Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597841

Identifier: 120597841

GI number: 120597841

Start: 1156951

End: 1157820

Strand: Direct

Name: 120597841

Synonym: Sputw3181_1011

Alternate gene names: NA

Gene position: 1156951-1157820 (Clockwise)

Preceding gene: 120597840

Following gene: 120597842

Centisome position: 24.57

GC content: 48.74

Gene sequence:

>870_bases
ATGTCGGATTACATTTATCGCAGCCCTGTGGTCGCGCTTGCCTCCCGTTATCCTATAGTGGAAATCAGCAGTGTCGAACC
TGATGCACGTTTAGTGGCAGCCATGGGATTATCGAGTGAATTTGCCTTTAGCCGTAAGGTGCTGCGCGCAACCGTTGAAG
TGCCACACATCGGCAAGTGTGACTATTATGTGGTGCACTTTAAGTCAAAACGTGCCGGATTAGCACTCGAGCCTAAGCTA
TTTGAACATCAGCCACTTGGGTTAGATAACTTGGCTCCCGCAGCAAGCATGAAACTGCATTCAGAAACCCAATTACTCAC
AGAGCAAGCCTTAGGCCGCTGGGCATCCACCATGCAGCGCGGCGCAGAAGCAGCATTATTATTCAATGGCATATTGGTAC
GTAGGCAAGAATCTAAACATCCAGTTATCGTGATGGGGGACTTTAATGACAGCCTGTCGATGGGCGCCTTAGATGCGTTA
ACGATACAGGGCGATAGCATTCACAGTAATGACATTAAAGCCGCTGGCCTTGGGCATTTATCGGATGCGGCATTAGCGGC
GGTGTTTGCTCAGTATCAACTTAAGGATGCCTATGAGTTATTTATTGAAGCGAACTTGAGGGACAGTTTGACTGGCAATA
CCGCTTACCATAGGGAACACAGAGCGGCGACCCATTACTATGGCCCCAAAGGTTCTGTGCTGGATTATATTTTGCTTTCG
AGTGAGTTTGATGCGAGCCATGGCCGCAGTTTAGCGCAAGTCGTAGATTATCAAACCTGCGATAGACACTTAGTCAGACC
TGAATATGAACGCGACGCCTACAGTACTGACCATGCGCCCGTCATTGTTGAGTTAGCGCTACGTAGCTAA

Upstream 100 bases:

>100_bases
CGGCCAAAGGTTCATCACTGGACTTCAAGATCACCAAACACAACTACTCAAATTACTCGGTAGATTCTATGAGGTAGTTT
ATTCCTAAATTAGCTGCGGA

Downstream 100 bases:

>100_bases
GTTTTCGTGTTTACTGATTAATTCGTCTTATTTCAAATCATGTCAGTTGTCTTTATCGCGCTGGCATCTCCTCGCTACGG
TTTTGTTAGCGTTGTTTCAT

Product: endonuclease/exonuclease/phosphatase

Products: NA

Alternate protein names: Endonuclease/Exonuclease/Phosphatase Family Protein

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MSDYIYRSPVVALASRYPIVEISSVEPDARLVAAMGLSSEFAFSRKVLRATVEVPHIGKCDYYVVHFKSKRAGLALEPKL
FEHQPLGLDNLAPAASMKLHSETQLLTEQALGRWASTMQRGAEAALLFNGILVRRQESKHPVIVMGDFNDSLSMGALDAL
TIQGDSIHSNDIKAAGLGHLSDAALAAVFAQYQLKDAYELFIEANLRDSLTGNTAYHREHRAATHYYGPKGSVLDYILLS
SEFDASHGRSLAQVVDYQTCDRHLVRPEYERDAYSTDHAPVIVELALRS

Sequences:

>Translated_289_residues
MSDYIYRSPVVALASRYPIVEISSVEPDARLVAAMGLSSEFAFSRKVLRATVEVPHIGKCDYYVVHFKSKRAGLALEPKL
FEHQPLGLDNLAPAASMKLHSETQLLTEQALGRWASTMQRGAEAALLFNGILVRRQESKHPVIVMGDFNDSLSMGALDAL
TIQGDSIHSNDIKAAGLGHLSDAALAAVFAQYQLKDAYELFIEANLRDSLTGNTAYHREHRAATHYYGPKGSVLDYILLS
SEFDASHGRSLAQVVDYQTCDRHLVRPEYERDAYSTDHAPVIVELALRS
>Mature_288_residues
SDYIYRSPVVALASRYPIVEISSVEPDARLVAAMGLSSEFAFSRKVLRATVEVPHIGKCDYYVVHFKSKRAGLALEPKLF
EHQPLGLDNLAPAASMKLHSETQLLTEQALGRWASTMQRGAEAALLFNGILVRRQESKHPVIVMGDFNDSLSMGALDALT
IQGDSIHSNDIKAAGLGHLSDAALAAVFAQYQLKDAYELFIEANLRDSLTGNTAYHREHRAATHYYGPKGSVLDYILLSS
EFDASHGRSLAQVVDYQTCDRHLVRPEYERDAYSTDHAPVIVELALRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31918; Mature: 31787

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDYIYRSPVVALASRYPIVEISSVEPDARLVAAMGLSSEFAFSRKVLRATVEVPHIGKC
CCCCCCCCHHHHHHCCCCEEEEECCCCCHHHHEECCCCHHHHHHHHHHHHHCCCCCCCCC
DYYVVHFKSKRAGLALEPKLFEHQPLGLDNLAPAASMKLHSETQLLTEQALGRWASTMQR
CEEEEEEECCCCCCEECCHHHCCCCCCCCCCCCCHHEEECHHHHHHHHHHHHHHHHHHHH
GAEAALLFNGILVRRQESKHPVIVMGDFNDSLSMGALDALTIQGDSIHSNDIKAAGLGHL
CCCEEEEECCEEEEEECCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCC
SDAALAAVFAQYQLKDAYELFIEANLRDSLTGNTAYHREHRAATHYYGPKGSVLDYILLS
HHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCHHHHHHHCCCCEECCCCCCEEEEEEC
SEFDASHGRSLAQVVDYQTCDRHLVRPEYERDAYSTDHAPVIVELALRS
CCCCCCCCCHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCEEEEEEECC
>Mature Secondary Structure 
SDYIYRSPVVALASRYPIVEISSVEPDARLVAAMGLSSEFAFSRKVLRATVEVPHIGKC
CCCCCCCHHHHHHCCCCEEEEECCCCCHHHHEECCCCHHHHHHHHHHHHHCCCCCCCCC
DYYVVHFKSKRAGLALEPKLFEHQPLGLDNLAPAASMKLHSETQLLTEQALGRWASTMQR
CEEEEEEECCCCCCEECCHHHCCCCCCCCCCCCCHHEEECHHHHHHHHHHHHHHHHHHHH
GAEAALLFNGILVRRQESKHPVIVMGDFNDSLSMGALDALTIQGDSIHSNDIKAAGLGHL
CCCEEEEECCEEEEEECCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCC
SDAALAAVFAQYQLKDAYELFIEANLRDSLTGNTAYHREHRAATHYYGPKGSVLDYILLS
HHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCHHHHHHHCCCCEECCCCCCEEEEEEC
SEFDASHGRSLAQVVDYQTCDRHLVRPEYERDAYSTDHAPVIVELALRS
CCCCCCCCCHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA