Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597504

Identifier: 120597504

GI number: 120597504

Start: 741264

End: 742541

Strand: Direct

Name: 120597504

Synonym: Sputw3181_0673

Alternate gene names: NA

Gene position: 741264-742541 (Clockwise)

Preceding gene: 120597502

Following gene: 120597505

Centisome position: 15.74

GC content: 47.97

Gene sequence:

>1278_bases
GTGATTCGAGCAAAAAAATCAATTACACAGGTATTTTCGATAGCCTTGTTTGCCATGCTCAGTGGCATACTTTCTGGCTG
TGGCGGAGATGACGCAGGAGCTAATCCTTCACCAGAGCAACCGGATAATGGTGGTGGCGTTACTCGGGTCACCATCAGTT
CGGTCGCCTCAGAGGGCGGCTCGATATTGCCCGCACAGCTTGAACTCAACAAAGGCGGTTCAGCCAGCTTTGTTATTAGC
GCCAACCCAGGCTATTCCATCGACCAGATCACTGGCTGTGATGGTGAGCGACAAGGCGATAGTTATCAGGTTAAAAATGT
GCAGCAAAGTTGCCAAATTACTCCCACTTTTACGCGTAATCGCTATCAAATAGATACAAAGATCACGGGCAACGGCCAGA
TTATTCCGACGCAATTGCAGCTAGAGTATGGTCAGCAAGGGCAATTTACTCTCACCCCACAAACGGGTTTTGTCATCGCC
AATGTGACGGGATGCGAGGGCAACTTAAGCGGTAATACTTATACCAGCTCACCAGTGACGAGTGCTTGTACGGTTAACGC
TAGCTTTACCCCTGTTGCTTATACCGTTACCGCCAGTGCGAGTGAAGGTGGGATTATTTCGCCTGAAAGCCAACTGGTAA
ACCATGGTCAAAGCGCATCCTTTACCCTTACGCCTAATGCAGGTTATCGAGTCGATACCGTGAGTGGCTGCGATGGCACC
TTAAAGGAGAATACCTATGTTATACAAAGTGGCTCGGCTGATTGCAGCATAAAAGCCCATTTTGCATTAGCGGCAAATTT
CACCAATGTACAGATAGGTACTCAAGCCTTAAGCCCTGAGCAACAGCAACAACCCTTGTTTTTAGTAAACGATGCCTACG
CCAAATCCCTCGATAAAAACCTAGCCGAAGCAAGTATCGCCACGTTACCCGAGCAAAATCAATTGTTAACGCTAATTGAT
CAAACTGGCGAGCCCTTAATGCTAGGGCTAAAACTCGCCAATGAACCAACCACTGAGGTGACGGTAGAAAGCAGTGCAGT
GGTATTTGTGTTAAGCAGCAACCATTTTTACGGTGCTGATTTTACCGACCGAGCAGAACTCAACCGCCGTATACGCGCGC
ATCAAACCTTCCCGCAATTAGTGAGTGAGCTTAGCGAGCAGTTACAAAACGGTAATCCTTGCCCAATGGATAGAAGCTGT
AGCGCAGTGGCGGCGATCATTTCTGAGCGCATTGCCAGTTCTTTAAATGTTGATGGTTTATTGGTGGCGGGAGAATAA

Upstream 100 bases:

>100_bases
GAGACCGCTATTTCAATGCTCAATGGGCTGTTGAGTATCACGATAGCACTTGGTGGATTTTGGCTTGGCAATAACAGATA
AAGCAGAAAAGGGAATAACC

Downstream 100 bases:

>100_bases
GGATGAAAGGGTTTAAACTCAAAGTCGCAGCCAGTATGTGTATGTTTGCCATCACCATGGCAATGGGAAGTGCACAAGCG
CAAACGCAGTACCGTTTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MIRAKKSITQVFSIALFAMLSGILSGCGGDDAGANPSPEQPDNGGGVTRVTISSVASEGGSILPAQLELNKGGSASFVIS
ANPGYSIDQITGCDGERQGDSYQVKNVQQSCQITPTFTRNRYQIDTKITGNGQIIPTQLQLEYGQQGQFTLTPQTGFVIA
NVTGCEGNLSGNTYTSSPVTSACTVNASFTPVAYTVTASASEGGIISPESQLVNHGQSASFTLTPNAGYRVDTVSGCDGT
LKENTYVIQSGSADCSIKAHFALAANFTNVQIGTQALSPEQQQQPLFLVNDAYAKSLDKNLAEASIATLPEQNQLLTLID
QTGEPLMLGLKLANEPTTEVTVESSAVVFVLSSNHFYGADFTDRAELNRRIRAHQTFPQLVSELSEQLQNGNPCPMDRSC
SAVAAIISERIASSLNVDGLLVAGE

Sequences:

>Translated_425_residues
MIRAKKSITQVFSIALFAMLSGILSGCGGDDAGANPSPEQPDNGGGVTRVTISSVASEGGSILPAQLELNKGGSASFVIS
ANPGYSIDQITGCDGERQGDSYQVKNVQQSCQITPTFTRNRYQIDTKITGNGQIIPTQLQLEYGQQGQFTLTPQTGFVIA
NVTGCEGNLSGNTYTSSPVTSACTVNASFTPVAYTVTASASEGGIISPESQLVNHGQSASFTLTPNAGYRVDTVSGCDGT
LKENTYVIQSGSADCSIKAHFALAANFTNVQIGTQALSPEQQQQPLFLVNDAYAKSLDKNLAEASIATLPEQNQLLTLID
QTGEPLMLGLKLANEPTTEVTVESSAVVFVLSSNHFYGADFTDRAELNRRIRAHQTFPQLVSELSEQLQNGNPCPMDRSC
SAVAAIISERIASSLNVDGLLVAGE
>Mature_425_residues
MIRAKKSITQVFSIALFAMLSGILSGCGGDDAGANPSPEQPDNGGGVTRVTISSVASEGGSILPAQLELNKGGSASFVIS
ANPGYSIDQITGCDGERQGDSYQVKNVQQSCQITPTFTRNRYQIDTKITGNGQIIPTQLQLEYGQQGQFTLTPQTGFVIA
NVTGCEGNLSGNTYTSSPVTSACTVNASFTPVAYTVTASASEGGIISPESQLVNHGQSASFTLTPNAGYRVDTVSGCDGT
LKENTYVIQSGSADCSIKAHFALAANFTNVQIGTQALSPEQQQQPLFLVNDAYAKSLDKNLAEASIATLPEQNQLLTLID
QTGEPLMLGLKLANEPTTEVTVESSAVVFVLSSNHFYGADFTDRAELNRRIRAHQTFPQLVSELSEQLQNGNPCPMDRSC
SAVAAIISERIASSLNVDGLLVAGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44725; Mature: 44725

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRAKKSITQVFSIALFAMLSGILSGCGGDDAGANPSPEQPDNGGGVTRVTISSVASEGG
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHCCCC
SILPAQLELNKGGSASFVISANPGYSIDQITGCDGERQGDSYQVKNVQQSCQITPTFTRN
CEEEEEEEECCCCCEEEEEECCCCCCCCEEECCCCCCCCCCEEECCHHHHCEECEEECCC
RYQIDTKITGNGQIIPTQLQLEYGQQGQFTLTPQTGFVIANVTGCEGNLSGNTYTSSPVT
EEEEEEEECCCCCEEEEEEEEEECCCCCEEECCCCCEEEEEEECCCCCCCCCEEECCCCC
SACTVNASFTPVAYTVTASASEGGIISPESQLVNHGQSASFTLTPNAGYRVDTVSGCDGT
CEEEECCCCCCEEEEEEECCCCCCEECCHHHHHHCCCCCEEEECCCCCEEEEEECCCCCC
LKENTYVIQSGSADCSIKAHFALAANFTNVQIGTQALSPEQQQQPLFLVNDAYAKSLDKN
CCCCEEEEECCCCCEEEEEEEEEEECCEEEEECCHHCCCHHHCCCEEEEEHHHHHHHHHH
LAEASIATLPEQNQLLTLIDQTGEPLMLGLKLANEPTTEVTVESSAVVFVLSSNHFYGAD
HHHHHHHCCCCCCCEEEEEECCCCCEEEEEEECCCCCCEEEEECCEEEEEEECCEEECCC
FTDRAELNRRIRAHQTFPQLVSELSEQLQNGNPCPMDRSCSAVAAIISERIASSLNVDGL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEE
LVAGE
EEECC
>Mature Secondary Structure
MIRAKKSITQVFSIALFAMLSGILSGCGGDDAGANPSPEQPDNGGGVTRVTISSVASEGG
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHCCCC
SILPAQLELNKGGSASFVISANPGYSIDQITGCDGERQGDSYQVKNVQQSCQITPTFTRN
CEEEEEEEECCCCCEEEEEECCCCCCCCEEECCCCCCCCCCEEECCHHHHCEECEEECCC
RYQIDTKITGNGQIIPTQLQLEYGQQGQFTLTPQTGFVIANVTGCEGNLSGNTYTSSPVT
EEEEEEEECCCCCEEEEEEEEEECCCCCEEECCCCCEEEEEEECCCCCCCCCEEECCCCC
SACTVNASFTPVAYTVTASASEGGIISPESQLVNHGQSASFTLTPNAGYRVDTVSGCDGT
CEEEECCCCCCEEEEEEECCCCCCEECCHHHHHHCCCCCEEEECCCCCEEEEEECCCCCC
LKENTYVIQSGSADCSIKAHFALAANFTNVQIGTQALSPEQQQQPLFLVNDAYAKSLDKN
CCCCEEEEECCCCCEEEEEEEEEEECCEEEEECCHHCCCHHHCCCEEEEEHHHHHHHHHH
LAEASIATLPEQNQLLTLIDQTGEPLMLGLKLANEPTTEVTVESSAVVFVLSSNHFYGAD
HHHHHHHCCCCCCCEEEEEECCCCCEEEEEEECCCCCCEEEEECCEEEEEEECCEEECCC
FTDRAELNRRIRAHQTFPQLVSELSEQLQNGNPCPMDRSCSAVAAIISERIASSLNVDGL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEE
LVAGE
EEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA