Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597715

Identifier: 120597715

GI number: 120597715

Start: 1005438

End: 1007174

Strand: Direct

Name: 120597715

Synonym: Sputw3181_0885

Alternate gene names: NA

Gene position: 1005438-1007174 (Clockwise)

Preceding gene: 120597714

Following gene: 120597719

Centisome position: 21.35

GC content: 42.2

Gene sequence:

>1737_bases
ATGAAAAAGATTGTGATAGCTGCGGCAATTATAGCAGCGGGTGCAGGCGCGTATTGGTACACTCAGCATGGAACAAGCTC
TAGTGTCTCTGCAAATCCGTTGCTTGATTATGTGCCTGCTGACACACCGGTGTTTTCAGGCCAATTAAAGCCATTCCCGT
TAAAAGCGTATTTACAGTCTATTTCTGGAAATTATCAGCAATATCCAACGGATGTTTTTGCTGAGTTAGGCGAATTAGAC
AACCCAATGGGCAAGTTTTTTGTCAGCGTTTATCAGCAGTATATGGAAGGAATTAAAGAACCTGCCTTACTGCTTAAAAC
CTTTGGTTTTCCAGATGAAATCAAACCTTATTTTTATACGTTAGGTGCCTTACCTGTCCTTAAAATCGATGTGGATCAAG
TCGCTGCATTTTGGGCTGTTTTAGATAAAGCCGAAAAAGACAGTGGTGTTACCCATGAAATGCGTCAGATTGGTGGTGTT
GATTACCGCGCCTATGCATTATCCGATGAGAGCTCATCTGAAAAGGCGGATCTGCTATTTGCCCATAAAGATGGCATTCT
TACTGTGACTTTTAGTACTTCAGTGACTGAACCTGAATTATTAGAAATGGCATTAGGATTGAAGAAAGCGCCACAATCTT
TGGCTGCATCAGGTATGTTGCAAGAGATCATTAAAACCCACGGTTTTATGGATGATAGCATTAGCTTTATCAACCATGTG
GAAATTGTAAAAGCCTTAACCTCACCCGATAGCAATATGCTTTCTAAGCAGCTAACTAAGTTATTTGCCGATGAAAACAA
CGGTGAAGATCCATTAGCTGAAATAAGAACGCCAGAATGTCGTGCTGAATTAACTGCGATTGCTGGCAATTGGCCACGGA
CAGTTGCTGGTTTAACGGCTTTTTCTGTGACTGAAAAAGAAAGCCATATGGCAGCCTCATTTGTGGTGGAAACGAAAAAC
CAGCCTATCCTTACCGCTTTGCAAAAAATGCGTGGTTTTATCCCTGCTCATTTAGCGAATATTGATAGCACTATTTTCTC
TCTTGGACTGGGTTTTGATGTTAACGAAGTTGCACCATCACTGACTGCCGTGTGGGATGATTTACAAAAACCGCAATTAA
CATGCGCACCATTGGCCGATTTGCAAGCTGAACTGAGCCAACAAAGCCCTGCTATGCTAGGTATGTTTACGGGGATGGCG
AATGGCGTAAAAGGCATGAGTGTTTCATTACTCGATTACAAAATGGGGACGCAAGAGTCTGAACCTCAGCTAGAGAGTTT
AGATGCCTTAGTGAGTTTAAGTGCCGATAATCCCGCAATGTTATTTAATATGGTGAAGCCATTTGCGCCTATGTTGGCAG
AGGTTCAACTTGCTGAGAATGGTGATGCTACTGATTTATCCCCATTACTGATGTTGCCACCTGAATTAGGCATTAAGCCA
ATGTTGGCCATCAAAGGTCAGCATTTAGTGGTTTATAGTGGTGATAAAGGCTTGGCGCTTGCAAACAAATTGGCGAGTGA
AAAATTGTCGGCCAATGGCATGTATAGCCTTTCAGCAGACTATGGCAAGATGTTTACGCCGGTCATTACGCTGTTAGAAA
TGAGTGGTGAGCCAATCCCTGAAGAAGTGCAAATGCTAAAAGATTACAATATGCGGATTCAAATGAGTTTTGACGTGAAT
AAGCAGGGAATCGTTTTAGGTTCTGTCGTTAATTCAAAGACCAGCGATAACAAGTAA

Upstream 100 bases:

>100_bases
TTTTACATTGCCTTTATCGAACAGGTGTAAACGTGAATGTGCTTTTAAATACCTAAGGGTATTACTGACAAAATTATATG
TACTTAAATGGAGTTTTTAG

Downstream 100 bases:

>100_bases
GTCATTACACTCCTAAATGCGTTTGAAAAGTGTCAACGCTATTTAGGACGGGTCAATTGCCATAAAAAAAGCGCCTGATT
AAGGCGCTTTTTTATTTATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 578; Mature: 578

Protein sequence:

>578_residues
MKKIVIAAAIIAAGAGAYWYTQHGTSSSVSANPLLDYVPADTPVFSGQLKPFPLKAYLQSISGNYQQYPTDVFAELGELD
NPMGKFFVSVYQQYMEGIKEPALLLKTFGFPDEIKPYFYTLGALPVLKIDVDQVAAFWAVLDKAEKDSGVTHEMRQIGGV
DYRAYALSDESSSEKADLLFAHKDGILTVTFSTSVTEPELLEMALGLKKAPQSLAASGMLQEIIKTHGFMDDSISFINHV
EIVKALTSPDSNMLSKQLTKLFADENNGEDPLAEIRTPECRAELTAIAGNWPRTVAGLTAFSVTEKESHMAASFVVETKN
QPILTALQKMRGFIPAHLANIDSTIFSLGLGFDVNEVAPSLTAVWDDLQKPQLTCAPLADLQAELSQQSPAMLGMFTGMA
NGVKGMSVSLLDYKMGTQESEPQLESLDALVSLSADNPAMLFNMVKPFAPMLAEVQLAENGDATDLSPLLMLPPELGIKP
MLAIKGQHLVVYSGDKGLALANKLASEKLSANGMYSLSADYGKMFTPVITLLEMSGEPIPEEVQMLKDYNMRIQMSFDVN
KQGIVLGSVVNSKTSDNK

Sequences:

>Translated_578_residues
MKKIVIAAAIIAAGAGAYWYTQHGTSSSVSANPLLDYVPADTPVFSGQLKPFPLKAYLQSISGNYQQYPTDVFAELGELD
NPMGKFFVSVYQQYMEGIKEPALLLKTFGFPDEIKPYFYTLGALPVLKIDVDQVAAFWAVLDKAEKDSGVTHEMRQIGGV
DYRAYALSDESSSEKADLLFAHKDGILTVTFSTSVTEPELLEMALGLKKAPQSLAASGMLQEIIKTHGFMDDSISFINHV
EIVKALTSPDSNMLSKQLTKLFADENNGEDPLAEIRTPECRAELTAIAGNWPRTVAGLTAFSVTEKESHMAASFVVETKN
QPILTALQKMRGFIPAHLANIDSTIFSLGLGFDVNEVAPSLTAVWDDLQKPQLTCAPLADLQAELSQQSPAMLGMFTGMA
NGVKGMSVSLLDYKMGTQESEPQLESLDALVSLSADNPAMLFNMVKPFAPMLAEVQLAENGDATDLSPLLMLPPELGIKP
MLAIKGQHLVVYSGDKGLALANKLASEKLSANGMYSLSADYGKMFTPVITLLEMSGEPIPEEVQMLKDYNMRIQMSFDVN
KQGIVLGSVVNSKTSDNK
>Mature_578_residues
MKKIVIAAAIIAAGAGAYWYTQHGTSSSVSANPLLDYVPADTPVFSGQLKPFPLKAYLQSISGNYQQYPTDVFAELGELD
NPMGKFFVSVYQQYMEGIKEPALLLKTFGFPDEIKPYFYTLGALPVLKIDVDQVAAFWAVLDKAEKDSGVTHEMRQIGGV
DYRAYALSDESSSEKADLLFAHKDGILTVTFSTSVTEPELLEMALGLKKAPQSLAASGMLQEIIKTHGFMDDSISFINHV
EIVKALTSPDSNMLSKQLTKLFADENNGEDPLAEIRTPECRAELTAIAGNWPRTVAGLTAFSVTEKESHMAASFVVETKN
QPILTALQKMRGFIPAHLANIDSTIFSLGLGFDVNEVAPSLTAVWDDLQKPQLTCAPLADLQAELSQQSPAMLGMFTGMA
NGVKGMSVSLLDYKMGTQESEPQLESLDALVSLSADNPAMLFNMVKPFAPMLAEVQLAENGDATDLSPLLMLPPELGIKP
MLAIKGQHLVVYSGDKGLALANKLASEKLSANGMYSLSADYGKMFTPVITLLEMSGEPIPEEVQMLKDYNMRIQMSFDVN
KQGIVLGSVVNSKTSDNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62673; Mature: 62673

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIVIAAAIIAAGAGAYWYTQHGTSSSVSANPLLDYVPADTPVFSGQLKPFPLKAYLQS
CCHHEEEHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
ISGNYQQYPTDVFAELGELDNPMGKFFVSVYQQYMEGIKEPALLLKTFGFPDEIKPYFYT
HCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHH
LGALPVLKIDVDQVAAFWAVLDKAEKDSGVTHEMRQIGGVDYRAYALSDESSSEKADLLF
HCCCEEEEECHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCEEEE
AHKDGILTVTFSTSVTEPELLEMALGLKKAPQSLAASGMLQEIIKTHGFMDDSISFINHV
EECCCEEEEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
EIVKALTSPDSNMLSKQLTKLFADENNGEDPLAEIRTPECRAELTAIAGNWPRTVAGLTA
HHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHCCCCCHHHHHHEH
FSVTEKESHMAASFVVETKNQPILTALQKMRGFIPAHLANIDSTIFSLGLGFDVNEVAPS
EEECCHHHHHEEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHH
LTAVWDDLQKPQLTCAPLADLQAELSQQSPAMLGMFTGMANGVKGMSVSLLDYKMGTQES
HHHHHHHHCCCCEEECCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCC
EPQLESLDALVSLSADNPAMLFNMVKPFAPMLAEVQLAENGDATDLSPLLMLPPELGIKP
CCHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEECCCCCCCCC
MLAIKGQHLVVYSGDKGLALANKLASEKLSANGMYSLSADYGKMFTPVITLLEMSGEPIP
EEEECCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHCCCCCH
EEVQMLKDYNMRIQMSFDVNKQGIVLGSVVNSKTSDNK
HHHHHHHCCCEEEEEEECCCCCCEEEEEECCCCCCCCC
>Mature Secondary Structure
MKKIVIAAAIIAAGAGAYWYTQHGTSSSVSANPLLDYVPADTPVFSGQLKPFPLKAYLQS
CCHHEEEHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
ISGNYQQYPTDVFAELGELDNPMGKFFVSVYQQYMEGIKEPALLLKTFGFPDEIKPYFYT
HCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHH
LGALPVLKIDVDQVAAFWAVLDKAEKDSGVTHEMRQIGGVDYRAYALSDESSSEKADLLF
HCCCEEEEECHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCEEEE
AHKDGILTVTFSTSVTEPELLEMALGLKKAPQSLAASGMLQEIIKTHGFMDDSISFINHV
EECCCEEEEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
EIVKALTSPDSNMLSKQLTKLFADENNGEDPLAEIRTPECRAELTAIAGNWPRTVAGLTA
HHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHCCCCCHHHHHHEH
FSVTEKESHMAASFVVETKNQPILTALQKMRGFIPAHLANIDSTIFSLGLGFDVNEVAPS
EEECCHHHHHEEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHH
LTAVWDDLQKPQLTCAPLADLQAELSQQSPAMLGMFTGMANGVKGMSVSLLDYKMGTQES
HHHHHHHHCCCCEEECCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCC
EPQLESLDALVSLSADNPAMLFNMVKPFAPMLAEVQLAENGDATDLSPLLMLPPELGIKP
CCHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEECCCCCCCCC
MLAIKGQHLVVYSGDKGLALANKLASEKLSANGMYSLSADYGKMFTPVITLLEMSGEPIP
EEEECCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHCCCCCH
EEVQMLKDYNMRIQMSFDVNKQGIVLGSVVNSKTSDNK
HHHHHHHCCCEEEEEEECCCCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA