Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597533

Identifier: 120597533

GI number: 120597533

Start: 782010

End: 782339

Strand: Direct

Name: 120597533

Synonym: Sputw3181_0702

Alternate gene names: NA

Gene position: 782010-782339 (Clockwise)

Preceding gene: 120597532

Following gene: 120597534

Centisome position: 16.61

GC content: 44.55

Gene sequence:

>330_bases
ATGAATTTGATTGCAAATATTGTGCAACGCTATGTCTTACTGAGCCTTATCACCCTATTCGTTATGCCTGTGATGGCGGG
TCAAGTGGTCGTGACGCGTTCGAGTGAGCCATTTGACGCCTTTGCTGTGCGAGATCAAGTGCTTAAAGACTTTGAGTGGC
AAGAATCGCTTCGTCGACAGGAGCAGATCCAAATTTTACAGGCTCTGCCTATTGGCTGTGTGTTGATGACAAAACCCTAT
CGCCATTTTTCCTGTGGTGAGAGTACATATCGACCCTATCAGTATCAGCAGCGAGAGCTATATATTAAAGTGGATTCCCC
TAAAAAATAA

Upstream 100 bases:

>100_bases
TGCTTTTTTATGGGTAATCCAAGCCAAGTGTGAGGCTTTTTAAATTTTACAGAGTAAGAAGTGTGATAAATCATGCAGCG
ATAAATTTAAGGAGTGACTG

Downstream 100 bases:

>100_bases
TGGCTTTTAGCTGAGTGATTTCATTGTTCAATACCTTAAAAGACTTCACCTGTGGATCCACCGCCTTATTCGATTTTACT
CACCATGACTGTGATTTATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MNLIANIVQRYVLLSLITLFVMPVMAGQVVVTRSSEPFDAFAVRDQVLKDFEWQESLRRQEQIQILQALPIGCVLMTKPY
RHFSCGESTYRPYQYQQRELYIKVDSPKK

Sequences:

>Translated_109_residues
MNLIANIVQRYVLLSLITLFVMPVMAGQVVVTRSSEPFDAFAVRDQVLKDFEWQESLRRQEQIQILQALPIGCVLMTKPY
RHFSCGESTYRPYQYQQRELYIKVDSPKK
>Mature_109_residues
MNLIANIVQRYVLLSLITLFVMPVMAGQVVVTRSSEPFDAFAVRDQVLKDFEWQESLRRQEQIQILQALPIGCVLMTKPY
RHFSCGESTYRPYQYQQRELYIKVDSPKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12801; Mature: 12801

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLIANIVQRYVLLSLITLFVMPVMAGQVVVTRSSEPFDAFAVRDQVLKDFEWQESLRRQ
CCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHH
EQIQILQALPIGCVLMTKPYRHFSCGESTYRPYQYQQRELYIKVDSPKK
HHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC
>Mature Secondary Structure
MNLIANIVQRYVLLSLITLFVMPVMAGQVVVTRSSEPFDAFAVRDQVLKDFEWQESLRRQ
CCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHH
EQIQILQALPIGCVLMTKPYRHFSCGESTYRPYQYQQRELYIKVDSPKK
HHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA