| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119947265
Identifier: 119947265
GI number: 119947265
Start: 4476542
End: 4477477
Strand: Direct
Name: 119947265
Synonym: Ping_3663
Alternate gene names: NA
Gene position: 4476542-4477477 (Clockwise)
Preceding gene: 119947263
Following gene: 119947266
Centisome position: 98.18
GC content: 42.74
Gene sequence:
>936_bases ATGCCGATACTTGACCGAACACGACTTGCTCCCTCAGACAAATTACATCTTCTCGTAAAATCGTTCTCTTGCCAAGCTCA TGGCAACATTACTTCTTTAGCAAGTGATTTTTCTATCTCCAGAAAAGCAGTTTACGCAGCACGCGATGCGATGCAAACAG CTCTAAATGCGCTGACTCAAGATACGCGTGAACCAAATTGCATTATCCGTGTTGGTGTCGATAAATCTCAGTTACGTCGC GCTATCGTGGCTTTATCCATTACATCAGCCAACTCTATCCGCGCAATTCAAGATCAGATACCCATTATGTATCCAGGGTG CTCCGTTAGTTTTGGCTATGTTCAAGGGGTGATCATTGAGGCGCAAGAGCAGACTGCACTATTTAACAACACCATCCCTT TAGCCAATATTGAAAGTATTGCCGTTGATGAAATGTTTAGTCAAGGAGATCCTGTATTGGCGGGTATTGACCTTGATAGC GGGTATTTATTTTCTTTATCACATGAAACCTCACGTGTTGGTGAAACATGGGCTCGGGTGCTTAATGAAGCTAAAGAGCA AGGTATGGAGCCTAAGCATGTCGTTAAAGATGGCGCAAAAGGGATAACCAAAGGTATTGAAATGACTTTTGATGAGATAG AGCAACGCGACGATGCTTTTCACGCCGTTTACTTAGCCAGTAAAGCCAGATTGAAACTTGAGCATAAAGCCTATCGCCAC ATAGCTTATGAAGCCCACGCTGTCAAAAAGCACCTTAAAGCATCGCCTGAAAATAAGAGAAGTGTAGCAAAATCATTAGA TTGGGCTAAGAAAAAATACGCAGATGCCATTAAACGATATACCTTAGCAGCGCAAGCGGTTCAAAAAATACGTCGTGCAT TTTGCTGTATCAATTTTAAGAGTGGGGAGTTAATTACACTGGATGCCGCACAGTAA
Upstream 100 bases:
>100_bases CAAACTTGGGTAACAAATTGACAAGGAGAGTCTGAGAGATCAAACTACGTTATTTAAACCAATTGCTCTGCCAAAAGCAG TTTCTATAACAGTAAAAAAT
Downstream 100 bases:
>100_bases TTACTGACTCAAGCAATCGTGCACTTACGTAAAACAGAGCATAGAGATTGCCTATCCGTAGCACTCTACATAGATAATCG ACTCACTGGCTTAACGTCAG
Product: 3-isopropylmalate dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MPILDRTRLAPSDKLHLLVKSFSCQAHGNITSLASDFSISRKAVYAARDAMQTALNALTQDTREPNCIIRVGVDKSQLRR AIVALSITSANSIRAIQDQIPIMYPGCSVSFGYVQGVIIEAQEQTALFNNTIPLANIESIAVDEMFSQGDPVLAGIDLDS GYLFSLSHETSRVGETWARVLNEAKEQGMEPKHVVKDGAKGITKGIEMTFDEIEQRDDAFHAVYLASKARLKLEHKAYRH IAYEAHAVKKHLKASPENKRSVAKSLDWAKKKYADAIKRYTLAAQAVQKIRRAFCCINFKSGELITLDAAQ
Sequences:
>Translated_311_residues MPILDRTRLAPSDKLHLLVKSFSCQAHGNITSLASDFSISRKAVYAARDAMQTALNALTQDTREPNCIIRVGVDKSQLRR AIVALSITSANSIRAIQDQIPIMYPGCSVSFGYVQGVIIEAQEQTALFNNTIPLANIESIAVDEMFSQGDPVLAGIDLDS GYLFSLSHETSRVGETWARVLNEAKEQGMEPKHVVKDGAKGITKGIEMTFDEIEQRDDAFHAVYLASKARLKLEHKAYRH IAYEAHAVKKHLKASPENKRSVAKSLDWAKKKYADAIKRYTLAAQAVQKIRRAFCCINFKSGELITLDAAQ >Mature_310_residues PILDRTRLAPSDKLHLLVKSFSCQAHGNITSLASDFSISRKAVYAARDAMQTALNALTQDTREPNCIIRVGVDKSQLRRA IVALSITSANSIRAIQDQIPIMYPGCSVSFGYVQGVIIEAQEQTALFNNTIPLANIESIAVDEMFSQGDPVLAGIDLDSG YLFSLSHETSRVGETWARVLNEAKEQGMEPKHVVKDGAKGITKGIEMTFDEIEQRDDAFHAVYLASKARLKLEHKAYRHI AYEAHAVKKHLKASPENKRSVAKSLDWAKKKYADAIKRYTLAAQAVQKIRRAFCCINFKSGELITLDAAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34421; Mature: 34290
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPILDRTRLAPSDKLHLLVKSFSCQAHGNITSLASDFSISRKAVYAARDAMQTALNALTQ CCCCCCCCCCCCCHHHHEEHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH DTREPNCIIRVGVDKSQLRRAIVALSITSANSIRAIQDQIPIMYPGCSVSFGYVQGVIIE CCCCCCEEEEECCCHHHHHHHHHHEEECCCCCHHHHHHCCCEEECCCCCCHHHHEEEEEE AQEQTALFNNTIPLANIESIAVDEMFSQGDPVLAGIDLDSGYLFSLSHETSRVGETWARV ECHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCHHHHHHHHHHH LNEAKEQGMEPKHVVKDGAKGITKGIEMTFDEIEQRDDAFHAVYLASKARLKLEHKAYRH HHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHEEHHHHHHHHHHHHHHH IAYEAHAVKKHLKASPENKRSVAKSLDWAKKKYADAIKRYTLAAQAVQKIRRAFCCINFK HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEC SGELITLDAAQ CCCEEEEECCC >Mature Secondary Structure PILDRTRLAPSDKLHLLVKSFSCQAHGNITSLASDFSISRKAVYAARDAMQTALNALTQ CCCCCCCCCCCCHHHHEEHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH DTREPNCIIRVGVDKSQLRRAIVALSITSANSIRAIQDQIPIMYPGCSVSFGYVQGVIIE CCCCCCEEEEECCCHHHHHHHHHHEEECCCCCHHHHHHCCCEEECCCCCCHHHHEEEEEE AQEQTALFNNTIPLANIESIAVDEMFSQGDPVLAGIDLDSGYLFSLSHETSRVGETWARV ECHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCHHHHHHHHHHH LNEAKEQGMEPKHVVKDGAKGITKGIEMTFDEIEQRDDAFHAVYLASKARLKLEHKAYRH HHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHEEHHHHHHHHHHHHHHH IAYEAHAVKKHLKASPENKRSVAKSLDWAKKKYADAIKRYTLAAQAVQKIRRAFCCINFK HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEC SGELITLDAAQ CCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA