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The map label for this gene is atpF

Identifier: 119947327

GI number: 119947327

Start: 4551714

End: 4552184

Strand: Reverse

Name: atpF

Synonym: Ping_3734

Alternate gene names: 119947327

Gene position: 4552184-4551714 (Counterclockwise)

Preceding gene: 119947328

Following gene: 119947326

Centisome position: 99.84

GC content: 40.98

Gene sequence:

>471_bases
ATGAATATAAACGCAACCCTATTAGGCCAAGCTATCGCATTTGCGGTATTTGTTTGGTTCTGCATGAAGTATGTGTGGCC
ACCACTTCTTGCCGCGATAGAAGATCGCCAAAAGAAGATTTCTGATGGTTTAACACAAGCAGAACGAGCAGGGAAAGATC
TTGAGTTAGCACAAGCTAAAGCATCTGAAAAGTTAAAAGAAGCTAAGGTACAGGCAGCAGAGATTATTGAACAGGCAAAT
AAACGTCGTAATCAAATTGTTGAAGCTGCAAAAACAGAAGCTGAGACCGAGCGTCAAAAAATAATTGCGCAAGGTGAAGC
AGAAGTTGAAGTGGATCGTAATCGTGTTCGCGAAGAACTCCGTTTAAAGGTTTCAGCTCTTGCCATTGCGGGTGCTGAGA
AAATCATTAAGCGTTCTATTGATAAAGAAGCGAACAGCGATATTATCGATAAATTGGTTGCTGAACTATAA

Upstream 100 bases:

>100_bases
CGGTTGGTGTTGCACTATTTTTCGTATTCGCAAACCCATTCCTAAGTCAACTACCTGCTTAATATAGGATCCTGATTAAC
TACATTATTAAGGAGCCGTT

Downstream 100 bases:

>100_bases
GGAGTGAGCTTATGTCTGAATTGACTACCGTAGCTCGCCCTTATGCAAGAGCTGCTTTTGAATTTGCCGTTGATAGTAAC
AAAATCGAAGCTTGGTCTGA

Product: ATP synthase F0, B subunit

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MNINATLLGQAIAFAVFVWFCMKYVWPPLLAAIEDRQKKISDGLTQAERAGKDLELAQAKASEKLKEAKVQAAEIIEQAN
KRRNQIVEAAKTEAETERQKIIAQGEAEVEVDRNRVREELRLKVSALAIAGAEKIIKRSIDKEANSDIIDKLVAEL

Sequences:

>Translated_156_residues
MNINATLLGQAIAFAVFVWFCMKYVWPPLLAAIEDRQKKISDGLTQAERAGKDLELAQAKASEKLKEAKVQAAEIIEQAN
KRRNQIVEAAKTEAETERQKIIAQGEAEVEVDRNRVREELRLKVSALAIAGAEKIIKRSIDKEANSDIIDKLVAEL
>Mature_156_residues
MNINATLLGQAIAFAVFVWFCMKYVWPPLLAAIEDRQKKISDGLTQAERAGKDLELAQAKASEKLKEAKVQAAEIIEQAN
KRRNQIVEAAKTEAETERQKIIAQGEAEVEVDRNRVREELRLKVSALAIAGAEKIIKRSIDKEANSDIIDKLVAEL

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

Organism=Escherichia coli, GI1790174, Length=156, Percent_Identity=69.2307692307692, Blast_Score=219, Evalue=5e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_PSYIN (A1T0Z3)

Other databases:

- EMBL:   CP000510
- RefSeq:   YP_945007.1
- ProteinModelPortal:   A1T0Z3
- STRING:   A1T0Z3
- GeneID:   4624823
- GenomeReviews:   CP000510_GR
- KEGG:   pin:Ping_3734
- eggNOG:   COG0711
- HOGENOM:   HBG617328
- OMA:   NPGLIFW
- PhylomeDB:   A1T0Z3
- BioCyc:   PING357804:PING_3734-MONOMER
- HAMAP:   MF_01398
- InterPro:   IPR002146
- InterPro:   IPR005864
- TIGRFAMs:   TIGR01144

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 17397; Mature: 17397

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1b9b522c)-;

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNINATLLGQAIAFAVFVWFCMKYVWPPLLAAIEDRQKKISDGLTQAERAGKDLELAQAK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
ASEKLKEAKVQAAEIIEQANKRRNQIVEAAKTEAETERQKIIAQGEAEVEVDRNRVREEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
RLKVSALAIAGAEKIIKRSIDKEANSDIIDKLVAEL
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
>Mature Secondary Structure
MNINATLLGQAIAFAVFVWFCMKYVWPPLLAAIEDRQKKISDGLTQAERAGKDLELAQAK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
ASEKLKEAKVQAAEIIEQANKRRNQIVEAAKTEAETERQKIIAQGEAEVEVDRNRVREEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
RLKVSALAIAGAEKIIKRSIDKEANSDIIDKLVAEL
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA