| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is cysC [H]
Identifier: 120597735
GI number: 120597735
Start: 1033547
End: 1034164
Strand: Direct
Name: cysC [H]
Synonym: Sputw3181_0905
Alternate gene names: 120597735
Gene position: 1033547-1034164 (Clockwise)
Preceding gene: 120597734
Following gene: 120597737
Centisome position: 21.95
GC content: 50.16
Gene sequence:
>618_bases ATGACAAATATCGTGTGGCATCAACATCCTGTAGACCAAGCCGCCAGAGCCGAGCAGAAAGGTCAAAACCCTGTGCTACT TTGGTTTACCGGACTTTCTGGCGCGGGCAAGTCAACATTGGCTGGTGCATTAGAGCGGGCCTTATTTGAGGCGGGATTCC ACACTTATTTGCTCGATGGCGATAATGTGCGCCATGGCCTGTGTAAAGACTTAGGGTTTACGGTTGAGGACCGTGACGAG AACCTGCGCCGTGTTGGCGAAGTGGCTAAATTGATGGTGGATGCGGGGCTTGTGGTGTTATCTGCTTTTATATCACCGAC TCGCGAAGAACGTGATGGTATTCGCGCCCGTTTTCCTGCGGGGCAGTTCATTGAAGTGCATGTGTCGACGCCATTAAGTG TGTGCGAACAGCGGGATCCTAAGGGGTTGTACGTTAAAGCGCGCAGTGGCGAGATCAGCAATTTTACAGGGATTTCATCG CCCTATGAAGCACCACTGGCCGCGGAATTAACCATAGATACCAGCAAAGGTGATTTAGCGACCCAAGTGCGTGCCTTAAT CGATTATTTAACTGCGATCAATGTCATCAATACCGATAAGACAAAGACAGTCGCTTAA
Upstream 100 bases:
>100_bases GTGATATTTATGGTGCCGATCATCTTTCCATTTTAGTGATTAGCTTGTGTTTATAGCCCTTATGTTAGCGGTTAGTCAAC ATGGGGATTGAGGAGTTTTT
Downstream 100 bases:
>100_bases CATTTAGCCTTTACCTTGCTAAAAAGGAGCTTTTTGCTCCTTTTTAGGGTGTGATACCTATTCTATTTTGAAATCTTTGG CAAATAGTAGTTGCAGTGCT
Product: adenylylsulfate kinase
Products: NA
Alternate protein names: APS kinase; ATP adenosine-5'-phosphosulfate 3'-phosphotransferase; Adenosine-5'-phosphosulfate kinase [H]
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MTNIVWHQHPVDQAARAEQKGQNPVLLWFTGLSGAGKSTLAGALERALFEAGFHTYLLDGDNVRHGLCKDLGFTVEDRDE NLRRVGEVAKLMVDAGLVVLSAFISPTREERDGIRARFPAGQFIEVHVSTPLSVCEQRDPKGLYVKARSGEISNFTGISS PYEAPLAAELTIDTSKGDLATQVRALIDYLTAINVINTDKTKTVA
Sequences:
>Translated_205_residues MTNIVWHQHPVDQAARAEQKGQNPVLLWFTGLSGAGKSTLAGALERALFEAGFHTYLLDGDNVRHGLCKDLGFTVEDRDE NLRRVGEVAKLMVDAGLVVLSAFISPTREERDGIRARFPAGQFIEVHVSTPLSVCEQRDPKGLYVKARSGEISNFTGISS PYEAPLAAELTIDTSKGDLATQVRALIDYLTAINVINTDKTKTVA >Mature_204_residues TNIVWHQHPVDQAARAEQKGQNPVLLWFTGLSGAGKSTLAGALERALFEAGFHTYLLDGDNVRHGLCKDLGFTVEDRDEN LRRVGEVAKLMVDAGLVVLSAFISPTREERDGIRARFPAGQFIEVHVSTPLSVCEQRDPKGLYVKARSGEISNFTGISSP YEAPLAAELTIDTSKGDLATQVRALIDYLTAINVINTDKTKTVA
Specific function: Catalyzes the synthesis of activated sulfate [H]
COG id: COG0529
COG function: function code P; Adenylylsulfate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the APS kinase family [H]
Homologues:
Organism=Homo sapiens, GI46094058, Length=212, Percent_Identity=46.2264150943396, Blast_Score=181, Evalue=3e-46, Organism=Homo sapiens, GI34447231, Length=201, Percent_Identity=43.7810945273632, Blast_Score=170, Evalue=1e-42, Organism=Homo sapiens, GI62912492, Length=201, Percent_Identity=43.7810945273632, Blast_Score=170, Evalue=1e-42, Organism=Escherichia coli, GI1789107, Length=197, Percent_Identity=60.9137055837564, Blast_Score=241, Evalue=3e-65, Organism=Caenorhabditis elegans, GI17542422, Length=197, Percent_Identity=51.7766497461929, Blast_Score=200, Evalue=4e-52, Organism=Saccharomyces cerevisiae, GI6322852, Length=197, Percent_Identity=47.2081218274112, Blast_Score=182, Evalue=4e-47, Organism=Drosophila melanogaster, GI24667032, Length=201, Percent_Identity=44.7761194029851, Blast_Score=161, Evalue=3e-40, Organism=Drosophila melanogaster, GI24667028, Length=201, Percent_Identity=44.7761194029851, Blast_Score=161, Evalue=3e-40, Organism=Drosophila melanogaster, GI24667036, Length=201, Percent_Identity=44.7761194029851, Blast_Score=161, Evalue=3e-40, Organism=Drosophila melanogaster, GI116007838, Length=201, Percent_Identity=44.7761194029851, Blast_Score=160, Evalue=4e-40, Organism=Drosophila melanogaster, GI24667044, Length=201, Percent_Identity=44.7761194029851, Blast_Score=160, Evalue=4e-40, Organism=Drosophila melanogaster, GI24667040, Length=201, Percent_Identity=44.7761194029851, Blast_Score=160, Evalue=4e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002891 [H]
Pfam domain/function: PF01583 APS_kinase [H]
EC number: =2.7.1.25 [H]
Molecular weight: Translated: 22337; Mature: 22205
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNIVWHQHPVDQAARAEQKGQNPVLLWFTGLSGAGKSTLAGALERALFEAGFHTYLLDG CCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECC DNVRHGLCKDLGFTVEDRDENLRRVGEVAKLMVDAGLVVLSAFISPTREERDGIRARFPA CCCCHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCEEECCC GQFIEVHVSTPLSVCEQRDPKGLYVKARSGEISNFTGISSPYEAPLAAELTIDTSKGDLA CCEEEEEECCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHH TQVRALIDYLTAINVINTDKTKTVA HHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TNIVWHQHPVDQAARAEQKGQNPVLLWFTGLSGAGKSTLAGALERALFEAGFHTYLLDG CCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECC DNVRHGLCKDLGFTVEDRDENLRRVGEVAKLMVDAGLVVLSAFISPTREERDGIRARFPA CCCCHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCEEECCC GQFIEVHVSTPLSVCEQRDPKGLYVKARSGEISNFTGISSPYEAPLAAELTIDTSKGDLA CCEEEEEECCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHH TQVRALIDYLTAINVINTDKTKTVA HHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA