| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is 120597276
Identifier: 120597276
GI number: 120597276
Start: 486249
End: 486680
Strand: Direct
Name: 120597276
Synonym: Sputw3181_0445
Alternate gene names: NA
Gene position: 486249-486680 (Clockwise)
Preceding gene: 120597275
Following gene: 120597278
Centisome position: 10.33
GC content: 44.21
Gene sequence:
>432_bases ATGAACATCGAAGCATTGATTGAACAAATAGAGAATACTGACTGGCTAAGCCAAGCTGAGCACATCTTAGCGATTTCTCA ATTACAAATTGAATGGGATTGGTTGCCGAGCAGCAGAGATCAATCCGATCCTTTCGAAGGAACATATCCAACTAAACCAG ACGAACAGCTCTACGACAAAGAGGCTGAGAAAGTGGTTTATAAAGCTGCGTTGAAATCGTTGCGAAGCGTTGGGAAGACT CATCCTAAACTTGTCGATGGCCCTCATAACTACACAGAGGCAATGAAAGGTAGCGCGCTGTTCGCTTGTAGACATGCAGC CAAAGAGGTCCTTTCTAATCAGCCAGGAAAGTGGGTAGCAATCTTAGCATTATATCATACCGGTGTGTGGCCATGTGGTA TAACCCAAACTGGGGAATTGGTTATCCTATAA
Upstream 100 bases:
>100_bases CTGCCTTTTTTGCAAAAAGACGTAAAAAAGTTTTTAATTCACTCCGGCAGTTGCTGGCAGCGTTAGGACAAACCAAGAAT CGACTCAGGCGTAACTGCTA
Downstream 100 bases:
>100_bases AAGCAATGAAGACAATAAAATATAAGTTAAGACAGAAATAACTCGATGATCAATAGCTATACCAAATCAAGCATTGTTGC ACCAGTGACCTTCTAAAACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MNIEALIEQIENTDWLSQAEHILAISQLQIEWDWLPSSRDQSDPFEGTYPTKPDEQLYDKEAEKVVYKAALKSLRSVGKT HPKLVDGPHNYTEAMKGSALFACRHAAKEVLSNQPGKWVAILALYHTGVWPCGITQTGELVIL
Sequences:
>Translated_143_residues MNIEALIEQIENTDWLSQAEHILAISQLQIEWDWLPSSRDQSDPFEGTYPTKPDEQLYDKEAEKVVYKAALKSLRSVGKT HPKLVDGPHNYTEAMKGSALFACRHAAKEVLSNQPGKWVAILALYHTGVWPCGITQTGELVIL >Mature_143_residues MNIEALIEQIENTDWLSQAEHILAISQLQIEWDWLPSSRDQSDPFEGTYPTKPDEQLYDKEAEKVVYKAALKSLRSVGKT HPKLVDGPHNYTEAMKGSALFACRHAAKEVLSNQPGKWVAILALYHTGVWPCGITQTGELVIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16059; Mature: 16059
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIEALIEQIENTDWLSQAEHILAISQLQIEWDWLPSSRDQSDPFEGTYPTKPDEQLYDK CCHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHH EAEKVVYKAALKSLRSVGKTHPKLVDGPHNYTEAMKGSALFACRHAAKEVLSNQPGKWVA HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHH ILALYHTGVWPCGITQTGELVIL HHHHHHCCCCCCCCCCCCCEEEC >Mature Secondary Structure MNIEALIEQIENTDWLSQAEHILAISQLQIEWDWLPSSRDQSDPFEGTYPTKPDEQLYDK CCHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHH EAEKVVYKAALKSLRSVGKTHPKLVDGPHNYTEAMKGSALFACRHAAKEVLSNQPGKWVA HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHH ILALYHTGVWPCGITQTGELVIL HHHHHHCCCCCCCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA