| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is 120597921
Identifier: 120597921
GI number: 120597921
Start: 1242603
End: 1243688
Strand: Direct
Name: 120597921
Synonym: Sputw3181_1091
Alternate gene names: NA
Gene position: 1242603-1243688 (Clockwise)
Preceding gene: 120597920
Following gene: 120597922
Centisome position: 26.39
GC content: 42.27
Gene sequence:
>1086_bases TTGCTGAAGGCAGTCTCAGAGTTGTTAAATGGGTCACCAGGCCTGAAAGGACGTCAAATTGCCAAGGAGCTGGGACTGGA TAAGTCTCAAGTGAACTCGTTTCTTCACAAAAACCAGGATACGTTTGTGAAAAATTCAAATCATGAATGGTGCTTGATAC GGGCTCAGCATGTGGAAATTGATTTCGCTACAGGTTGGATTGATGATAAAGCCTTTGAGAGTGCTATCGGTAAGCTTGCG TATCAAAAAGATGCAAACAAGATAACATTTAGATTCGGCATCGATTGTAAGTTTTTGCTGATAGCATTGGCCCGTTTTCT TGCTCTCGCGAATCAGCTTACTGCGAATGGTAAAGATGTGGTGATGGATACTACAGCATGTCCTAATACTCACAGTTTTT TCAGCAGAAATGGCTTCTTTGATTATCTTAATCAAAGTGTCACTTGTCTTCCTGAAAGGCCCGTTTTGTCAGCTGCTAAA ACTTATCGGGATAATAGCGATACCTTGGTCGAACTAGGAGAAATTGCACAGCCAACCCAAAACAAGGAGCTTGTAATTCG TTTGGGCGACAGGTTTGTAGAGCATTCTTCAGTTAGCTATTTCTTAGCGGCTAAGACTGTTTTTTCAGAGCTTGTAGGCA ACGTTACTGATCACAGTGAATCCAAAATACCTGGACTAGCAGGTCTGCAAGTGTATCGACCGTATAATAAACCAAAGCAT ATTCAAACAGTCATATCCGACTCTGGTTTAGGTATTGCCGCTACCTTGAGAACAACGTTACAAAGTGAACATCCGAAGTT GTACGCACAGTTTTCAGCGGAAAGTGTTGAGAATGACATTGCGCTCGTTCAAAAAGCATTTACATCTGGTGAGGTTAGTC GCTTTGGTAAAGGCCGGGGGCTAGGCTTTAAGAGTAGTCGAGAGCACGCTAGCAAAGAGAAAGTTATCATTGTTATTAGG CAGCTAACTTTCTCATTGGCTTTGGAATACTCGAAGGGACAACTTATCAATGTTTCTGAAGATCGAGGGTTGGTCCCTAT CACAGGAACCCACATCTGTTTTGACTTCTATGTTGACAATTTCTGA
Upstream 100 bases:
>100_bases CTCTACAAGTTGTTCGCAGGAGATTCAGCATTTAAAGCGTCGTGGACGCAAAGTATGCAACGAATGGTAGGTATGTAGGT AGGAAGAAAGGAGTGATGGT
Downstream 100 bases:
>100_bases TAAATAGTGTCAACTTAAGCAGATGAAACAGTTAACTCATAAAATTCTTCTTTCAGAAGTCGTAGGTTCTGACCATGCCT TTGGTAACGATGAAGGTAGT
Product: ATP-binding region, ATPase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 361; Mature: 361
Protein sequence:
>361_residues MLKAVSELLNGSPGLKGRQIAKELGLDKSQVNSFLHKNQDTFVKNSNHEWCLIRAQHVEIDFATGWIDDKAFESAIGKLA YQKDANKITFRFGIDCKFLLIALARFLALANQLTANGKDVVMDTTACPNTHSFFSRNGFFDYLNQSVTCLPERPVLSAAK TYRDNSDTLVELGEIAQPTQNKELVIRLGDRFVEHSSVSYFLAAKTVFSELVGNVTDHSESKIPGLAGLQVYRPYNKPKH IQTVISDSGLGIAATLRTTLQSEHPKLYAQFSAESVENDIALVQKAFTSGEVSRFGKGRGLGFKSSREHASKEKVIIVIR QLTFSLALEYSKGQLINVSEDRGLVPITGTHICFDFYVDNF
Sequences:
>Translated_361_residues MLKAVSELLNGSPGLKGRQIAKELGLDKSQVNSFLHKNQDTFVKNSNHEWCLIRAQHVEIDFATGWIDDKAFESAIGKLA YQKDANKITFRFGIDCKFLLIALARFLALANQLTANGKDVVMDTTACPNTHSFFSRNGFFDYLNQSVTCLPERPVLSAAK TYRDNSDTLVELGEIAQPTQNKELVIRLGDRFVEHSSVSYFLAAKTVFSELVGNVTDHSESKIPGLAGLQVYRPYNKPKH IQTVISDSGLGIAATLRTTLQSEHPKLYAQFSAESVENDIALVQKAFTSGEVSRFGKGRGLGFKSSREHASKEKVIIVIR QLTFSLALEYSKGQLINVSEDRGLVPITGTHICFDFYVDNF >Mature_361_residues MLKAVSELLNGSPGLKGRQIAKELGLDKSQVNSFLHKNQDTFVKNSNHEWCLIRAQHVEIDFATGWIDDKAFESAIGKLA YQKDANKITFRFGIDCKFLLIALARFLALANQLTANGKDVVMDTTACPNTHSFFSRNGFFDYLNQSVTCLPERPVLSAAK TYRDNSDTLVELGEIAQPTQNKELVIRLGDRFVEHSSVSYFLAAKTVFSELVGNVTDHSESKIPGLAGLQVYRPYNKPKH IQTVISDSGLGIAATLRTTLQSEHPKLYAQFSAESVENDIALVQKAFTSGEVSRFGKGRGLGFKSSREHASKEKVIIVIR QLTFSLALEYSKGQLINVSEDRGLVPITGTHICFDFYVDNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40078; Mature: 40078
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKAVSELLNGSPGLKGRQIAKELGLDKSQVNSFLHKNQDTFVKNSNHEWCLIRAQHVEI CHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCEEECCCCCEEEEEEEEEEE DFATGWIDDKAFESAIGKLAYQKDANKITFRFGIDCKFLLIALARFLALANQLTANGKDV EEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEE VMDTTACPNTHSFFSRNGFFDYLNQSVTCLPERPVLSAAKTYRDNSDTLVELGEIAQPTQ EEECCCCCCCHHHHHCCCCHHHHCCCEEECCCCCHHHHHHHHCCCCCHHHHHHHHCCCCC NKELVIRLGDRFVEHSSVSYFLAAKTVFSELVGNVTDHSESKIPGLAGLQVYRPYNKPKH CCEEEEEECHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCHH IQTVISDSGLGIAATLRTTLQSEHPKLYAQFSAESVENDIALVQKAFTSGEVSRFGKGRG HHHHHCCCCCCCHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHCCCCHHHCCCCCC LGFKSSREHASKEKVIIVIRQLTFSLALEYSKGQLINVSEDRGLVPITGTHICFDFYVDN CCCCCCHHHCCCCEEEEEEEHHHHHHEEEECCCCEEEECCCCCEEEECCCEEEEEEEECC F C >Mature Secondary Structure MLKAVSELLNGSPGLKGRQIAKELGLDKSQVNSFLHKNQDTFVKNSNHEWCLIRAQHVEI CHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCEEECCCCCEEEEEEEEEEE DFATGWIDDKAFESAIGKLAYQKDANKITFRFGIDCKFLLIALARFLALANQLTANGKDV EEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEE VMDTTACPNTHSFFSRNGFFDYLNQSVTCLPERPVLSAAKTYRDNSDTLVELGEIAQPTQ EEECCCCCCCHHHHHCCCCHHHHCCCEEECCCCCHHHHHHHHCCCCCHHHHHHHHCCCCC NKELVIRLGDRFVEHSSVSYFLAAKTVFSELVGNVTDHSESKIPGLAGLQVYRPYNKPKH CCEEEEEECHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCHH IQTVISDSGLGIAATLRTTLQSEHPKLYAQFSAESVENDIALVQKAFTSGEVSRFGKGRG HHHHHCCCCCCCHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHCCCCHHHCCCCCC LGFKSSREHASKEKVIIVIRQLTFSLALEYSKGQLINVSEDRGLVPITGTHICFDFYVDN CCCCCCHHHCCCCEEEEEEEHHHHHHEEEECCCCEEEECCCCCEEEECCCEEEEEEEECC F C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA