| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is yibF [C]
Identifier: 120597543
GI number: 120597543
Start: 790818
End: 791414
Strand: Direct
Name: yibF [C]
Synonym: Sputw3181_0712
Alternate gene names: 120597543
Gene position: 790818-791414 (Clockwise)
Preceding gene: 120597542
Following gene: 120597545
Centisome position: 16.8
GC content: 43.89
Gene sequence:
>597_bases ATGAAGTTGCTGTGCTCTCAGGCATCCCCCTATGCCCGCTGCGTTAGAACGCTAATTCGTTATTTAAATATTAAGGATAT TGAAGAAGTTACTGTAAACCCCTTTGAGAATACCGCTGAGTTGCTTGATGCCAATCCACTAGGCCAAATCCCGTGTCTTA TCACGAATGATGGTATACCTCTGTATGATAGCGAAGTGATTATGCGTTATTTGGATGCTGAACTTGGCGAACAACATATG TTTGGTGTGCCCAATAGTCATTGGGTATTGCAGTGCCAGTTCTCTATGATAAAAGGATTGATCGATAGCGCGGTAAAATT ACGTCAAGAGCAAATGCGTGAAGATGAAGGTTTGAGATCAGTCTTTTGGACATCGCGATTTGAACAGGCGTTGCTCCGCG GTTTAATGCAGATGGAGCATCAAAGTGTAATCACCCAAGCTACAGTGCAAGCGCCACAGTTAGCCTTAATTTGCCTACTT GATTATATGGACTTTAGACATCCAGAGCTTGATTGGCGAAAAGTTGCACCCGCTACGGCACTTTGGTTTAGTGACATGCG AGATTTACCTGCATTCGTTGAAACTCGTCCTCACTAG
Upstream 100 bases:
>100_bases ATGTCGCTATTTACAAGTGGCCTCAACATACTGATTTAACTAGTATTAAAAGTGTTTTTTTAAGGTAAATGATGATTCCA ACAAGAGAAGGATATTTTTG
Downstream 100 bases:
>100_bases TTTGAAAAGGCTTAGCAATCAGTTACGCGCCTTCCCCTTGGATTGTCACGGCGATTTTGCTCACCAAAAGCGCCGTATAA CTCCCGAGTGACACCGTAAT
Product: glutathione S-transferase domain-containing protein
Products: NA
Alternate protein names: Glutathione S-Transferase; Glutathione S-Transferase Family Protein; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase-Like; Glutathione S-Transferase Protein; Glutathione S-Transferase N-Terminal Domain-Containing; Glutathione S-Transferase Domain; Glutathione S-Transferase C-Terminal Domain-Containing; Glutathione S-Transferase N-Terminal Domain Protein; Glutathione S-Transferase Related Protein; Glutathione Transferase; Glutathione S-Transferase N- Domain; Glutathione S-Transferase With Thioredoxin-Like Domain
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MKLLCSQASPYARCVRTLIRYLNIKDIEEVTVNPFENTAELLDANPLGQIPCLITNDGIPLYDSEVIMRYLDAELGEQHM FGVPNSHWVLQCQFSMIKGLIDSAVKLRQEQMREDEGLRSVFWTSRFEQALLRGLMQMEHQSVITQATVQAPQLALICLL DYMDFRHPELDWRKVAPATALWFSDMRDLPAFVETRPH
Sequences:
>Translated_198_residues MKLLCSQASPYARCVRTLIRYLNIKDIEEVTVNPFENTAELLDANPLGQIPCLITNDGIPLYDSEVIMRYLDAELGEQHM FGVPNSHWVLQCQFSMIKGLIDSAVKLRQEQMREDEGLRSVFWTSRFEQALLRGLMQMEHQSVITQATVQAPQLALICLL DYMDFRHPELDWRKVAPATALWFSDMRDLPAFVETRPH >Mature_198_residues MKLLCSQASPYARCVRTLIRYLNIKDIEEVTVNPFENTAELLDANPLGQIPCLITNDGIPLYDSEVIMRYLDAELGEQHM FGVPNSHWVLQCQFSMIKGLIDSAVKLRQEQMREDEGLRSVFWTSRFEQALLRGLMQMEHQSVITQATVQAPQLALICLL DYMDFRHPELDWRKVAPATALWFSDMRDLPAFVETRPH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22856; Mature: 22856
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLCSQASPYARCVRTLIRYLNIKDIEEVTVNPFENTAELLDANPLGQIPCLITNDGIP CCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHCCCCCCCCCEEEECCCCC LYDSEVIMRYLDAELGEQHMFGVPNSHWVLQCQFSMIKGLIDSAVKLRQEQMREDEGLRS CCHHHHHHHHHHHHHCCHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFWTSRFEQALLRGLMQMEHQSVITQATVQAPQLALICLLDYMDFRHPELDWRKVAPATA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHCHHHH LWFSDMRDLPAFVETRPH HHHHHHHHCHHHHCCCCC >Mature Secondary Structure MKLLCSQASPYARCVRTLIRYLNIKDIEEVTVNPFENTAELLDANPLGQIPCLITNDGIP CCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHCCCCCCCCCEEEECCCCC LYDSEVIMRYLDAELGEQHMFGVPNSHWVLQCQFSMIKGLIDSAVKLRQEQMREDEGLRS CCHHHHHHHHHHHHHCCHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFWTSRFEQALLRGLMQMEHQSVITQATVQAPQLALICLLDYMDFRHPELDWRKVAPATA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHCHHHH LWFSDMRDLPAFVETRPH HHHHHHHHCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA