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The map label for this gene is yaaJ [C]

Identifier: 120597631

GI number: 120597631

Start: 899727

End: 901085

Strand: Direct

Name: yaaJ [C]

Synonym: Sputw3181_0800

Alternate gene names: 120597631

Gene position: 899727-901085 (Clockwise)

Preceding gene: 120597622

Following gene: 120597632

Centisome position: 19.11

GC content: 48.34

Gene sequence:

>1359_bases
ATGAGTTTTGAAGTCTTGCTCAGCAGCCTAAACGGTATTGTATGGGGTCCTATCACACTTTGTTTATTAGTTGGCACAGG
GATTTATCTCACTGCGCGGCTAAAGCTTATCCAAGTTTTTCGTTTGCCTATGGCGCTCGGACTATTATTTAAACCCGCCA
AAGGCCATGGTGATTTATCCTCCTTCGCCGCACTCTGTACTGCGTTATCAGCCACGATTGGTACCGGTAATATTGTTGGC
GTGGCGACGGCGATCAAAATGGGAGGGCCTGGGGCCTTATTTTGGATGTGGTTGGCGGCCTTTTTTGGTATGGCGACTAA
ATATGCCGAGTGTATGTTGGCGGTAAAATATCGAACAACCGATGCGAGAGGTCAGATAGCAGGTGGCCCAATGTACTATA
TCGAGCGTGGCCTTGGTCTGCATTGGATGGCAAAGTTATTTGCACTTTTTGGCGTTGGCGTAGCGTTTTTTGGTATTGGC
ACTTTTGCACAGGTGAATGCCATCAGCGATGCGCTGACGATTGCCTTTGAGGTGCCGACTTGGTTAACGGCTGTGGTGTT
AACTATGCTGGTTGCGGCTGTCACGTTAGGGGGCGTTAAGCGCATTTCGAATGTGGCACAAAAGCTGGTGCCTGCTATGT
CGATTGGCTATATCCTTGCCTGTTTGTGGATATTGATTAGTTTTGCCGATCAGATTATGCCTGCGCTTGGTCTTGTGATT
GAATCGGCATTTACCCCATTATCTGCGGCGGGCGGATTTTTAGGCGCGACGGTTGCTCAAGCCATTCAAATTGGTATTGC
TCGGGGGGTGTTTTCGAATGAGTCGGGTCTTGGCAGCGCTCCCATTGCAGCAGCTGCGGCAAAAACCAATGAACCAGTAG
AGCAGGGGCTTGTCAGTATGACGGGCACTTTTTTCGACACCATCATCATTTGTACTATGACGGGCTTAGTGCTGATTATT
ACAGGTGTATGGAGCGGTGATACCGCGGGCGCTGCAATGACTAGCGCGGCATTTGCCCTCGGGGGCTCTGCGGTTGTCGG
CCAATATTTAGTGACAATTGCCCTCGTTTGTTTTGCTTTTACGACCATTTTAGGTTGGCATTATTATGGTGAACGCTGCT
GGTACTATCTGGTGGGTGAGCGCGGCTTACGTGTGTATCAAGTGGTTTTTCTTGTCTTAATCGGGGGAGGAGCATTTATC
AAATTAGATGTGATTTGGCTATTAGCCGATACTGTCAATGGCCTAATGGCTATCCCTAATTTGATTGCTATTGTGGGTTT
GCGTCATATCATTATTGCCGAGACTCAACATTACTTTGCGCGAATGCTCCCAAGCCGCAACGTAGAGACTATTTATTAG

Upstream 100 bases:

>100_bases
CAGGTGAAAAAGCGCACTAAGCATGCCATGTGTTTGTGTCTCAGCCATTTCTTTTCCTCCTCCCTTATTAATTTAAGTTG
TTTAATAATTGAGGAATATC

Downstream 100 bases:

>100_bases
TGCTGTTAAAACAATAAATTACTTCACATTATTTTAACGCTAAGGATTGTCGCCTCATGGTTCTTCGTTTACTTTATATA
AGTGCTGTTTAACGACGTGT

Product: amino acid carrier protein

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 452; Mature: 451

Protein sequence:

>452_residues
MSFEVLLSSLNGIVWGPITLCLLVGTGIYLTARLKLIQVFRLPMALGLLFKPAKGHGDLSSFAALCTALSATIGTGNIVG
VATAIKMGGPGALFWMWLAAFFGMATKYAECMLAVKYRTTDARGQIAGGPMYYIERGLGLHWMAKLFALFGVGVAFFGIG
TFAQVNAISDALTIAFEVPTWLTAVVLTMLVAAVTLGGVKRISNVAQKLVPAMSIGYILACLWILISFADQIMPALGLVI
ESAFTPLSAAGGFLGATVAQAIQIGIARGVFSNESGLGSAPIAAAAAKTNEPVEQGLVSMTGTFFDTIIICTMTGLVLII
TGVWSGDTAGAAMTSAAFALGGSAVVGQYLVTIALVCFAFTTILGWHYYGERCWYYLVGERGLRVYQVVFLVLIGGGAFI
KLDVIWLLADTVNGLMAIPNLIAIVGLRHIIIAETQHYFARMLPSRNVETIY

Sequences:

>Translated_452_residues
MSFEVLLSSLNGIVWGPITLCLLVGTGIYLTARLKLIQVFRLPMALGLLFKPAKGHGDLSSFAALCTALSATIGTGNIVG
VATAIKMGGPGALFWMWLAAFFGMATKYAECMLAVKYRTTDARGQIAGGPMYYIERGLGLHWMAKLFALFGVGVAFFGIG
TFAQVNAISDALTIAFEVPTWLTAVVLTMLVAAVTLGGVKRISNVAQKLVPAMSIGYILACLWILISFADQIMPALGLVI
ESAFTPLSAAGGFLGATVAQAIQIGIARGVFSNESGLGSAPIAAAAAKTNEPVEQGLVSMTGTFFDTIIICTMTGLVLII
TGVWSGDTAGAAMTSAAFALGGSAVVGQYLVTIALVCFAFTTILGWHYYGERCWYYLVGERGLRVYQVVFLVLIGGGAFI
KLDVIWLLADTVNGLMAIPNLIAIVGLRHIIIAETQHYFARMLPSRNVETIY
>Mature_451_residues
SFEVLLSSLNGIVWGPITLCLLVGTGIYLTARLKLIQVFRLPMALGLLFKPAKGHGDLSSFAALCTALSATIGTGNIVGV
ATAIKMGGPGALFWMWLAAFFGMATKYAECMLAVKYRTTDARGQIAGGPMYYIERGLGLHWMAKLFALFGVGVAFFGIGT
FAQVNAISDALTIAFEVPTWLTAVVLTMLVAAVTLGGVKRISNVAQKLVPAMSIGYILACLWILISFADQIMPALGLVIE
SAFTPLSAAGGFLGATVAQAIQIGIARGVFSNESGLGSAPIAAAAAKTNEPVEQGLVSMTGTFFDTIIICTMTGLVLIIT
GVWSGDTAGAAMTSAAFALGGSAVVGQYLVTIALVCFAFTTILGWHYYGERCWYYLVGERGLRVYQVVFLVLIGGGAFIK
LDVIWLLADTVNGLMAIPNLIAIVGLRHIIIAETQHYFARMLPSRNVETIY

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]

Homologues:

Organism=Escherichia coli, GI1786188, Length=458, Percent_Identity=36.8995633187773, Blast_Score=248, Evalue=7e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001463 [H]

Pfam domain/function: PF01235 Na_Ala_symp [H]

EC number: NA

Molecular weight: Translated: 47787; Mature: 47656

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: PS00873 NA_ALANINE_SYMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFEVLLSSLNGIVWGPITLCLLVGTGIYLTARLKLIQVFRLPMALGLLFKPAKGHGDLS
CCHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
SFAALCTALSATIGTGNIVGVATAIKMGGPGALFWMWLAAFFGMATKYAECMLAVKYRTT
HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECC
DARGQIAGGPMYYIERGLGLHWMAKLFALFGVGVAFFGIGTFAQVNAISDALTIAFEVPT
CCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECHH
WLTAVVLTMLVAAVTLGGVKRISNVAQKLVPAMSIGYILACLWILISFADQIMPALGLVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESAFTPLSAAGGFLGATVAQAIQIGIARGVFSNESGLGSAPIAAAAAKTNEPVEQGLVSM
HHHCCCHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHH
TGTFFDTIIICTMTGLVLIITGVWSGDTAGAAMTSAAFALGGSAVVGQYLVTIALVCFAF
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
TTILGWHYYGERCWYYLVGERGLRVYQVVFLVLIGGGAFIKLDVIWLLADTVNGLMAIPN
HHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHH
LIAIVGLRHIIIAETQHYFARMLPSRNVETIY
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SFEVLLSSLNGIVWGPITLCLLVGTGIYLTARLKLIQVFRLPMALGLLFKPAKGHGDLS
CHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH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HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]