Definition Psychromonas ingrahamii 37, complete genome.
Accession NC_008709
Length 4,559,598

Click here to switch to the map view.

The map label for this gene is 119947265

Identifier: 119947265

GI number: 119947265

Start: 4476542

End: 4477477

Strand: Direct

Name: 119947265

Synonym: Ping_3663

Alternate gene names: NA

Gene position: 4476542-4477477 (Clockwise)

Preceding gene: 119947263

Following gene: 119947266

Centisome position: 98.18

GC content: 42.74

Gene sequence:

>936_bases
ATGCCGATACTTGACCGAACACGACTTGCTCCCTCAGACAAATTACATCTTCTCGTAAAATCGTTCTCTTGCCAAGCTCA
TGGCAACATTACTTCTTTAGCAAGTGATTTTTCTATCTCCAGAAAAGCAGTTTACGCAGCACGCGATGCGATGCAAACAG
CTCTAAATGCGCTGACTCAAGATACGCGTGAACCAAATTGCATTATCCGTGTTGGTGTCGATAAATCTCAGTTACGTCGC
GCTATCGTGGCTTTATCCATTACATCAGCCAACTCTATCCGCGCAATTCAAGATCAGATACCCATTATGTATCCAGGGTG
CTCCGTTAGTTTTGGCTATGTTCAAGGGGTGATCATTGAGGCGCAAGAGCAGACTGCACTATTTAACAACACCATCCCTT
TAGCCAATATTGAAAGTATTGCCGTTGATGAAATGTTTAGTCAAGGAGATCCTGTATTGGCGGGTATTGACCTTGATAGC
GGGTATTTATTTTCTTTATCACATGAAACCTCACGTGTTGGTGAAACATGGGCTCGGGTGCTTAATGAAGCTAAAGAGCA
AGGTATGGAGCCTAAGCATGTCGTTAAAGATGGCGCAAAAGGGATAACCAAAGGTATTGAAATGACTTTTGATGAGATAG
AGCAACGCGACGATGCTTTTCACGCCGTTTACTTAGCCAGTAAAGCCAGATTGAAACTTGAGCATAAAGCCTATCGCCAC
ATAGCTTATGAAGCCCACGCTGTCAAAAAGCACCTTAAAGCATCGCCTGAAAATAAGAGAAGTGTAGCAAAATCATTAGA
TTGGGCTAAGAAAAAATACGCAGATGCCATTAAACGATATACCTTAGCAGCGCAAGCGGTTCAAAAAATACGTCGTGCAT
TTTGCTGTATCAATTTTAAGAGTGGGGAGTTAATTACACTGGATGCCGCACAGTAA

Upstream 100 bases:

>100_bases
CAAACTTGGGTAACAAATTGACAAGGAGAGTCTGAGAGATCAAACTACGTTATTTAAACCAATTGCTCTGCCAAAAGCAG
TTTCTATAACAGTAAAAAAT

Downstream 100 bases:

>100_bases
TTACTGACTCAAGCAATCGTGCACTTACGTAAAACAGAGCATAGAGATTGCCTATCCGTAGCACTCTACATAGATAATCG
ACTCACTGGCTTAACGTCAG

Product: 3-isopropylmalate dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MPILDRTRLAPSDKLHLLVKSFSCQAHGNITSLASDFSISRKAVYAARDAMQTALNALTQDTREPNCIIRVGVDKSQLRR
AIVALSITSANSIRAIQDQIPIMYPGCSVSFGYVQGVIIEAQEQTALFNNTIPLANIESIAVDEMFSQGDPVLAGIDLDS
GYLFSLSHETSRVGETWARVLNEAKEQGMEPKHVVKDGAKGITKGIEMTFDEIEQRDDAFHAVYLASKARLKLEHKAYRH
IAYEAHAVKKHLKASPENKRSVAKSLDWAKKKYADAIKRYTLAAQAVQKIRRAFCCINFKSGELITLDAAQ

Sequences:

>Translated_311_residues
MPILDRTRLAPSDKLHLLVKSFSCQAHGNITSLASDFSISRKAVYAARDAMQTALNALTQDTREPNCIIRVGVDKSQLRR
AIVALSITSANSIRAIQDQIPIMYPGCSVSFGYVQGVIIEAQEQTALFNNTIPLANIESIAVDEMFSQGDPVLAGIDLDS
GYLFSLSHETSRVGETWARVLNEAKEQGMEPKHVVKDGAKGITKGIEMTFDEIEQRDDAFHAVYLASKARLKLEHKAYRH
IAYEAHAVKKHLKASPENKRSVAKSLDWAKKKYADAIKRYTLAAQAVQKIRRAFCCINFKSGELITLDAAQ
>Mature_310_residues
PILDRTRLAPSDKLHLLVKSFSCQAHGNITSLASDFSISRKAVYAARDAMQTALNALTQDTREPNCIIRVGVDKSQLRRA
IVALSITSANSIRAIQDQIPIMYPGCSVSFGYVQGVIIEAQEQTALFNNTIPLANIESIAVDEMFSQGDPVLAGIDLDSG
YLFSLSHETSRVGETWARVLNEAKEQGMEPKHVVKDGAKGITKGIEMTFDEIEQRDDAFHAVYLASKARLKLEHKAYRHI
AYEAHAVKKHLKASPENKRSVAKSLDWAKKKYADAIKRYTLAAQAVQKIRRAFCCINFKSGELITLDAAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34421; Mature: 34290

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPILDRTRLAPSDKLHLLVKSFSCQAHGNITSLASDFSISRKAVYAARDAMQTALNALTQ
CCCCCCCCCCCCCHHHHEEHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
DTREPNCIIRVGVDKSQLRRAIVALSITSANSIRAIQDQIPIMYPGCSVSFGYVQGVIIE
CCCCCCEEEEECCCHHHHHHHHHHEEECCCCCHHHHHHCCCEEECCCCCCHHHHEEEEEE
AQEQTALFNNTIPLANIESIAVDEMFSQGDPVLAGIDLDSGYLFSLSHETSRVGETWARV
ECHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCHHHHHHHHHHH
LNEAKEQGMEPKHVVKDGAKGITKGIEMTFDEIEQRDDAFHAVYLASKARLKLEHKAYRH
HHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHEEHHHHHHHHHHHHHHH
IAYEAHAVKKHLKASPENKRSVAKSLDWAKKKYADAIKRYTLAAQAVQKIRRAFCCINFK
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEC
SGELITLDAAQ
CCCEEEEECCC
>Mature Secondary Structure 
PILDRTRLAPSDKLHLLVKSFSCQAHGNITSLASDFSISRKAVYAARDAMQTALNALTQ
CCCCCCCCCCCCHHHHEEHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
DTREPNCIIRVGVDKSQLRRAIVALSITSANSIRAIQDQIPIMYPGCSVSFGYVQGVIIE
CCCCCCEEEEECCCHHHHHHHHHHEEECCCCCHHHHHHCCCEEECCCCCCHHHHEEEEEE
AQEQTALFNNTIPLANIESIAVDEMFSQGDPVLAGIDLDSGYLFSLSHETSRVGETWARV
ECHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCHHHHHHHHHHH
LNEAKEQGMEPKHVVKDGAKGITKGIEMTFDEIEQRDDAFHAVYLASKARLKLEHKAYRH
HHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHEEHHHHHHHHHHHHHHH
IAYEAHAVKKHLKASPENKRSVAKSLDWAKKKYADAIKRYTLAAQAVQKIRRAFCCINFK
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEC
SGELITLDAAQ
CCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA