Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597696

Identifier: 120597696

GI number: 120597696

Start: 977879

End: 978649

Strand: Direct

Name: 120597696

Synonym: Sputw3181_0866

Alternate gene names: NA

Gene position: 977879-978649 (Clockwise)

Preceding gene: 120597695

Following gene: 120597697

Centisome position: 20.77

GC content: 48.9

Gene sequence:

>771_bases
ATGTTACCGATTAAGTCGGCTCTTTGTTCGCGTTGCTCGTGCCTTTGCGCGGGTGTGATGATGGCGTTATCTTCACTCTC
TATGGGCGCGCTTGCCAGCACTGAGGCTCAAGGGGGCAATGCCTCTTGGCAGAGCCAAGGGAGTGTGATGCTTACCAGTG
ATTATGCGTTTCGCGGTATTTCTCAAACCGATGAAGGACCAGCAGTTCAAGCAGGGTATACCTTAAGCCATGATTCTGGC
TGGTATGGCTCGCTTTGGGGCAGTAACATCGAATTTGGAGATGGAAGTTTAGAACTCGACTTGTCCGCTGGCTGGGCCAA
GGATTGGGATAATGGCTTAACAACGGACCTAGGCGTGATACGTTATCAATACTCGCAGGACGATACCGACCTGAGTTATA
ACGAAATTTATGCTGTGGTAAGCTACGCCGATGCTAAGTTAGGGTTGGTTTATTCTCCTGATTATTTCGGCGAGAATGTG
GACGATTTTCAGTATGTCTACGTAAGCTATGAGCCGCAACTGTTCTCTAATGTAAGCCTCGCTCTGCATCTTGGGAGTAA
TTTTTTTGCGTCCCAGCAAGATATGGCGCAGTTCTTAGGCTCTATGGTCGCAGACAATAACCACTATTGGGATTGGCGAG
TGGGGCTGAACCTCAATATGACTGAGCAGGATGTGTTGAGTGTCGGTTATGTCGATACGGATTTATCGCAGAGTCAGTGC
CAGTCCCTGTGTGATGCGCGCTGGCTAGTGAGTCTTTCAAGGAGTTTCTAA

Upstream 100 bases:

>100_bases
CAAGCGCGCGTCAATGTGCTCAAACTCAACCTCGCTCTCGACCAGATGGCTAAACACGCTCAATAAAACAATATTCTACT
GAATTTAAGGATACATTTTT

Downstream 100 bases:

>100_bases
TCGTGGTTCCAATCAGTCAAACACAGCAAGCCAATGCGCTCTTAAGTCAGATACAGCAAAATGATAAAGGTAAACTGACG
GTTTTTCTTGGGGCGGCACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MLPIKSALCSRCSCLCAGVMMALSSLSMGALASTEAQGGNASWQSQGSVMLTSDYAFRGISQTDEGPAVQAGYTLSHDSG
WYGSLWGSNIEFGDGSLELDLSAGWAKDWDNGLTTDLGVIRYQYSQDDTDLSYNEIYAVVSYADAKLGLVYSPDYFGENV
DDFQYVYVSYEPQLFSNVSLALHLGSNFFASQQDMAQFLGSMVADNNHYWDWRVGLNLNMTEQDVLSVGYVDTDLSQSQC
QSLCDARWLVSLSRSF

Sequences:

>Translated_256_residues
MLPIKSALCSRCSCLCAGVMMALSSLSMGALASTEAQGGNASWQSQGSVMLTSDYAFRGISQTDEGPAVQAGYTLSHDSG
WYGSLWGSNIEFGDGSLELDLSAGWAKDWDNGLTTDLGVIRYQYSQDDTDLSYNEIYAVVSYADAKLGLVYSPDYFGENV
DDFQYVYVSYEPQLFSNVSLALHLGSNFFASQQDMAQFLGSMVADNNHYWDWRVGLNLNMTEQDVLSVGYVDTDLSQSQC
QSLCDARWLVSLSRSF
>Mature_256_residues
MLPIKSALCSRCSCLCAGVMMALSSLSMGALASTEAQGGNASWQSQGSVMLTSDYAFRGISQTDEGPAVQAGYTLSHDSG
WYGSLWGSNIEFGDGSLELDLSAGWAKDWDNGLTTDLGVIRYQYSQDDTDLSYNEIYAVVSYADAKLGLVYSPDYFGENV
DDFQYVYVSYEPQLFSNVSLALHLGSNFFASQQDMAQFLGSMVADNNHYWDWRVGLNLNMTEQDVLSVGYVDTDLSQSQC
QSLCDARWLVSLSRSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28107; Mature: 28107

Theoretical pI: Translated: 3.80; Mature: 3.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPIKSALCSRCSCLCAGVMMALSSLSMGALASTEAQGGNASWQSQGSVMLTSDYAFRGI
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEECCC
SQTDEGPAVQAGYTLSHDSGWYGSLWGSNIEFGDGSLELDLSAGWAKDWDNGLTTDLGVI
CCCCCCCCEEECEEECCCCCCEECCCCCCEEECCCCEEEEECCCCCCCCCCCCCCCEEEE
RYQYSQDDTDLSYNEIYAVVSYADAKLGLVYSPDYFGENVDDFQYVYVSYEPQLFSNVSL
EEEECCCCCCCCHHHEEEEEEECCCEEEEEECCHHCCCCCCCEEEEEEEECCHHHCCEEE
ALHLGSNFFASQQDMAQFLGSMVADNNHYWDWRVGLNLNMTEQDVLSVGYVDTDLSQSQC
EEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHEECCCCCCCCHHHH
QSLCDARWLVSLSRSF
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLPIKSALCSRCSCLCAGVMMALSSLSMGALASTEAQGGNASWQSQGSVMLTSDYAFRGI
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEECCC
SQTDEGPAVQAGYTLSHDSGWYGSLWGSNIEFGDGSLELDLSAGWAKDWDNGLTTDLGVI
CCCCCCCCEEECEEECCCCCCEECCCCCCEEECCCCEEEEECCCCCCCCCCCCCCCEEEE
RYQYSQDDTDLSYNEIYAVVSYADAKLGLVYSPDYFGENVDDFQYVYVSYEPQLFSNVSL
EEEECCCCCCCCHHHEEEEEEECCCEEEEEECCHHCCCCCCCEEEEEEEECCHHHCCEEE
ALHLGSNFFASQQDMAQFLGSMVADNNHYWDWRVGLNLNMTEQDVLSVGYVDTDLSQSQC
EEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHEECCCCCCCCHHHH
QSLCDARWLVSLSRSF
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA