| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is 120597541
Identifier: 120597541
GI number: 120597541
Start: 789194
End: 789799
Strand: Direct
Name: 120597541
Synonym: Sputw3181_0710
Alternate gene names: NA
Gene position: 789194-789799 (Clockwise)
Preceding gene: 120597537
Following gene: 120597542
Centisome position: 16.76
GC content: 44.22
Gene sequence:
>606_bases ATGGAAATCAATAAATCCGCTCCGACTCAGCAGAGCACATCTTTGCCCCATAAAAATGTCCCTAAAGATAACGAGGCGAG TGAATCTAAAGCGGCAGCAGCCCCCTCTAAGCTCACGGCACAACAGACAAGTAAGAATCTGATGAATCAGGCCATTTTAT CCGCACAGCAGGATGTGAATATCAAGGCTGGTGATAAGTCTATGGTCTTACTCTATCGCGCAGCAATCGAGGCGATAAAC AAAGAGTTAGCACCGAGCATGGGTGAGAATGCCATTCAAACGGCTTATGACAATGGCGTTGACACTTCGCCAGAGGCGAC GGCCGATCGCATTGTTAGCTTTGCAACGCAGTTTTTTAGTATCCACCAGCAGCAGAACTCAAGAATGAGTTTCGATGAAC AGCTCGATAGTTTTATGACCATTATTGGTGGCGCTATAGATAGTGGTTTTAAGGATGCAAGAGAGATTTTATCAGGTCTT AAAGTGCTGCAAGGCGATATTGCTGATGGCGTTGATAAAACTTATTCTCTGGTACAAGAGGGCTTACAAGCTTTTAGAGA TAGCTTTAATAAGAAAAACGATAACAGTCAGACTGCTGCCACATAA
Upstream 100 bases:
>100_bases ATAGCGTTACGGCTTGATAATAGTGTAATTTTAAAAATTACTAAAGTTGTTCAAATTTTGGTCGATAATTAGGTCGACCC GAATTGAATGGATAGCTACC
Downstream 100 bases:
>100_bases TGCCAATAGCTTTTGCATTTAACTTACCCTAAACCCCTTTATTAAAAGGGGTTTTTTATTAACAGCGAATCATAGTGTTG TTTAAATCTCCCTATTCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MEINKSAPTQQSTSLPHKNVPKDNEASESKAAAAPSKLTAQQTSKNLMNQAILSAQQDVNIKAGDKSMVLLYRAAIEAIN KELAPSMGENAIQTAYDNGVDTSPEATADRIVSFATQFFSIHQQQNSRMSFDEQLDSFMTIIGGAIDSGFKDAREILSGL KVLQGDIADGVDKTYSLVQEGLQAFRDSFNKKNDNSQTAAT
Sequences:
>Translated_201_residues MEINKSAPTQQSTSLPHKNVPKDNEASESKAAAAPSKLTAQQTSKNLMNQAILSAQQDVNIKAGDKSMVLLYRAAIEAIN KELAPSMGENAIQTAYDNGVDTSPEATADRIVSFATQFFSIHQQQNSRMSFDEQLDSFMTIIGGAIDSGFKDAREILSGL KVLQGDIADGVDKTYSLVQEGLQAFRDSFNKKNDNSQTAAT >Mature_201_residues MEINKSAPTQQSTSLPHKNVPKDNEASESKAAAAPSKLTAQQTSKNLMNQAILSAQQDVNIKAGDKSMVLLYRAAIEAIN KELAPSMGENAIQTAYDNGVDTSPEATADRIVSFATQFFSIHQQQNSRMSFDEQLDSFMTIIGGAIDSGFKDAREILSGL KVLQGDIADGVDKTYSLVQEGLQAFRDSFNKKNDNSQTAAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21708; Mature: 21708
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEINKSAPTQQSTSLPHKNVPKDNEASESKAAAAPSKLTAQQTSKNLMNQAILSAQQDVN CCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC IKAGDKSMVLLYRAAIEAINKELAPSMGENAIQTAYDNGVDTSPEATADRIVSFATQFFS EECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH IHQQQNSRMSFDEQLDSFMTIIGGAIDSGFKDAREILSGLKVLQGDIADGVDKTYSLVQE HHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLQAFRDSFNKKNDNSQTAAT HHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MEINKSAPTQQSTSLPHKNVPKDNEASESKAAAAPSKLTAQQTSKNLMNQAILSAQQDVN CCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC IKAGDKSMVLLYRAAIEAINKELAPSMGENAIQTAYDNGVDTSPEATADRIVSFATQFFS EECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH IHQQQNSRMSFDEQLDSFMTIIGGAIDSGFKDAREILSGLKVLQGDIADGVDKTYSLVQE HHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLQAFRDSFNKKNDNSQTAAT HHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA