BacMap

Definition	Psychromonas ingrahamii 37, complete genome.
Accession	NC_008709
Length	4,559,598

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The map label for this gene is phnL [H]

Identifier: 119947283

GI number: 119947283

Start: 4497246

End: 4497983

Strand: Reverse

Name: phnL [H]

Synonym: Ping_3687

Alternate gene names: 119947283

Gene position: 4497983-4497246 (Counterclockwise)

Preceding gene: 119947284

Following gene: 119947282

Centisome position: 98.65

GC content: 43.77

Gene sequence:

>738_bases
ATGAGTATTCAACCTATCTTAGAAGTCGAAGACTTTTCAAAAACTTTTATGCTGCATGAACAAGGAACAGAACTGCCTTC
GGCGCACAGCGTATTTTTAAAAGCTTACCCTGGTCGTTTAACCGCTTTAACCGGTCCTACAGGTGCAGGGAAATCGACAG
TTTTAAAAGGCATTTACCGTACTTATTTACCGACCAGCGGGCGCATAATATTTACCACGGAACAAGGACAACAAACGGAT
TTGGCTAAGGCTGATGAACATCAAATTCTAGAGTTGCGTAAAGACGAGATTGGATTTGTCACCCAGTTTTTACATACTCT
GCCCCGGCAGTCGACTGAAGATGTCGTGGCCATGCCTTTAATCAAGAAAGGCATATCGCGGATTATCGCACTTGAAAAAG
CACGAGAAATATTAAGCCAACTGAACCTGCCGGAAAGACTGTGGGCAGTTTCTCCTGCTACTTTTTCAGGTGGAGAAAAA
CAACGCGTCAATTTGGCACGCGGGTTATTAGCACAACCAAGATTATTGTTACTCGATGAGCCGACCGCAAGCTTAGATCC
AAAAACCACGGATCGTGTTGTTGAATTGATTAACAACCTCAAACAGACGGGTACCGCGATGATTGCCATCTTTCACGATA
TGGATTTAGTGAAAAGGCTAGCCGATAGTGTGGTGGTGCTTGAACCGCCAATCGGTACCGAAAACTTCTTTAATTCAGAT
ATAAACAAGGCTCCATAA

Upstream 100 bases:

>100_bases
GCATTATTGAAACAGGCTTAACGGATCAAATCTTAGAAGATCCGCAAGATGCTTATACACAACGCTTGGTTGCGTCAGCA
CTTTAAGGGGACCATGGACA

Downstream 100 bases:

>100_bases
CCATGAATACGCAACCTTTATATATTAAAAATGCAACGCTCGTATTGGCTGACAATGTTCTCAACAAGGCGAGTTTATTA
ATAGAAAATGGGAAAATCTC

Product: ABC phosphonate transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MSIQPILEVEDFSKTFMLHEQGTELPSAHSVFLKAYPGRLTALTGPTGAGKSTVLKGIYRTYLPTSGRIIFTTEQGQQTD
LAKADEHQILELRKDEIGFVTQFLHTLPRQSTEDVVAMPLIKKGISRIIALEKAREILSQLNLPERLWAVSPATFSGGEK
QRVNLARGLLAQPRLLLLDEPTASLDPKTTDRVVELINNLKQTGTAMIAIFHDMDLVKRLADSVVVLEPPIGTENFFNSD
INKAP

Sequences:

>Translated_245_residues
MSIQPILEVEDFSKTFMLHEQGTELPSAHSVFLKAYPGRLTALTGPTGAGKSTVLKGIYRTYLPTSGRIIFTTEQGQQTD
LAKADEHQILELRKDEIGFVTQFLHTLPRQSTEDVVAMPLIKKGISRIIALEKAREILSQLNLPERLWAVSPATFSGGEK
QRVNLARGLLAQPRLLLLDEPTASLDPKTTDRVVELINNLKQTGTAMIAIFHDMDLVKRLADSVVVLEPPIGTENFFNSD
INKAP
>Mature_244_residues
SIQPILEVEDFSKTFMLHEQGTELPSAHSVFLKAYPGRLTALTGPTGAGKSTVLKGIYRTYLPTSGRIIFTTEQGQQTDL
AKADEHQILELRKDEIGFVTQFLHTLPRQSTEDVVAMPLIKKGISRIIALEKAREILSQLNLPERLWAVSPATFSGGEKQ
RVNLARGLLAQPRLLLLDEPTASLDPKTTDRVVELINNLKQTGTAMIAIFHDMDLVKRLADSVVVLEPPIGTENFFNSDI
NKAP

Specific function: Part of the binding-protein-dependent transport system for alkylphosphonates. Probably responsible for energy coupling to the transport system [H]

COG id: COG4778

COG function: function code P; ABC-type phosphonate transport system, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI153792144, Length=200, Percent_Identity=31.5, Blast_Score=78, Evalue=6e-15,
Organism=Homo sapiens, GI148612844, Length=205, Percent_Identity=30.7317073170732, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI255708477, Length=205, Percent_Identity=30.7317073170732, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI171184400, Length=230, Percent_Identity=29.5652173913043, Blast_Score=74, Evalue=9e-14,
Organism=Homo sapiens, GI21536378, Length=212, Percent_Identity=32.0754716981132, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI9961250, Length=220, Percent_Identity=30.9090909090909, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI4505771, Length=220, Percent_Identity=30.9090909090909, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI9961252, Length=220, Percent_Identity=30.9090909090909, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI156105685, Length=205, Percent_Identity=32.1951219512195, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI42741659, Length=210, Percent_Identity=31.4285714285714, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI31657092, Length=198, Percent_Identity=28.7878787878788, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI116734710, Length=221, Percent_Identity=23.9819004524887, Blast_Score=68, Evalue=8e-12,
Organism=Homo sapiens, GI27262624, Length=237, Percent_Identity=26.1603375527426, Blast_Score=68, Evalue=9e-12,
Organism=Homo sapiens, GI27262626, Length=237, Percent_Identity=26.1603375527426, Blast_Score=68, Evalue=9e-12,
Organism=Homo sapiens, GI27881501, Length=197, Percent_Identity=25.3807106598985, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI30795238, Length=197, Percent_Identity=25.3807106598985, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI27881506, Length=188, Percent_Identity=30.8510638297872, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI10947137, Length=188, Percent_Identity=30.8510638297872, Blast_Score=66, Evalue=3e-11,
Organism=Escherichia coli, GI1790534, Length=219, Percent_Identity=44.7488584474886, Blast_Score=190, Evalue=7e-50,
Organism=Escherichia coli, GI87081834, Length=220, Percent_Identity=35.4545454545455, Blast_Score=121, Evalue=4e-29,
Organism=Escherichia coli, GI1787105, Length=232, Percent_Identity=30.6034482758621, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1788225, Length=226, Percent_Identity=32.3008849557522, Blast_Score=110, Evalue=8e-26,
Organism=Escherichia coli, GI1787029, Length=201, Percent_Identity=31.8407960199005, Blast_Score=110, Evalue=8e-26,
Organism=Escherichia coli, GI1786398, Length=223, Percent_Identity=30.4932735426009, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI1786703, Length=221, Percent_Identity=33.4841628959276, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1787089, Length=196, Percent_Identity=33.1632653061224, Blast_Score=101, Evalue=4e-23,
Organism=Escherichia coli, GI1789873, Length=214, Percent_Identity=30.8411214953271, Blast_Score=100, Evalue=7e-23,
Organism=Escherichia coli, GI1789962, Length=232, Percent_Identity=30.6034482758621, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1789672, Length=200, Percent_Identity=27.5, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1788644, Length=219, Percent_Identity=30.5936073059361, Blast_Score=94, Evalue=7e-21,
Organism=Escherichia coli, GI145693107, Length=234, Percent_Identity=30.3418803418803, Blast_Score=94, Evalue=8e-21,
Organism=Escherichia coli, GI1787500, Length=226, Percent_Identity=27.8761061946903, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1788450, Length=193, Percent_Identity=32.1243523316062, Blast_Score=91, Evalue=9e-20,
Organism=Escherichia coli, GI87081791, Length=227, Percent_Identity=28.1938325991189, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1789991, Length=246, Percent_Identity=30.4878048780488, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1789032, Length=223, Percent_Identity=29.5964125560538, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1789891, Length=225, Percent_Identity=30.2222222222222, Blast_Score=88, Evalue=4e-19,
Organism=Escherichia coli, GI1790544, Length=240, Percent_Identity=28.3333333333333, Blast_Score=88, Evalue=5e-19,
Organism=Escherichia coli, GI48994997, Length=229, Percent_Identity=29.2576419213974, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1787759, Length=252, Percent_Identity=28.5714285714286, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI48994883, Length=230, Percent_Identity=30, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI1789864, Length=235, Percent_Identity=30.2127659574468, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI1786698, Length=196, Percent_Identity=31.1224489795918, Blast_Score=84, Evalue=7e-18,
Organism=Escherichia coli, GI1788761, Length=244, Percent_Identity=29.9180327868852, Blast_Score=84, Evalue=8e-18,
Organism=Escherichia coli, GI1786872, Length=188, Percent_Identity=29.2553191489362, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1788506, Length=263, Percent_Identity=30.4182509505703, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1786563, Length=207, Percent_Identity=31.8840579710145, Blast_Score=81, Evalue=7e-17,
Organism=Escherichia coli, GI1788472, Length=233, Percent_Identity=27.0386266094421, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1790162, Length=209, Percent_Identity=29.1866028708134, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1790525, Length=218, Percent_Identity=26.605504587156, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1786319, Length=233, Percent_Identity=27.8969957081545, Blast_Score=77, Evalue=9e-16,
Organism=Escherichia coli, GI1790467, Length=206, Percent_Identity=28.1553398058252, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1788210, Length=231, Percent_Identity=25.5411255411255, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI87082268, Length=206, Percent_Identity=28.1553398058252, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI1787792, Length=192, Percent_Identity=29.6875, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI87081709, Length=191, Percent_Identity=28.2722513089005, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI1787712, Length=193, Percent_Identity=30.0518134715026, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI1787164, Length=192, Percent_Identity=33.8541666666667, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1790190, Length=204, Percent_Identity=26.4705882352941, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1787143, Length=224, Percent_Identity=24.5535714285714, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1789963, Length=197, Percent_Identity=28.9340101522843, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1786345, Length=207, Percent_Identity=29.4685990338164, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI48995001, Length=228, Percent_Identity=29.3859649122807, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1787547, Length=259, Percent_Identity=25.4826254826255, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1788165, Length=204, Percent_Identity=30.8823529411765, Blast_Score=67, Evalue=9e-13,
Organism=Escherichia coli, GI1787758, Length=202, Percent_Identity=26.7326732673267, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1788053, Length=203, Percent_Identity=32.0197044334975, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1789593, Length=186, Percent_Identity=28.494623655914, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1789890, Length=211, Percent_Identity=28.436018957346, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1787370, Length=191, Percent_Identity=29.8429319371728, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1788897, Length=200, Percent_Identity=28, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1786803, Length=198, Percent_Identity=28.2828282828283, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI87082267, Length=197, Percent_Identity=27.4111675126904, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1787182, Length=202, Percent_Identity=29.2079207920792, Blast_Score=63, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17565938, Length=207, Percent_Identity=30.4347826086957, Blast_Score=77, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI17555318, Length=188, Percent_Identity=32.4468085106383, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17567265, Length=216, Percent_Identity=30.0925925925926, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI71992290, Length=194, Percent_Identity=30.9278350515464, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17558664, Length=208, Percent_Identity=30.7692307692308, Blast_Score=71, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI115533608, Length=210, Percent_Identity=26.1904761904762, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI193211015, Length=210, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI193211017, Length=210, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17559834, Length=203, Percent_Identity=27.5862068965517, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71996809, Length=203, Percent_Identity=29.064039408867, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17565586, Length=196, Percent_Identity=29.0816326530612, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17569143, Length=217, Percent_Identity=28.110599078341, Blast_Score=67, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI25146777, Length=208, Percent_Identity=30.2884615384615, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI115534520, Length=201, Percent_Identity=27.8606965174129, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71992285, Length=223, Percent_Identity=27.3542600896861, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI115535101, Length=201, Percent_Identity=28.8557213930348, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI212646699, Length=208, Percent_Identity=26.9230769230769, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17569145, Length=209, Percent_Identity=27.7511961722488, Blast_Score=65, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6323217, Length=208, Percent_Identity=28.3653846153846, Blast_Score=70, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6323959, Length=195, Percent_Identity=31.2820512820513, Blast_Score=68, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6324498, Length=231, Percent_Identity=27.2727272727273, Blast_Score=65, Evalue=7e-12,
Organism=Saccharomyces cerevisiae, GI6324985, Length=211, Percent_Identity=26.5402843601896, Blast_Score=65, Evalue=9e-12,
Organism=Drosophila melanogaster, GI24642252, Length=189, Percent_Identity=32.8042328042328, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI18859989, Length=189, Percent_Identity=32.8042328042328, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24641565, Length=204, Percent_Identity=29.4117647058824, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI85726357, Length=197, Percent_Identity=29.9492385786802, Blast_Score=71, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24662800, Length=191, Percent_Identity=26.7015706806283, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24581191, Length=181, Percent_Identity=27.6243093922652, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24581189, Length=181, Percent_Identity=27.6243093922652, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24581193, Length=181, Percent_Identity=27.6243093922652, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24581195, Length=181, Percent_Identity=27.6243093922652, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24641342, Length=230, Percent_Identity=28.695652173913, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24653245, Length=202, Percent_Identity=29.7029702970297, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI17136662, Length=202, Percent_Identity=30.1980198019802, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI17136592, Length=220, Percent_Identity=28.1818181818182, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI281363262, Length=202, Percent_Identity=29.7029702970297, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24659289, Length=195, Percent_Identity=26.6666666666667, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR012701 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 27112; Mature: 26980

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIQPILEVEDFSKTFMLHEQGTELPSAHSVFLKAYPGRLTALTGPTGAGKSTVLKGIYR
CCCCCCCCHHHHHHHEEEECCCCCCCCHHHHHEEECCCCEEEECCCCCCCHHHHHHHHHH
TYLPTSGRIIFTTEQGQQTDLAKADEHQILELRKDEIGFVTQFLHTLPRQSTEDVVAMPL
HHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
IKKGISRIIALEKAREILSQLNLPERLWAVSPATFSGGEKQRVNLARGLLAQPRLLLLDE
HHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEC
PTASLDPKTTDRVVELINNLKQTGTAMIAIFHDMDLVKRLADSVVVLEPPIGTENFFNSD
CCCCCCCCHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHCCEEEEECCCCCCHHHCCC
INKAP
CCCCC
>Mature Secondary Structure 
SIQPILEVEDFSKTFMLHEQGTELPSAHSVFLKAYPGRLTALTGPTGAGKSTVLKGIYR
CCCCCCCHHHHHHHEEEECCCCCCCCHHHHHEEECCCCEEEECCCCCCCHHHHHHHHHH
TYLPTSGRIIFTTEQGQQTDLAKADEHQILELRKDEIGFVTQFLHTLPRQSTEDVVAMPL
HHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
IKKGISRIIALEKAREILSQLNLPERLWAVSPATFSGGEKQRVNLARGLLAQPRLLLLDE
HHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEC
PTASLDPKTTDRVVELINNLKQTGTAMIAIFHDMDLVKRLADSVVVLEPPIGTENFFNSD
CCCCCCCCHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHCCEEEEECCCCCCHHHCCC
INKAP
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2155230; 1840580; 7610040; 9278503 [H]