Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597775

Identifier: 120597775

GI number: 120597775

Start: 1075096

End: 1075479

Strand: Direct

Name: 120597775

Synonym: Sputw3181_0945

Alternate gene names: NA

Gene position: 1075096-1075479 (Clockwise)

Preceding gene: 120597774

Following gene: 120597777

Centisome position: 22.83

GC content: 48.44

Gene sequence:

>384_bases
ATGAACACCCTACTTATTTGCTTATTTATCGCTATGTTATTGCCATATCTTGCGAAAGGTCCAGTGGCTTGGGCTATGGC
AAAGGCGGGTGGTTACGATAATAATCATCCCCGTGCTCAGCAAGCACAGCTAACCGGTTTTGGCGCTCGCGCTTTAGCGG
GACATCAAAATGCCTTTGAATCATTGCTGGTGTTTGGCCTAGCCGTATTAGTGGTTATCGCCACGGGCAAAGTGAATCCC
ACCACTGAGTGGCTCGCCATCGTCCATGTCGGCGCCCGCTTTGTGTATCACATCCTCTATCTTGCCAACAAAGGCACCTT
AAGATCCCTCACATGGTTTGTTGCCATCTTCAGTGCTTTCGGGATTTTCTTTCAGGCTTTTTAA

Upstream 100 bases:

>100_bases
AACGGGGAGCTTAGTTTTCCCCATCTTAGCGCATAATCTGGTGAATTTTGCTGGCCAATTTGTATAAAAGCTCAAGCATT
ATAAAAAAGGAAGCACACCC

Downstream 100 bases:

>100_bases
GCTTGGATATTAAAGGATCTGCGCCAGTTTTTTGATACTTTCCCGCAGCTCATCAGGCGTATGAGCGGCATAGCCCAGTA
AGATTGCTTGCTTTGGATAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MNTLLICLFIAMLLPYLAKGPVAWAMAKAGGYDNNHPRAQQAQLTGFGARALAGHQNAFESLLVFGLAVLVVIATGKVNP
TTEWLAIVHVGARFVYHILYLANKGTLRSLTWFVAIFSAFGIFFQAF

Sequences:

>Translated_127_residues
MNTLLICLFIAMLLPYLAKGPVAWAMAKAGGYDNNHPRAQQAQLTGFGARALAGHQNAFESLLVFGLAVLVVIATGKVNP
TTEWLAIVHVGARFVYHILYLANKGTLRSLTWFVAIFSAFGIFFQAF
>Mature_127_residues
MNTLLICLFIAMLLPYLAKGPVAWAMAKAGGYDNNHPRAQQAQLTGFGARALAGHQNAFESLLVFGLAVLVVIATGKVNP
TTEWLAIVHVGARFVYHILYLANKGTLRSLTWFVAIFSAFGIFFQAF

Specific function: Unknown

COG id: COG3686

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13844; Mature: 13844

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTLLICLFIAMLLPYLAKGPVAWAMAKAGGYDNNHPRAQQAQLTGFGARALAGHQNAFE
CCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHCCHHHHH
SLLVFGLAVLVVIATGKVNPTTEWLAIVHVGARFVYHILYLANKGTLRSLTWFVAIFSAF
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
GIFFQAF
HHHHHCC
>Mature Secondary Structure
MNTLLICLFIAMLLPYLAKGPVAWAMAKAGGYDNNHPRAQQAQLTGFGARALAGHQNAFE
CCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHCCHHHHH
SLLVFGLAVLVVIATGKVNPTTEWLAIVHVGARFVYHILYLANKGTLRSLTWFVAIFSAF
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
GIFFQAF
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA