| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is htxH [H]
Identifier: 119947286
GI number: 119947286
Start: 4499743
End: 4500867
Strand: Reverse
Name: htxH [H]
Synonym: Ping_3690
Alternate gene names: 119947286
Gene position: 4500867-4499743 (Counterclockwise)
Preceding gene: 119947287
Following gene: 119947285
Centisome position: 98.71
GC content: 47.29
Gene sequence:
>1125_bases ATGGGTTACGTTGCAATTAAAGGCGGTGGTAAGGCTATTGCGGGTGCGGAAAAACTATTGGAATTCGTGCGTACTCGTCA AGGTGAGTCGGCGGAACCATTAGATTTAGAGACCATTGAAAACCAGTTGTATTTTCTACATAGCCGAATTATATCTGAAG GTGGCCTGTATCACCCTAAACTTGCCTCTTTGGCCATTAAACAAAGCTTGGGCGATACGCTGGAAGCCTCCTTTGCTTTA CGTGCTTATCGTTCAACCAAGCCGCGTCTGGTTGAATCTCCGGTCACAGAGACCAGCAATATGCGCGTGATTCGTCGTAT TTCGGCCTCTTTTAAGGACATTCCCGGTGGGCAGATGTTGGGTGCCAGTACTGATTATGCCTTGCGTTTAATGCGTACCG AGCTGCTTGATGAATCACCAGAAGCCTTTAAAGCCGTGGCGGCTAATTGGCTGGATAATAATAGTCATAATGAGATTCCT GATACTTTTCCAAAAGTCTTGGACGCCCTACGTGAAGAAGGATTGCTGCCACCTGTTGACCAAGCTGCAGCTGAAAAAAA ACCCTTTGATATTACGCGTGAACCACTGGTTTTTCCGGTGCCGCGTTCTGCCGCATTATCGACTATGGCGCGTTCTGAAA CAGGCTCTATTCTTGCCATTGCGTATTCCAATATGCGTGGCTACGGAGATATTCATCCAACGGTTGCCGAACTTAGAGTG GGCTATTTACCGGTTATGCTTCCACACCCGATCACCGGTGAGCCAATCGAAGTGGGTGAAGTATTAATGACGGAGTGTGA AGTCGTTGCCATGTACGAAGACGAAGAAGAGGGTGGGAAACCGACCTTTAGTCTAGGTTACGGCGCTTGTTTTGGGCATA ACGAAGTTAAAGCCATCTCAATGTCGGTGTTAGACCGTGCCTTACAGTCCGGCATGAAAAATGGGCCGACCAACCCTTCA GAAGATCCCGAGTTTGTATTGCTGCACATTGATGGTATCGATTCGATGGGATTCTGTACACACTATAAAATGCCGCACTA TGTGACCTTTCAATCGGATATGGACAGGTTAAGAACTACGCAAGATAAGCATGACGATGCAAACCAAGGAGCTGGCAATG TCTAA
Upstream 100 bases:
>100_bases GAATTGACTGTGTTTTAGTTGATGACACTCAGATTATGGCGCTACCACGCACCACCAAGGTTGAGATTATCGAGATCAAC ACTAATAAGGGACTAAACTA
Downstream 100 bases:
>100_bases TCAAGAAAACGGATCAGGCTCAGCATTCAGAGAAGCTTCTGCCGACTATAATTTTGGTTTCTTAGATGAGAATGCCAAAA AAGAAATCCGCCGCAGTATT
Product: phosphonate metabolism
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 374; Mature: 373
Protein sequence:
>374_residues MGYVAIKGGGKAIAGAEKLLEFVRTRQGESAEPLDLETIENQLYFLHSRIISEGGLYHPKLASLAIKQSLGDTLEASFAL RAYRSTKPRLVESPVTETSNMRVIRRISASFKDIPGGQMLGASTDYALRLMRTELLDESPEAFKAVAANWLDNNSHNEIP DTFPKVLDALREEGLLPPVDQAAAEKKPFDITREPLVFPVPRSAALSTMARSETGSILAIAYSNMRGYGDIHPTVAELRV GYLPVMLPHPITGEPIEVGEVLMTECEVVAMYEDEEEGGKPTFSLGYGACFGHNEVKAISMSVLDRALQSGMKNGPTNPS EDPEFVLLHIDGIDSMGFCTHYKMPHYVTFQSDMDRLRTTQDKHDDANQGAGNV
Sequences:
>Translated_374_residues MGYVAIKGGGKAIAGAEKLLEFVRTRQGESAEPLDLETIENQLYFLHSRIISEGGLYHPKLASLAIKQSLGDTLEASFAL RAYRSTKPRLVESPVTETSNMRVIRRISASFKDIPGGQMLGASTDYALRLMRTELLDESPEAFKAVAANWLDNNSHNEIP DTFPKVLDALREEGLLPPVDQAAAEKKPFDITREPLVFPVPRSAALSTMARSETGSILAIAYSNMRGYGDIHPTVAELRV GYLPVMLPHPITGEPIEVGEVLMTECEVVAMYEDEEEGGKPTFSLGYGACFGHNEVKAISMSVLDRALQSGMKNGPTNPS EDPEFVLLHIDGIDSMGFCTHYKMPHYVTFQSDMDRLRTTQDKHDDANQGAGNV >Mature_373_residues GYVAIKGGGKAIAGAEKLLEFVRTRQGESAEPLDLETIENQLYFLHSRIISEGGLYHPKLASLAIKQSLGDTLEASFALR AYRSTKPRLVESPVTETSNMRVIRRISASFKDIPGGQMLGASTDYALRLMRTELLDESPEAFKAVAANWLDNNSHNEIPD TFPKVLDALREEGLLPPVDQAAAEKKPFDITREPLVFPVPRSAALSTMARSETGSILAIAYSNMRGYGDIHPTVAELRVG YLPVMLPHPITGEPIEVGEVLMTECEVVAMYEDEEEGGKPTFSLGYGACFGHNEVKAISMSVLDRALQSGMKNGPTNPSE DPEFVLLHIDGIDSMGFCTHYKMPHYVTFQSDMDRLRTTQDKHDDANQGAGNV
Specific function: Belongs to an operon involved in hypophosphite oxidation. Exact function not known [H]
COG id: COG3626
COG function: function code P; Uncharacterized enzyme of phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phnI family [H]
Homologues:
Organism=Escherichia coli, GI1790537, Length=365, Percent_Identity=42.1917808219178, Blast_Score=258, Evalue=4e-70,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008773 [H]
Pfam domain/function: PF05861 PhnI [H]
EC number: NA
Molecular weight: Translated: 41019; Mature: 40888
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYVAIKGGGKAIAGAEKLLEFVRTRQGESAEPLDLETIENQLYFLHSRIISEGGLYHPK CCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCH LASLAIKQSLGDTLEASFALRAYRSTKPRLVESPVTETSNMRVIRRISASFKDIPGGQML HHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEE GASTDYALRLMRTELLDESPEAFKAVAANWLDNNSHNEIPDTFPKVLDALREEGLLPPVD CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHH QAAAEKKPFDITREPLVFPVPRSAALSTMARSETGSILAIAYSNMRGYGDIHPTVAELRV HHHHCCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHH GYLPVMLPHPITGEPIEVGEVLMTECEVVAMYEDEEEGGKPTFSLGYGACFGHNEVKAIS CCEEEECCCCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCCEEEECCCEEECCCCHHHHH MSVLDRALQSGMKNGPTNPSEDPEFVLLHIDGIDSMGFCTHYKMPHYVTFQSDMDRLRTT HHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCEEEEHHHHHHHHCC QDKHDDANQGAGNV CCCCCCCCCCCCCC >Mature Secondary Structure GYVAIKGGGKAIAGAEKLLEFVRTRQGESAEPLDLETIENQLYFLHSRIISEGGLYHPK CEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCH LASLAIKQSLGDTLEASFALRAYRSTKPRLVESPVTETSNMRVIRRISASFKDIPGGQML HHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEE GASTDYALRLMRTELLDESPEAFKAVAANWLDNNSHNEIPDTFPKVLDALREEGLLPPVD CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHH QAAAEKKPFDITREPLVFPVPRSAALSTMARSETGSILAIAYSNMRGYGDIHPTVAELRV HHHHCCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHH GYLPVMLPHPITGEPIEVGEVLMTECEVVAMYEDEEEGGKPTFSLGYGACFGHNEVKAIS CCEEEECCCCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCCEEEECCCEEECCCCHHHHH MSVLDRALQSGMKNGPTNPSEDPEFVLLHIDGIDSMGFCTHYKMPHYVTFQSDMDRLRTT HHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCEEEEHHHHHHHHCC QDKHDDANQGAGNV CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9791102 [H]