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The map label for this gene is parB [H]

Identifier: 119947331

GI number: 119947331

Start: 4553907

End: 4554824

Strand: Reverse

Name: parB [H]

Synonym: Ping_3738

Alternate gene names: 119947331

Gene position: 4554824-4553907 (Counterclockwise)

Preceding gene: 119947332

Following gene: 119947330

Centisome position: 99.9

GC content: 35.19

Gene sequence:

>918_bases
ATGTTAGGGAAAAAAAGAGGTTTAGGCAAAGGACTCGATTCATTATTAAGCAGTAGTTCATCGCACCGCCAAAAACAGGT
TTCTCATGACGTTAATACAGACAAAAAACAACCGTTGATTGACGATGTTAGTGTTAAGGGAATATTAATAGATATTGATG
TCAATTTTTTGCATCCGGGTAAATATCAACCTAGAAGAGGAATGGATAATAAAGCATTAGATGAACTGGCTAATTCAATC
CATGCGCAAGGTATTATCCAACCTCTGGTCATCAGAGAAACCGGTCACCAACAATATGAGATTATTGCTGGAGAACGCCG
TTGGAGAGCGGCTAAAATTATTGGTCTGGAAAATGTTCCCTGTATAATTAAAAACGTAGAAGATAATGCGGCAATAGCCA
TTGCATTAATAGAAAATATTCAACGCGAAAACCTTAATGCAATGGAAGAAGCAGTTGCATTAAAACGCCTTTTAGAAGAA
TTTGATTTAACGCATATTGAAGTCGCTAAGGCGGTTGGAAAATCACGTACCACGATCAGTAATTTATTAAGGTTAAATAA
TTTAAATGAAGCCGTTAAATTATTATTGGAGCATGGTGATATTGAAATGGGGCACGCCAGAGCACTACTAAGCTGTGAAA
AAAATCAGCAAGTTGAGTTAGCAAAGATAATTATTGCAAAATCATTAAACGTGAGAAAAGCAGAGTTATTAGTAAAAAAA
GCCTTAAATCCTCAACCGGAAAAACAGGCTTCCCTACCCTGCCAAAAAACAGAAAAAATTATTAACACATTTCAAAATAA
ATTTGGTTTATCAGTAACCGCTAAAACGGGCAAAAAACAAGCGGGTCAATTGGTTATTAATTATAATTCGCTGGATGATT
TAGAAGAATTAATGTATAAAATTGCGCTAGAACAATGA

Upstream 100 bases:

>100_bases
GACTGGTGCAAAAGCTTATCTGGCATTAGCCGCTGAAATATTGCGACAAGAAGAAAAACTTGAGTAGCAAAGTGCTAGAA
CGGTCTAAATAGGGATTATC

Downstream 100 bases:

>100_bases
AATGCGAAAGAAATAAATATTATTGATCTATAGCGCATATATAGCGCCCAAAATGTGCTCTTATATTGCATTGACTTGGA
TGTTGCTATAGTCTTCACCA

Product: parB-like partition proteins

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MLGKKRGLGKGLDSLLSSSSSHRQKQVSHDVNTDKKQPLIDDVSVKGILIDIDVNFLHPGKYQPRRGMDNKALDELANSI
HAQGIIQPLVIRETGHQQYEIIAGERRWRAAKIIGLENVPCIIKNVEDNAAIAIALIENIQRENLNAMEEAVALKRLLEE
FDLTHIEVAKAVGKSRTTISNLLRLNNLNEAVKLLLEHGDIEMGHARALLSCEKNQQVELAKIIIAKSLNVRKAELLVKK
ALNPQPEKQASLPCQKTEKIINTFQNKFGLSVTAKTGKKQAGQLVINYNSLDDLEELMYKIALEQ

Sequences:

>Translated_305_residues
MLGKKRGLGKGLDSLLSSSSSHRQKQVSHDVNTDKKQPLIDDVSVKGILIDIDVNFLHPGKYQPRRGMDNKALDELANSI
HAQGIIQPLVIRETGHQQYEIIAGERRWRAAKIIGLENVPCIIKNVEDNAAIAIALIENIQRENLNAMEEAVALKRLLEE
FDLTHIEVAKAVGKSRTTISNLLRLNNLNEAVKLLLEHGDIEMGHARALLSCEKNQQVELAKIIIAKSLNVRKAELLVKK
ALNPQPEKQASLPCQKTEKIINTFQNKFGLSVTAKTGKKQAGQLVINYNSLDDLEELMYKIALEQ
>Mature_305_residues
MLGKKRGLGKGLDSLLSSSSSHRQKQVSHDVNTDKKQPLIDDVSVKGILIDIDVNFLHPGKYQPRRGMDNKALDELANSI
HAQGIIQPLVIRETGHQQYEIIAGERRWRAAKIIGLENVPCIIKNVEDNAAIAIALIENIQRENLNAMEEAVALKRLLEE
FDLTHIEVAKAVGKSRTTISNLLRLNNLNEAVKLLLEHGDIEMGHARALLSCEKNQQVELAKIIIAKSLNVRKAELLVKK
ALNPQPEKQASLPCQKTEKIINTFQNKFGLSVTAKTGKKQAGQLVINYNSLDDLEELMYKIALEQ

Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication [H]

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741 [H]

Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 33990; Mature: 33990

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGKKRGLGKGLDSLLSSSSSHRQKQVSHDVNTDKKQPLIDDVSVKGILIDIDVNFLHPG
CCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEEECCC
KYQPRRGMDNKALDELANSIHAQGIIQPLVIRETGHQQYEIIAGERRWRAAKIIGLENVP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEECCCCHHHEEEECCCCCC
CIIKNVEDNAAIAIALIENIQRENLNAMEEAVALKRLLEEFDLTHIEVAKAVGKSRTTIS
EEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHH
NLLRLNNLNEAVKLLLEHGDIEMGHARALLSCEKNQQVELAKIIIAKSLNVRKAELLVKK
HHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHH
ALNPQPEKQASLPCQKTEKIINTFQNKFGLSVTAKTGKKQAGQLVINYNSLDDLEELMYK
HCCCCCCHHHCCCHHHHHHHHHHHHHHHCCEEEECCCCCCCCEEEEEECCHHHHHHHHHH
IALEQ
HHCCC
>Mature Secondary Structure
MLGKKRGLGKGLDSLLSSSSSHRQKQVSHDVNTDKKQPLIDDVSVKGILIDIDVNFLHPG
CCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEEECCC
KYQPRRGMDNKALDELANSIHAQGIIQPLVIRETGHQQYEIIAGERRWRAAKIIGLENVP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEECCCCHHHEEEECCCCCC
CIIKNVEDNAAIAIALIENIQRENLNAMEEAVALKRLLEEFDLTHIEVAKAVGKSRTTIS
EEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHH
NLLRLNNLNEAVKLLLEHGDIEMGHARALLSCEKNQQVELAKIIIAKSLNVRKAELLVKK
HHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHH
ALNPQPEKQASLPCQKTEKIINTFQNKFGLSVTAKTGKKQAGQLVINYNSLDDLEELMYK
HCCCCCCHHHCCCHHHHHHHHHHHHHHHCCEEEECCCCCCCCEEEEEECCHHHHHHHHHH
IALEQ
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12534463 [H]