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The map label for this gene is tnpA1 [H]

Identifier: 119947271

GI number: 119947271

Start: 4483433

End: 4483879

Strand: Direct

Name: tnpA1 [H]

Synonym: Ping_3671

Alternate gene names: 119947271

Gene position: 4483433-4483879 (Clockwise)

Preceding gene: 119947267

Following gene: 119947276

Centisome position: 98.33

GC content: 32.21

Gene sequence:

>447_bases
GTGCTGGATACTCAAAGAAATACACATCATGTTTATCGATTAATATATCACTTTGTTTGGATACCTAAATATCGTCACAA
AGTATTCAATGAGCCTCATCGTTCTACGATTAAAGCTATAATTCAAAAAATTGGATATGATTACGATATCGATATAGTGG
AATTAGAAATACCAGAAGATCATATTCATATGGTGATTAGGGGAATACCTGAGCAGTCACCAAGTGATGTAATGCAAATA
ATTAAAAGTATTACAGCACGTGAATTTTTCAGGACTTATCCTGAAATTAAAAAGAAATACTTCTGGGGAGGTAAATTATG
GACTCAAAGTGTCTTTGTTGAAACTATTGGAAATGCCACTGAAGAAGTCATTAGGAAATATGTTCAAAACCAACTGATTG
AATTAGATCGTAAAGAAATAAACTCAGATCAGCTGGACTTGTTTTAA

Upstream 100 bases:

>100_bases
ACAATCACACTACCAGAAATTGCTAATACTCGTGATAGTTGGATTAATGACAACTTTTAGGTTTTAACTAGCGAAGCGTA
AATCTCGGGGGCTTGTCCCC

Downstream 100 bases:

>100_bases
AACTCGGTCGCTTGCGGCCGAGATATTTATAACCCGCACTTTGAATGGTGAGGGGTATAGAAGAAGCTAAGGAAATGGTT
GAGGAGTCTGTGATGATATA

Product: transposase IS200-family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MLDTQRNTHHVYRLIYHFVWIPKYRHKVFNEPHRSTIKAIIQKIGYDYDIDIVELEIPEDHIHMVIRGIPEQSPSDVMQI
IKSITAREFFRTYPEIKKKYFWGGKLWTQSVFVETIGNATEEVIRKYVQNQLIELDRKEINSDQLDLF

Sequences:

>Translated_148_residues
MLDTQRNTHHVYRLIYHFVWIPKYRHKVFNEPHRSTIKAIIQKIGYDYDIDIVELEIPEDHIHMVIRGIPEQSPSDVMQI
IKSITAREFFRTYPEIKKKYFWGGKLWTQSVFVETIGNATEEVIRKYVQNQLIELDRKEINSDQLDLF
>Mature_148_residues
MLDTQRNTHHVYRLIYHFVWIPKYRHKVFNEPHRSTIKAIIQKIGYDYDIDIVELEIPEDHIHMVIRGIPEQSPSDVMQI
IKSITAREFFRTYPEIKKKYFWGGKLWTQSVFVETIGNATEEVIRKYVQNQLIELDRKEINSDQLDLF

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 17 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002686 [H]

Pfam domain/function: PF01797 Transposase_17 [H]

EC number: NA

Molecular weight: Translated: 17835; Mature: 17835

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDTQRNTHHVYRLIYHFVWIPKYRHKVFNEPHRSTIKAIIQKIGYDYDIDIVELEIPED
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEECCHH
HIHMVIRGIPEQSPSDVMQIIKSITAREFFRTYPEIKKKYFWGGKLWTQSVFVETIGNAT
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHH
EEVIRKYVQNQLIELDRKEINSDQLDLF
HHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MLDTQRNTHHVYRLIYHFVWIPKYRHKVFNEPHRSTIKAIIQKIGYDYDIDIVELEIPED
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEECCHH
HIHMVIRGIPEQSPSDVMQIIKSITAREFFRTYPEIKKKYFWGGKLWTQSVFVETIGNAT
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHH
EEVIRKYVQNQLIELDRKEINSDQLDLF
HHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]