEE
DFATGWIDDKAFESAIGKLAYQKDANKITFRFGIDCKFLLIALARFLALANQLTANGKDV
EEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEE
VMDTTACPNTHSFFSRNGFFDYLNQSVTCLPERPVLSAAKTYRDNSDTLVELGEIAQPTQ
EEECCCCCCCHHHHHCCCCHHHHCCCEEECCCCCHHHHHHHHCCCCCHHHHHHHHCCCCC
NKELVIRLGDRFVEHSSVSYFLAAKTVFSELVGNVTDHSESKIPGLAGLQVYRPYNKPKH
CCEEEEEECHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCHH
IQTVISDSGLGIAATLRTTLQSEHPKLYAQFSAESVENDIALVQKAFTSGEVSRFGKGRG
HHHHHCCCCCCCHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHCCCCHHHCCCCCC
LGFKSSREHASKEKVIIVIRQLTFSLALEYSKGQLINVSEDRGLVPITGTHICFDFYVDN
CCCCCCHHHCCCCEEEEEEEHHHHHHEEEECCCCEEEECCCCCEEEECCCEEEEEEEECC
F
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA