| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is 120596931
Identifier: 120596931
GI number: 120596931
Start: 122043
End: 122519
Strand: Direct
Name: 120596931
Synonym: Sputw3181_0098
Alternate gene names: NA
Gene position: 122043-122519 (Clockwise)
Preceding gene: 120596930
Following gene: 120596936
Centisome position: 2.59
GC content: 45.7
Gene sequence:
>477_bases ATGCAAGTTATCTTCACTAAAGGAACTCAGCGTTATGGTCAGTTACGTTGTGTGCGTATGGATGGCAGTGCTACAGAAAC TAAAATGCCTGAGCAGGGGATTGCACCCCACGATATGATTCACTATGTGGTTGAAAAACGGCTACAGATCCAAGGGGCCT TTTTTTCACAGGTGAAAGCCGGTGCAAATATCAGTTTTACACTTGAGCATAATCAAGCCTCCCGTGCTGTTACCAATAAA GCTGAGATATGGCAAGTTGAGTCTATCGTTGAAACCTTGCAGTCCTTGCTGTGGCCGGGCGATACGCCGACCTACGACGA GTTTATTTATCTGTTAGAGCAGGCTAGCAGCAGCCGTAAGCTGGCGCTCCCCCAAATTAGCGAAGTGGATTTTGATCATA TTCTTAACGAAATTATGGATCTGACAGTCGAATGGCAAGGCTTAGGTGAAGGCCAGTCGCTAACCTTAAAGTTTTAA
Upstream 100 bases:
>100_bases TTTTATTCAGCGTAACTTATAGCCTTGGTTGGCGCTGCCTGGCCATAGTCTATACTTGAGCATATAAGTTTGTGCTCGTT AATGTGCTAAGGATGGTTAT
Downstream 100 bases:
>100_bases CCTAAAAGCACGTTTTATCGTGCTTTTAGGCTTAGGGCTATGGCCGACTAATTTGGCCATTCATATTACTCTCTATTACG GCGTTCTTGGCTTTGGGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MQVIFTKGTQRYGQLRCVRMDGSATETKMPEQGIAPHDMIHYVVEKRLQIQGAFFSQVKAGANISFTLEHNQASRAVTNK AEIWQVESIVETLQSLLWPGDTPTYDEFIYLLEQASSSRKLALPQISEVDFDHILNEIMDLTVEWQGLGEGQSLTLKF
Sequences:
>Translated_158_residues MQVIFTKGTQRYGQLRCVRMDGSATETKMPEQGIAPHDMIHYVVEKRLQIQGAFFSQVKAGANISFTLEHNQASRAVTNK AEIWQVESIVETLQSLLWPGDTPTYDEFIYLLEQASSSRKLALPQISEVDFDHILNEIMDLTVEWQGLGEGQSLTLKF >Mature_158_residues MQVIFTKGTQRYGQLRCVRMDGSATETKMPEQGIAPHDMIHYVVEKRLQIQGAFFSQVKAGANISFTLEHNQASRAVTNK AEIWQVESIVETLQSLLWPGDTPTYDEFIYLLEQASSSRKLALPQISEVDFDHILNEIMDLTVEWQGLGEGQSLTLKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17907; Mature: 17907
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVIFTKGTQRYGQLRCVRMDGSATETKMPEQGIAPHDMIHYVVEKRLQIQGAFFSQVKA CEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC GANISFTLEHNQASRAVTNKAEIWQVESIVETLQSLLWPGDTPTYDEFIYLLEQASSSRK CCCEEEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC LALPQISEVDFDHILNEIMDLTVEWQGLGEGQSLTLKF EECCCCCCCCHHHHHHHHHHCEEEEEECCCCCEEEEEC >Mature Secondary Structure MQVIFTKGTQRYGQLRCVRMDGSATETKMPEQGIAPHDMIHYVVEKRLQIQGAFFSQVKA CEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC GANISFTLEHNQASRAVTNKAEIWQVESIVETLQSLLWPGDTPTYDEFIYLLEQASSSRK CCCEEEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC LALPQISEVDFDHILNEIMDLTVEWQGLGEGQSLTLKF EECCCCCCCCHHHHHHHHHHCEEEEEECCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA