Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is ylaK [H]

Identifier: 120597471

GI number: 120597471

Start: 698867

End: 700261

Strand: Direct

Name: ylaK [H]

Synonym: Sputw3181_0640

Alternate gene names: 120597471

Gene position: 698867-700261 (Clockwise)

Preceding gene: 120597468

Following gene: 120597472

Centisome position: 14.84

GC content: 45.09

Gene sequence:

>1395_bases
ATGGAACAAGACGACAGAAAGTTGTTTGTACTGGATACCAATGTGTTACTGCATGAACCTTTGGCGATCTATTCGTTTAA
AGAGCACGATGTGGTCATTCCGATGACAGTGCTAGAAGAGCTAGACCAGATAAAAGATCGAAAGAGTGATGTGAGTCGGG
ATGCTAGGGTGGCCATCAGGGCGTTGGAGGATACCCTAGGAGGTGATACCACACCTGAGCAGATTATTAATGGTGTACCA
CTGCCGAGTCGAGAGGGTCATGCCGATGCGATAGGAGCGCTCTCTATTTTCCCCGATCACCTTGTTGATTTTACCTTAGG
CAGCTTGCCGGGGGATGGAAATGACAACCGCATTATCAACACTGCACTTCACCTACAAAACCTCCACCATCCACGTACCG
TCGTATTAGTCACTAAAGACATCAATATGCGCCTTAAAGCCAAAGGTGCTGGCATTCAATTAGTGGAAGATTACCGTACC
GACCAGTTGATTGATGATATTCGCTTCCTCAGTAAAGGTTTTTACCAATTTGAAGGCAATTTTTGGGAACATTTAAATAA
AGTTTCTACCGAGCGCCATGGCAGACATATTATCCATGAAGTGCCACTTAAGGATCTGGAAAACGATCAATTTTATATTA
ACCAATACCTTATCGATACAGAGTCGGATTTTTGTGGCCGAGTCACGGGGCGCACCGACACGCACCTACATATTTTAGAT
TTAGGTCGTGAGCGGATGAAAAACCTTGAGGCTTGGGGGGTTAAACCGAAAAATGTCTATCAAGGCATGGCATTACAGGC
GCTACTCGATCCCGATATCGAACTCGTGATTTTAACGGGCCCCGCAGGTTGTGGTAAAACCTTGCTTGCTATGGCTGCAG
CCCTTGAGCTTGTGGTTGAGCGTAACCGCTACGACAAGGTGATAGTCACCCGTAACACGCCTGAAATAGCGGAGTCTATT
GGTTTTTTACCCGGCACAGAAGAAGAGAAAATGATGCCGTGGCTCGCCGCCATCACAGATACCTTAGAAGTGCTGCACAA
GAATGATGTGAATCCCACGGGCAGCCTCAATTACATTATGGAAAAGGCCAATATTCAGTTTAAGTCGATTAATTTTATGC
GTGGCCGCTCGATTCAAAACTCAATTGTATTATTGGATGAGTGCCAAAATCTCACAGCTTCGCAGATTAAAACTATGATT
ACCCGTATGGGTGAAGGTACAAAGCTGATTTGTTGCGGTAACTTAGCGCAAATCGATTCTAATTATTTAACTGCCGTTAC
CTCAGGGCTGACCTACATTGTTGAGCGCTTTAAAGACTTTGAAGGTAGTGCTAACTTGTACCTCAATGGGGTTGTACGTT
CACGTTTGGCTGAATATGCCGAAGAACACCTTTAA

Upstream 100 bases:

>100_bases
AAAGATCATTCTAACCTTATCTAAGCTAATGACAGGAGCCATGCAATCTAACGTGAGACAGGATGTAGCGTAGACATCAA
TCAAGCACTATGGAGGCGCC

Downstream 100 bases:

>100_bases
CTGAACCCTTGAATATGACCAAAAGGCCTCGTCTTTGAGGCCTTTGTTTTTCTGCACCCATTTACACTTTTTTAATCGAT
GAATCATGGGCATGGATAGC

Product: PhoH family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 464; Mature: 464

Protein sequence:

>464_residues
MEQDDRKLFVLDTNVLLHEPLAIYSFKEHDVVIPMTVLEELDQIKDRKSDVSRDARVAIRALEDTLGGDTTPEQIINGVP
LPSREGHADAIGALSIFPDHLVDFTLGSLPGDGNDNRIINTALHLQNLHHPRTVVLVTKDINMRLKAKGAGIQLVEDYRT
DQLIDDIRFLSKGFYQFEGNFWEHLNKVSTERHGRHIIHEVPLKDLENDQFYINQYLIDTESDFCGRVTGRTDTHLHILD
LGRERMKNLEAWGVKPKNVYQGMALQALLDPDIELVILTGPAGCGKTLLAMAAALELVVERNRYDKVIVTRNTPEIAESI
GFLPGTEEEKMMPWLAAITDTLEVLHKNDVNPTGSLNYIMEKANIQFKSINFMRGRSIQNSIVLLDECQNLTASQIKTMI
TRMGEGTKLICCGNLAQIDSNYLTAVTSGLTYIVERFKDFEGSANLYLNGVVRSRLAEYAEEHL

Sequences:

>Translated_464_residues
MEQDDRKLFVLDTNVLLHEPLAIYSFKEHDVVIPMTVLEELDQIKDRKSDVSRDARVAIRALEDTLGGDTTPEQIINGVP
LPSREGHADAIGALSIFPDHLVDFTLGSLPGDGNDNRIINTALHLQNLHHPRTVVLVTKDINMRLKAKGAGIQLVEDYRT
DQLIDDIRFLSKGFYQFEGNFWEHLNKVSTERHGRHIIHEVPLKDLENDQFYINQYLIDTESDFCGRVTGRTDTHLHILD
LGRERMKNLEAWGVKPKNVYQGMALQALLDPDIELVILTGPAGCGKTLLAMAAALELVVERNRYDKVIVTRNTPEIAESI
GFLPGTEEEKMMPWLAAITDTLEVLHKNDVNPTGSLNYIMEKANIQFKSINFMRGRSIQNSIVLLDECQNLTASQIKTMI
TRMGEGTKLICCGNLAQIDSNYLTAVTSGLTYIVERFKDFEGSANLYLNGVVRSRLAEYAEEHL
>Mature_464_residues
MEQDDRKLFVLDTNVLLHEPLAIYSFKEHDVVIPMTVLEELDQIKDRKSDVSRDARVAIRALEDTLGGDTTPEQIINGVP
LPSREGHADAIGALSIFPDHLVDFTLGSLPGDGNDNRIINTALHLQNLHHPRTVVLVTKDINMRLKAKGAGIQLVEDYRT
DQLIDDIRFLSKGFYQFEGNFWEHLNKVSTERHGRHIIHEVPLKDLENDQFYINQYLIDTESDFCGRVTGRTDTHLHILD
LGRERMKNLEAWGVKPKNVYQGMALQALLDPDIELVILTGPAGCGKTLLAMAAALELVVERNRYDKVIVTRNTPEIAESI
GFLPGTEEEKMMPWLAAITDTLEVLHKNDVNPTGSLNYIMEKANIQFKSINFMRGRSIQNSIVLLDECQNLTASQIKTMI
TRMGEGTKLICCGNLAQIDSNYLTAVTSGLTYIVERFKDFEGSANLYLNGVVRSRLAEYAEEHL

Specific function: Unknown

COG id: COG1875

COG function: function code T; Predicted ATPase related to phosphate starvation-inducible protein PhoH

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PINc domain [H]

Homologues:

Organism=Escherichia coli, GI1787257, Length=191, Percent_Identity=35.6020942408377, Blast_Score=112, Evalue=5e-26,
Organism=Escherichia coli, GI145693103, Length=189, Percent_Identity=35.4497354497354, Blast_Score=97, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003714
- InterPro:   IPR006596 [H]

Pfam domain/function: PF02562 PhoH [H]

EC number: NA

Molecular weight: Translated: 52249; Mature: 52249

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQDDRKLFVLDTNVLLHEPLAIYSFKEHDVVIPMTVLEELDQIKDRKSDVSRDARVAIR
CCCCCCEEEEEECCCCEECCCEEEEECCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHH
ALEDTLGGDTTPEQIINGVPLPSREGHADAIGALSIFPDHLVDFTLGSLPGDGNDNRIIN
HHHHHCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHCCCCCCCCCCCEEE
TALHLQNLHHPRTVVLVTKDINMRLKAKGAGIQLVEDYRTDQLIDDIRFLSKGFYQFEGN
HHHHHHHCCCCEEEEEEEECCCEEEEECCCCEEEEHHHCHHHHHHHHHHHHCCCEEECCC
FWEHLNKVSTERHGRHIIHEVPLKDLENDQFYINQYLIDTESDFCGRVTGRTDTHLHILD
HHHHHHHHHHHHCCCHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEC
LGRERMKNLEAWGVKPKNVYQGMALQALLDPDIELVILTGPAGCGKTLLAMAAALELVVE
CCHHHHCCHHHCCCCHHHHHHCHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHH
RNRYDKVIVTRNTPEIAESIGFLPGTEEEKMMPWLAAITDTLEVLHKNDVNPTGSLNYIM
CCCCCEEEEECCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEE
EKANIQFKSINFMRGRSIQNSIVLLDECQNLTASQIKTMITRMGEGTKLICCGNLAQIDS
HHCCEEEEEEEECCCCCCCCCEEEEEHHCCCCHHHHHHHHHHCCCCCEEEEECCHHHHCC
NYLTAVTSGLTYIVERFKDFEGSANLYLNGVVRSRLAEYAEEHL
CHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEQDDRKLFVLDTNVLLHEPLAIYSFKEHDVVIPMTVLEELDQIKDRKSDVSRDARVAIR
CCCCCCEEEEEECCCCEECCCEEEEECCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHH
ALEDTLGGDTTPEQIINGVPLPSREGHADAIGALSIFPDHLVDFTLGSLPGDGNDNRIIN
HHHHHCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHCCCCCCCCCCCEEE
TALHLQNLHHPRTVVLVTKDINMRLKAKGAGIQLVEDYRTDQLIDDIRFLSKGFYQFEGN
HHHHHHHCCCCEEEEEEEECCCEEEEECCCCEEEEHHHCHHHHHHHHHHHHCCCEEECCC
FWEHLNKVSTERHGRHIIHEVPLKDLENDQFYINQYLIDTESDFCGRVTGRTDTHLHILD
HHHHHHHHHHHHCCCHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEC
LGRERMKNLEAWGVKPKNVYQGMALQALLDPDIELVILTGPAGCGKTLLAMAAALELVVE
CCHHHHCCHHHCCCCHHHHHHCHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHH
RNRYDKVIVTRNTPEIAESIGFLPGTEEEKMMPWLAAITDTLEVLHKNDVNPTGSLNYIM
CCCCCEEEEECCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEE
EKANIQFKSINFMRGRSIQNSIVLLDECQNLTASQIKTMITRMGEGTKLICCGNLAQIDS
HHCCEEEEEEEECCCCCCCCCEEEEEHHCCCCHHHHHHHHHHCCCCCEEEEECCHHHHCC
NYLTAVTSGLTYIVERFKDFEGSANLYLNGVVRSRLAEYAEEHL
CHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]