Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597027

Identifier: 120597027

GI number: 120597027

Start: 219543

End: 220055

Strand: Direct

Name: 120597027

Synonym: Sputw3181_0195

Alternate gene names: NA

Gene position: 219543-220055 (Clockwise)

Preceding gene: 120597026

Following gene: 120597028

Centisome position: 4.66

GC content: 40.74

Gene sequence:

>513_bases
ATGCTTTATGATTTAACGGTTGTACAATTTAGCAAGATGCTAAAAAACTTAAGCGTTATTCTTGAAAAGGGCGAATGCTT
CGCAAACCTCAAGAAAGTCGATATGGCGGTGCTGTTAAACTCCCGTTTAGCTCCAGATCAATTTAACCTTATTCGCCAAG
TTCAAATTGCCTGTGATACAGCCAAAATTGGCGTAGCACGTTTGACAGATAACTTGGATACAGTGCCAAAGCATGATGAT
AGCGAAACGACGCTGGCTGAGTTACAAGCACGTATTAGCTCAGTTTTAGATTACTTAGCGACGTTTAAAGCGGAGGATTT
TGCTAATGCGGCGGCAATTCATGTTTCACAACCACGTTGGGAAGGAAAATATCTGACAGGTTATGAGTTTGCCATTGAGC
ATGCTATCCCGAACATTTACTTTCATATAACAACAGCCTACGCAATTTTGCGCCATAATGGTGTCGAAATTGGAAAGAAA
GATTACCTTGGTGCTATGCCATATAAGTCGTAA

Upstream 100 bases:

>100_bases
GTGAACACTTAAATTCTAAAGACAATTGAAATTGAGTAATTTGCCCCAAGATAGTATGAAGTGCTGCAGTTTTGTAGCGT
CCACCACCGAGGTCCATGCC

Downstream 100 bases:

>100_bases
ATCTAGGCTAGATGTAGTACTGTTGCATGGCTTAATTGTTGTGCAACAGCGGCTTTGCCGCTCGAGTTTGTCAACCTTTC
TGCATTACCACCTGTTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MLYDLTVVQFSKMLKNLSVILEKGECFANLKKVDMAVLLNSRLAPDQFNLIRQVQIACDTAKIGVARLTDNLDTVPKHDD
SETTLAELQARISSVLDYLATFKAEDFANAAAIHVSQPRWEGKYLTGYEFAIEHAIPNIYFHITTAYAILRHNGVEIGKK
DYLGAMPYKS

Sequences:

>Translated_170_residues
MLYDLTVVQFSKMLKNLSVILEKGECFANLKKVDMAVLLNSRLAPDQFNLIRQVQIACDTAKIGVARLTDNLDTVPKHDD
SETTLAELQARISSVLDYLATFKAEDFANAAAIHVSQPRWEGKYLTGYEFAIEHAIPNIYFHITTAYAILRHNGVEIGKK
DYLGAMPYKS
>Mature_170_residues
MLYDLTVVQFSKMLKNLSVILEKGECFANLKKVDMAVLLNSRLAPDQFNLIRQVQIACDTAKIGVARLTDNLDTVPKHDD
SETTLAELQARISSVLDYLATFKAEDFANAAAIHVSQPRWEGKYLTGYEFAIEHAIPNIYFHITTAYAILRHNGVEIGKK
DYLGAMPYKS

Specific function: Unknown

COG id: COG3812

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19083; Mature: 19083

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYDLTVVQFSKMLKNLSVILEKGECFANLKKVDMAVLLNSRLAPDQFNLIRQVQIACDT
CCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCH
AKIGVARLTDNLDTVPKHDDSETTLAELQARISSVLDYLATFKAEDFANAAAIHVSQPRW
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHCCCEEEEEECCCCC
EGKYLTGYEFAIEHAIPNIYFHITTAYAILRHNGVEIGKKDYLGAMPYKS
CCCEECHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCCCCHHCCCCCCCCC
>Mature Secondary Structure
MLYDLTVVQFSKMLKNLSVILEKGECFANLKKVDMAVLLNSRLAPDQFNLIRQVQIACDT
CCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCH
AKIGVARLTDNLDTVPKHDDSETTLAELQARISSVLDYLATFKAEDFANAAAIHVSQPRW
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHCCCEEEEEECCCCC
EGKYLTGYEFAIEHAIPNIYFHITTAYAILRHNGVEIGKKDYLGAMPYKS
CCCEECHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCCCCHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA